Sequence Description Alias PCC hrr Cpa|evm.model.tig00020961.62 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component tig00020961_g16684.t1 0.9449399071018089 1 Cpa|evm.model.tig00000114.21 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor tig00000114_g6030.t1 0.926419531821535 2 Cpa|evm.model.tig00021432.35 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase tig00021432_g21227.t1 0.9160934868861332 3 Cpa|evm.model.tig00021319.4 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.aspartate transcarbamoylase tig00021319_g20199.t1 0.9074135571713335 4 Cpa|evm.model.tig00021168.21 RNA processing.RNA modification.rRNA/tRNA methylation.TRM1 tRNA guanosine-methyltransferase tig00021168_g19088.t1 0.9047943224227277 5 Cpa|evm.model.tig00020684.42 tig00020684_g12890.t1 0.901547240265996 6 Cpa|evm.model.tig00000571.5 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor tig00000571_g2156.t1 0.889148401762043 7 Cpa|evm.model.tig00000382.38 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.BOP1 component tig00000382_g24574.t1 0.8867198372849159 8 Cpa|evm.model.tig00000615.12 tig00000615_g2539.t1 0.882354766479019 9 Cpa|evm.model.tig00001428.2 tig00001428_g8719.t1 0.8755560614462224 10 Cpa|evm.model.tig00000113.111 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana tig00000113_g5693.t1 0.8731195969760678 11 Cpa|evm.model.tig00001278.11 RNA processing.RNA modification.rRNA/tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.TRM82 component tig00001278_g7990.t1 0.8714266833434253 15 Cpa|evm.model.tig00021127.176 tig00021127_g18859.t1 0.8712249893093921 13 Cpa|evm.model.tig00000553.10 RNA processing.RNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) RNA pseudouridylation complex.Nap57/CBF5 pseudouridine synthase component tig00000553_g2080.t1 0.869963732813612 14 Cpa|evm.model.tig00021525.7 tig00021525_g22123.t1 0.8663021830925337 15 Cpa|evm.model.tig00020693.9 tig00020693_g13015.t1 0.8567678387521691 16 Cpa|evm.model.tig00001493.9 tig00001493_g8984.t1 0.8536809025980601 17 Cpa|evm.model.tig00001073.20 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop56 snoRNP scaffold component tig00001073_g6828.t1 0.8505075089033414 18 Cpa|evm.model.tig00020848.30 Stromal processing peptidase, chloroplastic OS=Pisum sativum tig00020848_g14557.t1 0.8501193109669888 19 Cpa|evm.model.tig00000383.21 tig00000383_g24632.t1 0.8501043600595679 20 Cpa|evm.model.tig00000792.35 DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica tig00000792_g4187.t1 0.8464349823846455 21 Cpa|evm.model.tig00000388.46 tig00000388_g24807.t1 0.8440509707495613 23 Cpa|evm.model.tig00021108.10 tig00021108_g18300.t1 0.8422292421411576 23 Cpa|evm.model.tig00000852.39 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP4/PCN assembly factor tig00000852_g5050.t1 0.8358875484393975 29 Cpa|evm.model.tig00000880.2 tig00000880_g5161.t1 0.8331056732673157 25 Cpa|evm.model.tig00000571.29 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UPT6 assembly factor tig00000571_g2183.t1 0.8320687554764199 26 Cpa|evm.model.tig00000605.10 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor tig00000605_g2475.t1 0.830289179302278 27 Cpa|evm.model.tig00020562.25 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase tig00020562_g11151.t1 0.827779541419328 28 Cpa|evm.model.tig00000600.11 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Snu13 component tig00000600_g2270.t1 0.8274416337289769 29 Cpa|evm.model.tig00001049.16 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component tig00001049_g6665.t1 0.821554749272438 30 Cpa|evm.model.tig00021350.31 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop58 snoRNP scaffold component tig00021350_g20647.t1 0.8202979106465007 34 Cpa|evm.model.tig00021348.38 DNA-directed RNA polymerase I subunit 2 OS=Arabidopsis thaliana tig00021348_g20541.t1 0.8162828216772061 32 Cpa|evm.model.tig00021537.15 Ribose-phosphate pyrophosphokinase 1 OS=Spinacia oleracea tig00021537_g22271.t1 0.8152907265810603 34 Cpa|evm.model.tig00000605.11 rRNA biogenesis protein RRP5 OS=Arabidopsis thaliana tig00000605_g2478.t1 0.8124200454224522 43 Cpa|evm.model.tig00000123.23 tig00000123_g6930.t1 0.810029613851081 35 Cpa|evm.model.tig00001181.31 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase tig00001181_g7444.t1 0.8070636446895667 36 Cpa|evm.model.tig00020629.98 ABC transporter F family member 3 OS=Arabidopsis thaliana tig00020629_g12419.t1 0.8056592879426454 56 Cpa|evm.model.tig00000852.2 tig00000852_g5014.t1 0.805297899676569 38 Cpa|evm.model.tig00020723.108 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase tig00020723_g13518.t1 0.804479983974988 39 Cpa|evm.model.tig00021612.49 tig00021612_g22889.t1 0.7989176465492175 40 Cpa|evm.model.tig00000144.191 tig00000144_g9186.t1 0.796950449916365 41 Cpa|evm.model.tig00021348.51 tig00021348_g20554.t1 0.796918191841054 43 Cpa|evm.model.tig00000310.30 RNA processing.RNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) RNA pseudouridylation complex.Gar1 core component tig00000310_g23951.t1 0.7963509984410689 43 Cpa|evm.model.tig00021357.35 tig00021357_g20763.t1 0.7961215834646441 50 Cpa|evm.model.tig00020710.89 Protein translocation.mitochondrion.inner mitochondrion membrane TIM22 insertion system.Tim9 component tig00020710_g13354.t1 0.7949400430291234 45 Cpa|evm.model.tig00000076.129 tig00000076_g2424.t1 0.7938261140856332 46 Cpa|evm.model.tig00021348.37 DNA-directed RNA polymerase I subunit 2 OS=Arabidopsis thaliana tig00021348_g20540.t1 0.7929192113715219 47 Cpa|evm.model.tig00000144.75 tig00000144_g9066.t1 0.7921996936230027 49 Cpa|evm.model.tig00001310.11 tig00001310_g8161.t1 0.791213069336378 49 Cpa|evm.model.tig00021319.3 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.carbamoyl phosphate synthetase dimer.small subunit tig00021319_g20198.t1 0.7882350958581531 50 Cpa|evm.model.tig00021108.9 tig00021108_g18299.t1 0.7878600522467946 61 Cpa|evm.model.tig00000241.158 Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica tig00000241_g21024.t1 0.7878403866798447 61 Cpa|evm.model.tig00020943.85 DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica tig00020943_g16324.t1 0.785719085852026 67 Cpa|evm.model.tig00000821.31 tig00000821_g4491.t1 0.7857062845544854 54 Cpa|evm.model.tig00000403.82 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REA1 assembly factor (MDN1) tig00000403_g342.t1 0.7843507847504735 55 Cpa|evm.model.tig00000405.29 tig00000405_g461.t1 0.7812729163839108 56 Cpa|evm.model.tig00020848.22 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor tig00020848_g14549.t1 0.781198954029852 57 Cpa|evm.model.tig00000553.15 tig00000553_g2086.t1 0.7793983996104387 58 Cpa|evm.model.tig00020675.101 tig00020675_g12683.t1 0.7790759171813388 59 Cpa|evm.model.tig00001206.16 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS1 rRNA removal.BRX1 assembly factor tig00001206_g7501.t1 0.774513810087944 60 Cpa|evm.model.tig00020710.44 tig00020710_g13277.t1 0.7739133528634492 93 Cpa|evm.model.tig00020544.5 DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica tig00020544_g10485.t2 0.7736846588476356 69 Cpa|evm.model.tig00000388.55 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 112.3) & Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp. indica tig00000388_g24816.t1 0.7733408839000212 63 Cpa|evm.model.tig00000655.55 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP4 component tig00000655_g2884.t1 0.7722724072891166 64 Cpa|evm.model.tig00020927.23 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.SWA1 assembly factor tig00020927_g15952.t1 0.7714366753430355 65 Cpa|evm.model.tig00000144.74 Notchless protein homolog OS=Arabidopsis thaliana tig00000144_g9065.t1 0.769628173478939 66 Cpa|evm.model.tig00000383.51 ABC transporter F family member 1 OS=Arabidopsis thaliana tig00000383_g24665.t1 0.7677942787769007 67 Cpa|evm.model.tig00000498.93 tig00000498_g1673.t1 0.7665891387214956 68 Cpa|evm.model.tig00020927.46 tig00020927_g15976.t1 0.7627132917128298 69 Cpa|evm.model.tig00021293.22 tig00021293_g20014.t1 0.7612290375026525 71 Cpa|evm.model.tig00001130.17 tig00001130_g7246.t1 0.7608567251615065 72 Cpa|evm.model.tig00000237.11 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii tig00000237_g20460.t1 0.7606442397378957 74 Cpa|evm.model.tig00021179.21 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Rrp9/YAO1 assembly factor tig00021179_g19236.t1 0.7600932838725313 77 Cpa|evm.model.tig00020912.51 Peter Pan-like protein OS=Arabidopsis thaliana tig00020912_g15823.t1 0.7574984359686995 75 Cpa|evm.model.tig00000769.35 WD repeat-containing protein 55 OS=Arabidopsis thaliana tig00000769_g4032.t1 0.7569703460692643 76 Cpa|evm.model.tig00021464.39 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor tig00021464_g21745.t1 0.7569027157445609 77 Cpa|evm.model.tig00000405.63 Ammonium transporter 3 member 3 OS=Oryza sativa subsp. japonica tig00000405_g494.t1 0.7527925417454462 79 Cpa|evm.model.tig00000478.22 0.7526024433515155 80 Cpa|evm.model.tig00020734.25 DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana tig00020734_g13581.t1 0.7491682955514647 82 Cpa|evm.model.tig00001437.7 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.formylglycinamidine RN synthase tig00001437_g8743.t1 0.7455519643134695 84 Cpa|evm.model.tig00000632.10 tig00000632_g2745.t1 0.7440161264843478 85 Cpa|evm.model.tig00000396.7 tig00000396_g24878.t1 0.7411758360344414 86 Cpa|evm.model.tig00020825.12 tig00020825_g14292.t1 0.7335882160065406 93 Cpa|evm.model.tig00001001.11 RNA processing.RNA modification.rRNA/tRNA methylation.TRM5 tRNA guanosine-methyltransferase tig00001001_g6201.t1 0.7313675881623342 95 Cpa|evm.model.tig00000663.67 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00000663_g3000.t1 0.7311144144109628 96 Cpa|evm.model.tig00021348.31 Nucleotide metabolism.purines.salvage pathway.IMP dehydrogenase tig00021348_g20534.t1 0.7291744123834765 97 Cpa|evm.model.tig00022075.42 ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana tabacum tig00022075_g23603.t1 0.7279485486970914 98 Cpa|evm.model.tig00000403.80 tig00000403_g340.t1 0.7259458409315303 99 Cpa|evm.model.tig00020710.40 tig00020710_g13274.t1 0.7258954224813218 100