Sequence Description Alias PCC hrr Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component tig00000912_g5422.t1 0.9510623490724774 1 Cpa|evm.model.tig00001206.10 Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana tig00001206_g7494.t1 0.9333542723847194 3 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.9317317477091098 18 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.9292290439507156 9 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase tig00001107_g7096.t1 0.9265424819321081 7 Cpa|evm.model.tig00000829.11 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana tig00000829_g4654.t1 0.9251597053292715 6 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.9249533275112781 14 Cpa|evm.model.tig00021589.1 tig00021589_g22707.t1 0.9226224684670918 15 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.91785399285517 9 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.912606494469859 10 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana tig00021464_g21723.t1 0.9113058202845332 11 Cpa|evm.model.tig00021433.27 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component tig00021433_g21279.t1 0.9104471297202151 12 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.9098809428503305 18 Cpa|evm.model.tig00022075.25 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase tig00022075_g23589.t1 0.9092886106359894 14 Cpa|evm.model.tig00001372.8 0.9082991880363629 15 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.9032092442835934 60 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.9001025773884426 32 Cpa|evm.model.tig00000241.32 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component tig00000241_g20890.t1 0.8999886257535721 18 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase tig00001234_g7732.t1 0.8992662852382152 35 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.8964137094162741 41 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor tig00000829_g4659.t1 0.8964006035992614 29 Cpa|evm.model.tig00000144.174 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana tig00000144_g9167.t1 0.8956303420226217 22 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component tig00000829_g4645.t1 0.8946914145468462 23 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.8944375916666093 34 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase tig00020553_g10634.t1 0.8941989112039145 28 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.8936267905865198 31 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00020918_g15889.t1 0.893521337325886 65 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.8934458188316805 28 Cpa|evm.model.tig00000388.25 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component tig00000388_g24787.t1 0.8932257521086916 29 Cpa|evm.model.tig00021433.16 tig00021433_g21270.t1 0.8921842542905799 30 Cpa|evm.model.tig00001292.18 Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana tig00001292_g8051.t1 0.8910894053624854 31 Cpa|evm.model.tig00021046.12 tig00021046_g17792.t1 0.88931171647702 32 Cpa|evm.model.tig00000789.45 tig00000789_g4139.t1 0.8889999258605248 33 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00021357_g20757.t1 0.8883337006204045 42 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.886841799806156 62 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8862046767432038 58 Cpa|evm.model.tig00000194.46 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase tig00000194_g14774.t1 0.8855875186264488 37 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.8850443447376698 81 Cpa|evm.model.tig00021348.92 Obg-like ATPase 1 OS=Arabidopsis thaliana tig00021348_g20599.t1 0.8846525115341622 39 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana tig00000144_g9159.t1 0.88451742340509 75 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor tig00000704_g3350.t1 0.8844663132443387 41 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.8833922695568674 45 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana tig00020544_g10489.t1 0.8814214841416694 44 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component tig00021435_g21391.t1 0.8789840637714255 45 Cpa|evm.model.tig00000383.37 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia tig00000383_g24647.t1 0.8756326469069355 46 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein tig00001229_g7846.t1 0.8755857591757382 47 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.875111625892728 63 Cpa|evm.model.tig00000852.50 Secondary metabolism.terpenoids.mevalonate pathway.farnesyl diphosphate synthase tig00000852_g5057.t1 0.8745535935538514 49 Cpa|evm.model.tig00000983.12 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase tig00000983_g5903.t1 0.8737017454765716 50 Cpa|evm.model.tig00000203.14 tig00000203_g17117.t1 0.8721777445945574 72 Cpa|evm.model.tig00000194.23 tig00000194_g14751.t1 0.8706726123518331 63 Cpa|evm.model.tig00021073.34 tig00021073_g18041.t1 0.8705145887276714 53 Cpa|evm.model.tig00021319.34 tig00021319_g20228.t1 0.8694749150616496 54 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana tig00020684_g12880.t1 0.869379615678672 55 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana tig00000076_g2403.t1 0.8687591460511472 56 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.8687379386227667 63 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component tig00000402_g218.t1 0.8678185725229888 58 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component tig00021348_g20598.t1 0.8675605867814683 59 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer tig00000989_g6085.t1 0.8665772765984217 80 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component tig00022075_g23612.t1 0.8658560747479858 62 Cpa|evm.model.tig00000037.37 Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate dehydratase tig00000037_g10105.t1 0.8654089961664552 62 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.8643279858327121 99 Cpa|evm.model.tig00020684.43 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component tig00020684_g12891.t1 0.8629863920713523 67 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana tig00001003_g6291.t1 0.8607172137660936 67 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica tig00020684_g12886.t1 0.859572407888859 68 Cpa|evm.model.tig00020553.160 tig00020553_g10652.t1 0.8571096204168219 70 Cpa|evm.model.tig00001049.17 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (DCN1) tig00001049_g6666.t1 0.8563770357258816 71 Cpa|evm.model.tig00000704.53 SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana tig00000704_g3340.t1 0.8561308524346319 72 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component tig00000037_g10102.t1 0.8543216240074117 74 Cpa|evm.model.tig00000076.104 tig00000076_g2402.t1 0.8538077122591754 75 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.8528810034934953 76 Cpa|evm.model.tig00020554.52 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst tig00020554_g10834.t1 0.8525934871438726 77 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.8514572227428642 95 Cpa|evm.model.tig00001029.17 tig00001029_g6416.t1 0.8514324435210842 80 Cpa|evm.model.tig00020554.145 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana tig00020554_g10922.t1 0.8510683750934894 81 Cpa|evm.model.tig00001372.3 tig00001372_g8455.t1 0.8507579063246945 82 Cpa|evm.model.tig00000718.35 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose synthesis.UDP-D-glucuronic acid decarboxylase tig00000718_g3710.t1 0.8507528727824377 83 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.850248011372526 98 Cpa|evm.model.tig00020554.12 tig00020554_g10798.t1 0.8495262965036984 87 Cpa|evm.model.tig00021352.37 CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana tig00021352_g20706.t1 0.8483281319058918 90 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.847508922077725 93 Cpa|evm.model.tig00000944.23 Protein degradation.peptide tagging.Homologous-to-Ubiquitin (HUB)-anchor addition.HUB ubiquitin-fold protein tig00000944_g5946.t1 0.8468031284172561 94 Cpa|evm.model.tig00020554.53 tig00020554_g10834.t1 0.8461217307100865 96 Cpa|evm.model.tig00021352.66 tig00021352_g20733.t1 0.846103615324998 97 Cpa|evm.model.tig00000704.62 tig00000704_g3346.t2 0.8458176128983297 98 Cpa|evm.model.tig00000704.42 tig00000704_g3329.t1 0.8450554343255218 99 Cpa|evm.model.tig00021464.35 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.beta subunit tig00021464_g21740.t1 0.8446220365825282 100