Sequence Description Alias PCC hrr Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component tig00020553_g10636.t1 0.9521973890194377 1 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component tig00021612_g22890.t1 0.9481864488930697 2 Cpa|evm.model.tig00021589.1 tig00021589_g22707.t1 0.9437021276928854 3 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.9399027018323274 11 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component tig00022075_g23621.t1 0.9394385774974298 6 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana tig00000912_g5433.t1 0.9378928750880977 6 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00020918_g15889.t1 0.9369084834553624 7 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.9351539963216552 13 Cpa|evm.model.tig00020848.76 0.9327991239416005 9 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase tig00000829_g4671.t1 0.9301599455158094 10 Cpa|evm.model.tig00000789.46 tig00000789_g4140.t1 0.9298716746340132 11 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.9278052601610408 12 Cpa|evm.model.tig00020544.4 tig00020544_g10484.t1 0.9270247004999661 13 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.9253434524916377 14 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii tig00000912_g5414.t1 0.9246708225692953 21 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.9243965908716579 16 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.9243774572731579 17 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.9217402066655719 18 Cpa|evm.model.tig00021319.61 tig00021319_g20254.t1 0.9215900312682649 19 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.917791947482089 20 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.914991248259931 32 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component tig00000217_g19159.t1 0.9146242283219762 22 Cpa|evm.model.tig00001049.12 tig00001049_g6662.t1 0.9128395045965108 23 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase tig00000912_g5432.t1 0.9126212774541201 24 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component tig00021319_g20258.t1 0.9123320926141499 29 Cpa|evm.model.tig00021348.94 tig00021348_g20601.t1 0.9116863697370131 26 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.9111100140507126 27 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.9095466067372999 31 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.9077926409388267 29 Cpa|evm.model.tig00020848.78 tig00020848_g14607.t1 0.9066752728330228 30 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein tig00020553_g10655.t1 0.9060211564866828 31 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.9059225148338351 32 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component tig00000704_g3335.t1 0.9055726070936814 33 Cpa|evm.model.tig00020553.154 tig00020553_g10645.t1 0.905242817893904 34 Cpa|evm.model.tig00020531.35 tig00020531_g10036.t2 0.9051564666243862 35 Cpa|evm.model.tig00000241.178 Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD2 component tig00000241_g21049.t1 0.9049645274954926 36 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component tig00000912_g5422.t1 0.9046740200333409 37 Cpa|evm.model.tig00000194.20 tig00000194_g14748.t1 0.9029461630998552 38 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.9014916930559383 39 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.9011396795383496 47 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase tig00001234_g7732.t1 0.9007393712745151 41 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase tig00001107_g7096.t1 0.9000202239661165 42 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer tig00000989_g6085.t1 0.8992874216878765 43 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component tig00022075_g23612.t1 0.8978964295988703 44 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit tig00000789_g4131.t1 0.8976353963699479 45 Cpa|evm.model.tig00001107.6 tig00001107_g7093.t1 0.897412267303393 46 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.896984177703273 47 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.8966048181685302 48 Cpa|evm.model.tig00000912.18 tig00000912_g5423.t1 0.8962515981275879 49 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.8960135966396949 50 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.8953444552649402 51 Cpa|evm.model.tig00021464.58 tig00021464_g21761.t1 0.8953011130126317 52 Cpa|evm.model.tig00000829.24 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component tig00000829_g4665.t1 0.8948925435085846 53 Cpa|evm.model.tig00000076.93 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component tig00000076_g2391.t1 0.892522816858149 54 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit tig00020903_g15096.t1 0.8924307394590524 55 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000350_g24328.t1 0.8922455493651626 56 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.8910690195050723 57 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component tig00000350_g24315.t1 0.8906028379565741 58 Cpa|evm.model.tig00001107.5 tig00001107_g7093.t1 0.8904791051435201 76 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component tig00000829_g4645.t1 0.8897169494814983 60 Cpa|evm.model.tig00001187.15 tig00001187_g7464.t1 0.8891098937251783 61 Cpa|evm.model.tig00000852.43 tig00000852_g5052.t1 0.8890185534969662 62 Cpa|evm.model.tig00001372.8 0.8887633178898741 63 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.8884035622065204 64 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.8882988617916113 65 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.888237126001635 66 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.8880212615630181 67 Cpa|evm.model.tig00000704.70 Intraflagellar transport protein 81 OS=Chlamydomonas reinhardtii tig00000704_g3354.t1 0.8877469846232164 68 Cpa|evm.model.tig00000525.9 tig00000525_g1952.t1 0.8874523667198758 69 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase tig00020553_g10634.t1 0.8868693889035874 70 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.886142943698622 71 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.885641879316071 72 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.8852220266383432 73 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.8849464467914703 74 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase tig00000203_g17139.t1 0.88451742340509 75 Cpa|evm.model.tig00022075.57 Chaperone protein dnaJ 6 OS=Arabidopsis thaliana tig00022075_g23618.t1 0.8840855657698339 76 Cpa|evm.model.tig00021590.4 tig00021590_g22761.t1 0.8837627916530817 77 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana tig00020554_g10934.t2 0.8830391131613688 78 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.8828460321194672 79 Cpa|evm.model.tig00000980.5 tig00000980_g6130.t1 0.8818676742948222 80 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.8811424970274384 81 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.8807952497082548 82 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component tig00021357_g20735.t1 0.8805903227997053 83 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.880285462955549 84 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.8800364760053949 85 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides tig00020531_g10062.t1 0.8798227910053075 86 Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 0.8796903927413179 87 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8796118500984031 88 Cpa|evm.model.tig00001206.10 Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana tig00001206_g7494.t1 0.8794168147071912 89 Cpa|evm.model.tig00022075.35 tig00022075_g23597.t1 0.8784066261704286 90 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.8777249625064434 91 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.8774448360397158 92 Cpa|evm.model.tig00000076.52 tig00000076_g2352.t1 0.8773308141099765 93 Cpa|evm.model.tig00021319.35 tig00021319_g20229.t1 0.876484537895729 94 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor tig00000829_g4659.t1 0.8761701843420169 95 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.8757349761903305 96 Cpa|evm.model.tig00000157.110 Cullin-4 OS=Arabidopsis thaliana tig00000157_g9709.t1 0.8752606078561648 97 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component tig00020554_g10917.t1 0.8741475197195983 98 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.8739999076390628 99 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8733075789374298 100