Sequence Description Alias PCC hrr Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.9340709756981999 1 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component tig00021348_g20598.t1 0.9123159893063801 2 Cpa|evm.model.tig00001049.13 tig00001049_g6663.t1 0.9110101220826955 7 Cpa|evm.model.tig00000980.9 Intraflagellar transport protein 25 OS=Chlamydomonas reinhardtii tig00000980_g6133.t1 0.9017188770652027 12 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.9008578848585901 34 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.8954664130166082 24 Cpa|evm.model.tig00000863.20 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component tig00000863_g4975.t1 0.894113684268624 24 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein tig00001229_g7846.t1 0.8938206628405431 8 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3326.t1 0.8922647083868498 12 Cpa|evm.model.tig00000704.52 Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana tig00000704_g3339.t1 0.8910977052960586 10 Cpa|evm.model.tig00021319.61 tig00021319_g20254.t1 0.8848890974968122 43 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.8848179903582812 39 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.8820316504045226 28 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.8809001012958756 76 Cpa|evm.model.tig00001284.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component tig00001284_g8011.t1 0.8808602096757525 45 Cpa|evm.model.tig00020554.142 NAP1-related protein 2 OS=Oryza sativa subsp. japonica tig00020554_g10921.t1 0.876982681077611 35 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8766486770325821 56 Cpa|evm.model.tig00021234.20 tig00021234_g19394.t1 0.8720575316745163 19 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component tig00000944_g5943.t1 0.869465264963952 49 Cpa|evm.model.tig00000829.24 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component tig00000829_g4665.t1 0.8690852856886164 52 Cpa|evm.model.tig00020554.27 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.RBL component tig00020554_g10812.t1 0.8683337707881712 26 Cpa|evm.model.tig00020539.41 tig00020539_g10434.t1 0.8680827967518654 49 Cpa|evm.model.tig00020909.31 Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana tig00020909_g15353.t1 0.8673679368600605 28 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8670835585963415 91 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component tig00000912_g5422.t1 0.8665487583711201 67 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component tig00000704_g3335.t1 0.8664395505830069 76 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein tig00000042_g15484.t1 0.8656154377720716 38 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.8644638995046311 97 Cpa|evm.model.tig00020903.15 tig00020903_g15083.t1 0.8643465062332855 40 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.8643026279227949 80 Cpa|evm.model.tig00000857.6 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.P23 Hsp90-co-chaperone tig00000857_g4927.t1 0.8635883333612463 75 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component tig00020553_g10649.t1 0.862167198332283 70 Cpa|evm.model.tig00000144.7 tig00000144_g8997.t1 0.8604657853810261 37 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.8580630989445989 86 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.8578957160983609 78 Cpa|evm.model.tig00001029.17 tig00001029_g6416.t1 0.8553301970298727 53 Cpa|evm.model.tig00000704.36 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3324.t1 0.8545136345593566 46 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component tig00000217_g19159.t1 0.8535865197105745 77 Cpa|evm.model.tig00001249.11 tig00001249_g7782.t1 0.8526566321511568 50 Cpa|evm.model.tig00020614.39 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.Rad54 chromatin remodeling factor tig00020614_g12152.t1 0.8510438474079246 68 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana tig00021464_g21723.t1 0.8503214328899356 71 Cpa|evm.model.tig00021319.60 tig00021319_g20253.t1 0.8474265968316201 73 Cpa|evm.model.tig00000663.16 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm2 component tig00000663_g2949.t1 0.8471086146006238 66 Cpa|evm.model.tig00000632.12 tig00000632_g2747.t2 0.8465327393461243 62 Cpa|evm.model.tig00001424.6 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.PYM component tig00001424_g8705.t1 0.8460361001848179 63 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein tig00000144_g9007.t1 0.8440757987093419 78 Cpa|evm.model.tig00001093.5 tig00001093_g6880.t1 0.8438771803255262 80 Cpa|evm.model.tig00021123.29 tig00021123_g18513.t1 0.843308858568523 68 Cpa|evm.model.tig00001021.6 tig00001021_g6303.t1 0.8431000997348415 70 Cpa|evm.model.tig00000076.93 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component tig00000076_g2391.t1 0.8425221459938094 71 Cpa|evm.model.tig00021357.30 tig00021357_g20759.t1 0.8411407691557192 73 Cpa|evm.model.tig00020830.7 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF5 GTPase activating factor tig00020830_g14388.t1 0.8393405475505068 79 Cpa|evm.model.tig00020538.70 tig00020538_g10376.t1 0.8371004115276948 83 Cpa|evm.model.tig00001085.15 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP14 component tig00001085_g6955.t1 0.8349880693349748 93 Cpa|evm.model.tig00000076.104 tig00000076_g2402.t1 0.8324163031922136 92 Cpa|evm.model.tig00020554.23 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 10 tig00020554_g10808.t1 0.8317744842725951 95 Cpa|evm.model.tig00020848.18 snRNA-activating protein complex subunit OS=Arabidopsis thaliana tig00020848_g14545.t1 0.8291178764961676 99