Sequence Description Alias PCC hrr Cpa|evm.model.tig00001229.22 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana tig00001229_g7856.t1 0.9183229545741048 5 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana tig00000704_g3341.t1 0.914820253460182 6 Cpa|evm.model.tig00000989.8 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase tig00000989_g6082.t1 0.9122831586954662 3 Cpa|evm.model.tig00000388.24 tig00000388_g24785.t1 0.9017026721201744 12 Cpa|evm.model.tig00001029.14 tig00001029_g6412.t1 0.9006052626637285 6 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component tig00020909_g15357.t1 0.8975452140868014 24 Cpa|evm.model.tig00020610.18 GTP-binding protein yptV1 OS=Volvox carteri tig00020610_g11956.t1 0.8862887599748333 7 Cpa|evm.model.tig00001094.30 Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica tig00001094_g7002.t1 0.88264397066762 23 Cpa|evm.model.tig00020538.71 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component tig00020538_g10377.t1 0.8817061547767387 23 Cpa|evm.model.tig00000342.29 Protein degradation.peptidase families.cysteine-type peptidase activities.SUMO-specific protease families.ULP1 protease tig00000342_g24214.t1 0.8768153294032137 10 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.8764938752297001 66 Cpa|evm.model.tig00000388.34 tig00000388_g24796.t1 0.8746314846697147 24 Cpa|evm.model.tig00020848.42 tig00020848_g14571.t1 0.8738602443439033 13 Cpa|evm.model.tig00020610.43 tig00020610_g11983.t1 0.8723639279492152 35 Cpa|evm.model.tig00000863.11 Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica tig00000863_g4965.t1 0.871827443634142 31 Cpa|evm.model.tig00021464.16 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component tig00021464_g21722.t1 0.8716207432790067 51 Cpa|evm.model.tig00000203.30 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud13 component tig00000203_g17137.t1 0.8698581367458919 32 Cpa|evm.model.tig00001286.15 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein tig00001286_g8031.t1 0.8679566523349538 19 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.8634982486343872 95 Cpa|evm.model.tig00000158.111 tig00000158_g10213.t1 0.8634303750819743 29 Cpa|evm.model.tig00001229.23 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana tig00001229_g7858.t1 0.8632355964371863 28 Cpa|evm.model.tig00000849.25 tig00000849_g4765.t1 0.862572082982315 23 Cpa|evm.model.tig00000863.32 tig00000863_g4986.t1 0.8617038346608006 24 Cpa|evm.model.tig00001532.8 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF11 component tig00001532_g9275.t1 0.8612148855873587 26 Cpa|evm.model.tig00000241.37 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4 tig00000241_g20895.t1 0.8589479907308444 59 Cpa|evm.model.tig00000402.27 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component tig00000402_g205.t1 0.8569119456700182 53 Cpa|evm.model.tig00001155.21 Intraflagellar transport protein 27 OS=Chlamydomonas reinhardtii tig00001155_g7328.t1 0.855462700588945 30 Cpa|evm.model.tig00001487.15 tig00001487_g8944.t1 0.8535283423843026 41 Cpa|evm.model.tig00000319.20 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).SNU23 component tig00000319_g24132.t1 0.8525393129314839 33 Cpa|evm.model.tig00020684.33 RNA biosynthesis.transcriptional activation.CPP1-like transcription factor tig00020684_g12882.t1 0.8522738178254805 57 Cpa|evm.model.tig00020780.13 tig00020780_g13765.t1 0.8520363411335258 69 Cpa|evm.model.tig00000663.50 tig00000663_g2983.t1 0.8515827428058945 36 Cpa|evm.model.tig00020564.33 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase acting on acid anhydride(50.3.6 : 95.2) tig00020564_g11433.t1 0.8512447788701586 38 Cpa|evm.model.tig00000704.31 0.8510740239247504 39 Cpa|evm.model.tig00000217.31 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor tig00000217_g19165.t1 0.8506741794673964 40 Cpa|evm.model.tig00000711.34 tig00000711_g3397.t1 0.8503197206495361 41 Cpa|evm.model.tig00001130.29 tig00001130_g7259.t1 0.8496974586707602 42 Cpa|evm.model.tig00021589.5 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component tig00021589_g22710.t1 0.8487770766838335 43 Cpa|evm.model.tig00000711.24 tig00000711_g3384.t1 0.847722507639873 44 Cpa|evm.model.tig00001038.19 tig00001038_g6528.t1 0.8474253246699889 45 Cpa|evm.model.tig00000241.160 tig00000241_g21025.t1 0.8468612710239137 54 Cpa|evm.model.tig00021612.34 tig00021612_g22877.t1 0.8466380276468833 89 Cpa|evm.model.tig00001371.6 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK3 kinase tig00001371_g8422.t1 0.8450606778415125 59 Cpa|evm.model.tig00020538.61 tig00020538_g10368.t1 0.844939886409986 50 Cpa|evm.model.tig00021433.26 Cell cycle.regulation.cyclins.CYCT-type cyclin tig00021433_g21278.t1 0.8443050963986062 76 Cpa|evm.model.tig00000704.26 tig00000704_g3315.t1 0.8442094076960633 53 Cpa|evm.model.tig00021357.15 tig00021357_g20748.t1 0.8430979215492036 53 Cpa|evm.model.tig00020531.48 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm7 component tig00020531_g10054.t1 0.8422641937774717 58 Cpa|evm.model.tig00001604.7 tig00001604_g9411.t1 0.8414729998591773 58 Cpa|evm.model.tig00021493.39 tig00021493_g21884.t1 0.8410531506177905 61 Cpa|evm.model.tig00000525.12 Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus tig00000525_g1955.t1 0.8405194639538973 76 Cpa|evm.model.tig00000704.62 tig00000704_g3346.t2 0.8392581818414513 91 Cpa|evm.model.tig00000852.8 ADP-ribosylation factor-like protein 3 OS=Chlamydomonas reinhardtii tig00000852_g5021.t1 0.8383722540292898 66 Cpa|evm.model.tig00000402.35 tig00000402_g213.t1 0.837536592491438 87 Cpa|evm.model.tig00021234.23 Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana tig00021234_g19397.t1 0.8371532384383322 91 Cpa|evm.model.tig00021043.13 tig00021043_g17622.t1 0.8371382571497437 71 Cpa|evm.model.tig00021234.24 tig00021234_g19398.t1 0.8346179821241232 75 Cpa|evm.model.tig00020556.31 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase tig00020556_g10999.t1 0.8338530092430775 92 Cpa|evm.model.tig00020537.64 tig00020537_g10289.t1 0.8331333523744384 78 Cpa|evm.model.tig00020554.141 tig00020554_g10920.t1 0.8300722640039347 85 Cpa|evm.model.tig00000144.167 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.SPT3/TAF13 component tig00000144_g9160.t1 0.8297876208312427 86 Cpa|evm.model.tig00000829.22 Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana tig00000383_g24675.t1 0.8295348171722888 88 Cpa|evm.model.tig00021365.9 tig00021365_g20822.t1 0.8289676924016295 91 Cpa|evm.model.tig00000792.7 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) tig00000792_g4156.t1 0.8285918406246511 94 Cpa|evm.model.tig00001428.10 tig00001428_g8729.t1 0.8275298917169456 96 Cpa|evm.model.tig00000342.3 tig00000342_g24191.t1 0.827429680092221 97 Cpa|evm.model.tig00021135.24 tig00021135_g18946.t1 0.8273340418866888 98 Cpa|evm.model.tig00000449.18 tig00000449_g945.t1 0.8267500589854768 99