Sequence Description Alias PCC hrr Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.9628324720765112 3 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.9490801622640429 11 Cpa|evm.model.tig00020614.73 tig00020614_g12187.t1 0.9438337267622787 8 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.9432967112917817 11 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.9417855886730269 17 Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.9393830180193766 10 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9348915514923802 24 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.9340860316590216 30 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.9336652938494259 9 Cpa|evm.model.tig00001729.6 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter tig00001729_g9740.t1 0.9317578806974405 10 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana tig00020592_g11633.t1 0.9267269699494292 12 Cpa|evm.model.tig00000889.39 tig00000889_g5332.t1 0.9261351948942117 12 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9256368797815484 20 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.9247754147725153 17 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9246741425032492 21 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.9244433518591588 16 Cpa|evm.model.tig00000219.71 Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana tig00000219_g19507.t1 0.9211815111832333 17 Cpa|evm.model.tig00000802.18 tig00000802_g4269.t1 0.9203088756885945 18 Cpa|evm.model.tig00001065.21 tig00001065_g6722.t1 0.917195913013311 19 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.9162953715630081 22 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.9162376899818585 24 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.9139139917031336 46 Cpa|evm.model.tig00021464.19 tig00021464_g21725.t1 0.9115515639602401 23 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.9096108045858171 30 Cpa|evm.model.tig00021179.40 Carotenoid cleavage dioxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica tig00021179_g19254.t1 0.9083626780527899 25 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.9076959671572119 38 Cpa|evm.model.tig00000821.11 tig00000821_g4470.t1 0.9076607142606286 27 Cpa|evm.model.tig00000718.2 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.9052520142105558 28 Cpa|evm.model.tig00000981.5 tig00000981_g5860.t1 0.9046181891298902 29 Cpa|evm.model.tig00000073.69 tig00000073_g1752.t1 0.9034591763997589 30 Cpa|evm.model.tig00000076.165 tig00000076_g2456.t1 0.9004411259190923 31 Cpa|evm.model.tig00000718.3 ABC transporter C family member 6 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8980930161992269 32 Cpa|evm.model.tig00020952.7 ABC transporter B family member 2 OS=Arabidopsis thaliana tig00020952_g16473.t1 0.8969739392203072 33 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.8963873265340832 54 Cpa|evm.model.tig00021126.3 ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana tig00021126_g18456.t1 0.8954985990852364 35 Cpa|evm.model.tig00000760.8 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000760_g3929.t1 0.8948639338036279 36 Cpa|evm.model.tig00000169.33 tig00000169_g11905.t1 0.8945038576692084 37 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.8938169704039951 38 Cpa|evm.model.tig00000459.97 tig00000459_g1161.t1 0.8904720766517713 39 Cpa|evm.model.tig00021035.15 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00021035_g17247.t1 0.8901942840371002 40 Cpa|evm.model.tig00000403.33 tig00000403_g289.t1 0.8894526423952459 41 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.8892038943516477 50 Cpa|evm.model.tig00000361.1 tig00000361_g24355.t1 0.8885724580511125 43 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.8876610310956653 48 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.8874587876391656 75 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.8868449057058768 75 Cpa|evm.model.tig00000754.3 tig00000754_g3886.t1 0.8868372718270104 47 Cpa|evm.model.tig00020830.55 tig00020830_g14438.t1 0.8867601788261463 48 Cpa|evm.model.tig00000391.2 DNA damage response.DNA repair mechanisms.photoreactivation.6-4-type photolyase (UVR3) tig00000391_g24833.t1 0.8864372394791257 49 Cpa|evm.model.tig00000204.70 tig00000204_g17737.t1 0.8837672738994413 50 Cpa|evm.model.tig00001086.15 tig00001086_g6850.t1 0.8833324583271269 63 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.8808377253094211 55 Cpa|evm.model.tig00001095.9 Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana tig00001095_g7025.t1 0.8802312693467236 54 Cpa|evm.model.tig00000248.21 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana tig00000248_g21787.t1 0.8797842236522612 55 Cpa|evm.model.tig00001525.4 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00001525_g9233.t1 0.8797370929008731 56 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.8792692692285893 73 Cpa|evm.model.tig00021350.15 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica tig00021350_g20632.t1 0.8781093252692597 58 Cpa|evm.model.tig00001024.2 ABC transporter C family member 14 OS=Arabidopsis thaliana tig00001729_g9740.t1 0.8774204256267115 60 Cpa|evm.model.tig00000981.19 tig00000981_g5873.t1 0.8747889463993449 61 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.8745946684331481 96 Cpa|evm.model.tig00000093.128 tig00000093_g3556.t1 0.87440168592494 63 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.8736449452582206 71 Cpa|evm.model.tig00001229.8 tig00001229_g7840.t1 0.8736381610912465 65 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8731876659791595 66 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor tig00020943_g16313.t1 0.8730733387350322 67 Cpa|evm.model.tig00001093.1 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana tig00001093_g6876.t1 0.8728391998837766 68 Cpa|evm.model.tig00000551.6 tig00000551_g2028.t1 0.872483507999776 92 Cpa|evm.model.tig00000692.49 tig00000692_g3245.t1 0.8724629541890981 70 Cpa|evm.model.tig00001033.3 tig00001033_g6484.t1 0.8717341199718078 71 Cpa|evm.model.tig00000430.44 tig00000430_g633.t1 0.8694868243220358 72 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.869310581709823 92 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca tig00000863_g5002.t1 0.8689162161038019 74 Cpa|evm.model.tig00020943.67 Enzyme classification.EC_1 oxidoreductases.EC_1.6 oxidoreductase acting on NADH or NADPH(50.1.6 : 384.6) & NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana tig00020943_g16307.t1 0.8685985432973662 75 Cpa|evm.model.tig00020553.191 ABC transporter C family member 11 OS=Arabidopsis thaliana tig00020553_g10681.t1 0.8682223597885268 76 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.868151487965575 93 Cpa|evm.model.tig00000857.23 tig00000857_g4949.t1 0.8681299304429358 78 Cpa|evm.model.tig00020848.14 tig00020848_g14540.t1 0.864953275283234 80 Cpa|evm.model.tig00020675.1 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase tig00020675_g12579.t1 0.8628677159727859 82 Cpa|evm.model.tig00020801.92 tig00020801_g13974.t1 0.8628631845527521 83 Cpa|evm.model.tig00020553.276 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) tig00020553_g10760.t1 0.8627877526036032 84 Cpa|evm.model.tig00000042.43 Histidine kinase 3 OS=Arabidopsis thaliana tig00000042_g15436.t1 0.8627341420995945 85 Cpa|evm.model.tig00021517.27 tig00021517_g22015.t1 0.8620511654307129 86 Cpa|evm.model.tig00021616.18 tig00021616_g22923.t1 0.8617104455788669 87 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.8614914635497215 97 Cpa|evm.model.tig00020801.91 tig00020801_g13974.t1 0.8612085394355521 90 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.8611404223667847 91 Cpa|evm.model.tig00000254.123 tig00000254_g22583.t1 0.8597699704046118 93 Cpa|evm.model.tig00000344.14 0.8597614216810778 94 Cpa|evm.model.tig00000900.16 Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana tig00000900_g5370.t1 0.8585789705306748 95 Cpa|evm.model.tig00000796.16 tig00000796_g4238.t1 0.8583303054371628 96 Cpa|evm.model.tig00020941.46 tig00020941_g16238.t1 0.8572256859718588 97 Cpa|evm.model.tig00000498.41 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase tig00000498_g1616.t1 0.8546221844549646 100