Sequence Description Alias PCC hrr Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana tig00000681_g3064.t1 0.9469629960459505 10 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.9409643355194112 27 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9348763189498549 21 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9328220750240596 30 Cpa|evm.model.tig00001128.6 tig00001128_g7172.t1 0.9325710730360176 5 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000093_g3534.t1 0.9321193185084474 36 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.9303982345712676 29 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.9237977337912153 37 Cpa|evm.model.tig00000480.41 tig00000480_g1309.t1 0.921596692304928 21 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.9203102401764134 43 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.9196775943684955 22 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.9194326110420861 28 Cpa|evm.model.tig00001155.24 Protein NCA1 OS=Arabidopsis thaliana tig00001155_g7330.t1 0.919361741809957 32 Cpa|evm.model.tig00020553.66 tig00020553_g10555.t1 0.9177385170822513 19 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9165863003748831 56 Cpa|evm.model.tig00000093.172 tig00000093_g3599.t1 0.9165158065095524 22 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana tig00021579_g22443.t1 0.9161237877951274 41 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.9151110082282963 50 Cpa|evm.model.tig00000248.71 tig00000248_g21830.t1 0.9109910647608249 39 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.9087618762944422 45 Cpa|evm.model.tig00001310.4 tig00001310_g8153.t1 0.9080619510322231 48 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.9074743495474848 49 Cpa|evm.model.tig00000241.135 tig00000241_g21000.t1 0.9055878597270753 23 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9047288019664144 51 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9043066017024652 70 Cpa|evm.model.tig00020902.80 tig00020902_g15035.t1 0.9029555012113247 26 Cpa|evm.model.tig00021339.48 tig00021339_g20435.t1 0.9025358449139649 35 Cpa|evm.model.tig00020560.15 tig00020560_g11080.t1 0.901643057152605 28 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.901017078927604 67 Cpa|evm.model.tig00000042.172 tig00000042_g15577.t1 0.899438464515923 30 Cpa|evm.model.tig00000073.49 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter tig00000073_g1729.t1 0.8990424069001786 31 Cpa|evm.model.tig00000383.32 Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa subsp. japonica tig00000383_g24642.t1 0.8982102073408762 32 Cpa|evm.model.tig00000254.128 tig00000254_g22588.t1 0.8981886007269392 33 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.8971977019218624 50 Cpa|evm.model.tig00021108.20 tig00021108_g18310.t1 0.8966753358048651 45 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.8965988368023239 69 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana tig00000823_g4555.t1 0.8957876372350143 37 Cpa|evm.model.tig00000402.46 tig00000402_g223.t1 0.8956770612049857 42 Cpa|evm.model.tig00020688.3 tig00020688_g12986.t1 0.8953876141736384 39 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.8917990228816659 77 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.8913076171257421 67 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.8904917785194466 90 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.8902815846620881 84 Cpa|evm.model.tig00000551.3 tig00000551_g2024.t1 0.88983959334683 47 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.8895008496563929 53 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.8894311927690983 53 Cpa|evm.model.tig00000455.54 tig00000455_g1052.t1 0.8871646077217565 70 Cpa|evm.model.tig00021796.8 tig00021796_g23559.t1 0.8864158635716884 48 Cpa|evm.model.tig00000391.27 tig00000391_g24860.t1 0.8858890020324333 59 Cpa|evm.model.tig00021435.52 tig00021435_g21433.t1 0.8849617726235325 50 Cpa|evm.model.tig00021494.27 tig00021494_g21938.t1 0.8835399291282653 52 Cpa|evm.model.tig00000215.107 tig00000215_g18646.t1 0.882436643246971 54 Cpa|evm.model.tig00000882.15 tig00000882_g5260.t1 0.8805180765693471 54 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.8790922965410254 90 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.8790148498691378 80 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.878862246921699 57 Cpa|evm.model.tig00020537.49 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type) tig00020537_g10271.t1 0.8782421929813296 58 Cpa|evm.model.tig00021036.35 Lipid metabolism.lipid degradation.glycerol degradation.FAD-dependent glycerol-3-phosphate dehydrogenase tig00021036_g17307.t1 0.8773026893871854 59 Cpa|evm.model.tig00000391.34 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase acting on acid anhydride(50.3.6 : 126.6) & Nudix hydrolase 19, chloroplastic OS=Arabidopsis thaliana tig00000391_g24864.t1 0.8765011485479746 60 Cpa|evm.model.tig00001024.27 tig00001024_g6335.t1 0.8759655934549837 61 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8756462936719313 63 Cpa|evm.model.tig00000955.10 DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) tig00000955_g5782.t1 0.8755140048698334 63 Cpa|evm.model.tig00020941.39 tig00020941_g16231.t1 0.8750706818893299 78 Cpa|evm.model.tig00000367.31 tig00000367_g24467.t1 0.8749979815758547 74 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.874808470985603 88 Cpa|evm.model.tig00021036.46 tig00021036_g17319.t1 0.8746539551886581 67 Cpa|evm.model.tig00000691.29 tig00000691_g3181.t1 0.8740251032654465 68 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000586_g2256.t1 0.8729528371084669 69 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.8713915032207501 70 Cpa|evm.model.tig00000310.32 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000310_g23954.t1 0.870340395165505 72 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.87010717212904 99 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.8701020921952402 91 Cpa|evm.model.tig00000478.28 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00000478_g1276.t1 0.869463030818228 75 Cpa|evm.model.tig00000553.12 tig00000553_g2082.t1 0.8672488440417124 79 Cpa|evm.model.tig00000670.28 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000670_g3045.t1 0.8665190717394596 81 Cpa|evm.model.tig00000361.3 tig00000361_g24357.t1 0.8659008723196621 82 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.865213638194962 83 Cpa|evm.model.tig00020904.47 tig00020904_g15179.t1 0.864341294463065 86 Cpa|evm.model.tig00020930.19 tig00020930_g16029.t1 0.8633847687513085 87 Cpa|evm.model.tig00021133.3 tig00021133_g18903.t1 0.862939510359561 88 Cpa|evm.model.tig00021332.16 tig00021332_g20335.t1 0.862550956025806 89 Cpa|evm.model.tig00000144.84 tig00000144_g9076.t1 0.8614114014360249 90 Cpa|evm.model.tig00000605.21 0.8604661189762736 91 Cpa|evm.model.tig00021435.53 tig00021435_g21434.t1 0.8603431780596842 92 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.8597031619576616 93 Cpa|evm.model.tig00020553.74 tig00020553_g10564.t1 0.8570132396572042 95 Cpa|evm.model.tig00000344.14 0.8560613566114963 98 Cpa|evm.model.tig00001269.8 tig00001269_g7979.t1 0.8551999415509502 99 Cpa|evm.model.tig00000630.45 tig00000630_g2730.t1 0.8550398029658745 100