Sequence Description Alias PCC hrr Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component tig00000545_g1991.t1 0.95651362155207 2 Cpa|evm.model.tig00001098.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component tig00001098_g7056.t1 0.9397472454719001 2 Cpa|evm.model.tig00020614.5 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component tig00020614_g12118.t1 0.9339892732695912 3 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.9319218339499782 8 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component tig00001542_g9329.t1 0.9289214421158877 10 Cpa|evm.model.tig00020554.80 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component tig00020554_g10859.t1 0.9148275313303508 8 Cpa|evm.model.tig00021037.27 tig00021037_g17432.t1 0.9075507562513196 7 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana tig00000802_g4296.t1 0.9039113549075497 11 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.9028491433250984 11 Cpa|evm.model.tig00021680.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN4 component tig00021680_g23038.t1 0.9020561870094659 10 Cpa|evm.model.tig00021348.57 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component tig00021348_g20560.t1 0.9006016120061762 11 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana tig00021357_g20766.t1 0.8983256949054925 26 Cpa|evm.model.tig00000842.19 Cell cycle.cytokinesis.phragmoplast microtubule organization.TIO Kinesin-12-regulating kinase tig00000842_g4839.t1 0.8948455481120409 13 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.8934069824348682 42 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component tig00000808_g4429.t1 0.8924126072139452 22 Cpa|evm.model.tig00000842.8 tig00000842_g4828.t1 0.8908733061478308 16 Cpa|evm.model.tig00020830.84 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-4 component tig00020830_g14467.t1 0.8894321686413406 17 Cpa|evm.model.tig00000802.46 tig00000802_g4296.t1 0.8890458302973143 18 Cpa|evm.model.tig00020614.111 Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana tig00020614_g12228.t1 0.8875592745498481 19 Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component tig00020965_g16836.t1 0.8867248819119553 34 Cpa|evm.model.tig00001160.15 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component tig00001160_g7349.t1 0.8860595613695155 21 Cpa|evm.model.tig00001374.12 tig00001374_g8504.t1 0.883815486859907 22 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component tig00021435_g21395.t1 0.8827943718783661 23 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor tig00000383_g24650.t1 0.8826297583349326 24 Cpa|evm.model.tig00000829.5 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase tig00000829_g4647.t1 0.8822267849286467 25 Cpa|evm.model.tig00020554.143 0.8820661523602329 26 Cpa|evm.model.tig00021434.64 tig00021434_g21368.t1 0.8819832926931662 27 Cpa|evm.model.tig00021319.69 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00021319_g20261.t1 0.8802973887219551 28 Cpa|evm.model.tig00021348.85 tig00021348_g20594.t1 0.8746216872389206 29 Cpa|evm.model.tig00000144.149 Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana tig00000144_g9144.t1 0.8742581574180847 30 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.8742312048386152 68 Cpa|evm.model.tig00020930.28 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica tig00020930_g16037.t1 0.8717233096812332 32 Cpa|evm.model.tig00001600.10 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 314.8) & Triosephosphate isomerase, chloroplastic OS=Secale cereale tig00001600_g9395.t1 0.8714524758973512 33 Cpa|evm.model.tig00021464.32 tig00021464_g21737.t1 0.8711374527322674 34 Cpa|evm.model.tig00000342.12 tig00000342_g24200.t1 0.8690160894188503 35 Cpa|evm.model.tig00001003.26 tig00001003_g6283.t1 0.868361771808063 36 Cpa|evm.model.tig00021217.9 tig00021217_g19336.t1 0.8677555633234881 37 Cpa|evm.model.tig00021352.44 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana tig00021352_g20712.t1 0.8663989034687962 43 Cpa|evm.model.tig00020554.107 tig00020554_g10884.t1 0.8657491214691254 42 Cpa|evm.model.tig00020629.95 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana tig00020629_g12416.t1 0.8656215846797115 56 Cpa|evm.model.tig00000383.54 Uncharacterized protein At2g34160 OS=Arabidopsis thaliana tig00000383_g24668.t1 0.8642290131650178 42 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8641159832860621 65 Cpa|evm.model.tig00020610.73 tig00020610_g12017.t1 0.8630487821133618 44 Cpa|evm.model.tig00021608.5 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN1 component tig00021608_g22838.t1 0.8623007211816088 45 Cpa|evm.model.tig00020710.120 Oxysterol-binding protein-related protein 1B OS=Arabidopsis thaliana tig00020710_g13384.t1 0.8622839046217563 46 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.8617035344139589 72 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.8614848856240717 80 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component tig00001339_g8261.t1 0.8596518976695 78 Cpa|evm.model.tig00020675.2 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein tig00020675_g12580.t1 0.8548240563364695 50 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component tig00020903_g15104.t1 0.854792492770439 82 Cpa|evm.model.tig00001371.17 tig00001371_g8434.t1 0.8546827743390742 52 Cpa|evm.model.tig00020589.5 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26 component tig00020589_g11619.t1 0.8539672167539355 64 Cpa|evm.model.tig00000237.44 tig00000237_g20493.t1 0.8525199100106672 54 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component tig00000944_g5943.t1 0.8518483038096253 96 Cpa|evm.model.tig00000217.21 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 175.7) & Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana tig00000217_g19154.t1 0.8518430398558768 56 Cpa|evm.model.tig00000944.23 Protein degradation.peptide tagging.Homologous-to-Ubiquitin (HUB)-anchor addition.HUB ubiquitin-fold protein tig00000944_g5946.t1 0.8517668886700265 78 Cpa|evm.model.tig00000042.55 tig00000042_g15445.t1 0.8517416077016289 58 Cpa|evm.model.tig00020710.117 tig00020710_g13381.t1 0.8513328301792694 59 Cpa|evm.model.tig00020912.18 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.TFB2-type subunit tig00020912_g15788.t1 0.8509316424558686 61 Cpa|evm.model.tig00020903.33 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit tig00020903_g15100.t1 0.8507618405605953 62 Cpa|evm.model.tig00001302.4 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.pachytene checkpoint protein (PCH2/CRC1) tig00001302_g8088.t1 0.8500356256991438 63 Cpa|evm.model.tig00020909.31 Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana tig00020909_g15353.t1 0.8476807754320653 64 Cpa|evm.model.tig00000842.55 RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP25/POP6 | RPP20/POP7 component tig00000842_g4876.t1 0.846379416207261 66 Cpa|evm.model.tig00001086.22 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component tig00001086_g6856.t1 0.8457586395212096 67 Cpa|evm.model.tig00020703.9 26S proteasome non-ATPase regulatory subunit 2 homolog A OS=Arabidopsis thaliana tig00020703_g13111.t1 0.8455541478724133 84 Cpa|evm.model.tig00000388.41 tig00000388_g24801.t1 0.8453496977332507 69 Cpa|evm.model.tig00001428.1 tig00001428_g8718.t1 0.8453386987165763 70 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein tig00000144_g9007.t1 0.8452302920342647 75 Cpa|evm.model.tig00000808.7 Solute transport.carrier-mediated transport.DMT superfamily.CLT glutathione transporter tig00000808_g4391.t1 0.8441873132180997 72 Cpa|evm.model.tig00020902.32 Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana tig00020902_g14983.t1 0.8435171851667976 73 Cpa|evm.model.tig00020911.28 Protein BONZAI 3 OS=Arabidopsis thaliana tig00020911_g15730.t1 0.8431381017928994 76 Cpa|evm.model.tig00001376.20 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component tig00001376_g8541.t1 0.8429254686951309 77 Cpa|evm.model.tig00000241.145 tig00000241_g21010.t1 0.8426476689334975 78 Cpa|evm.model.tig00021612.47 tig00021612_g22888.t1 0.8410143438396543 79 Cpa|evm.model.tig00020563.151 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-E component tig00020563_g11353.t1 0.8392618032712758 81 Cpa|evm.model.tig00000248.9 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.p24-beta regulator protein tig00000248_g21777.t1 0.8383495289713767 83 Cpa|evm.model.tig00020710.65 Protein RER1C OS=Arabidopsis thaliana tig00020710_g13316.t1 0.838093393776538 85 Cpa|evm.model.tig00000851.24 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component tig00000851_g4909.t1 0.8363868442762479 88 Cpa|evm.model.tig00000903.41 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component tig00000903_g5533.t1 0.8329781011346477 91 Cpa|evm.model.tig00001206.4 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 333.7) & Phosphoglycerate kinase 3, cytosolic OS=Arabidopsis thaliana tig00001206_g7487.t1 0.8322297215935114 92 Cpa|evm.model.tig00022075.52 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana tig00022075_g23613.t1 0.8313250185123132 95 Cpa|evm.model.tig00000241.58 tig00000241_g20916.t1 0.8310684406122452 96 Cpa|evm.model.tig00000944.2 tig00000944_g5924.t1 0.8300660497395806 100