Sequence Description Alias PCC hrr Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.9486041481881095 3 Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component tig00000545_g1991.t1 0.9415931946946126 4 Cpa|evm.model.tig00020554.44 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component tig00020554_g10827.t1 0.9339892732695912 3 Cpa|evm.model.tig00021037.27 tig00021037_g17432.t1 0.9258848909485073 4 Cpa|evm.model.tig00021348.57 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component tig00021348_g20560.t1 0.9246804607384782 5 Cpa|evm.model.tig00021319.69 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00021319_g20261.t1 0.9211116875154353 6 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit tig00020903_g15096.t1 0.9190442470307503 7 Cpa|evm.model.tig00020554.80 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component tig00020554_g10859.t1 0.9159712005671288 8 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component tig00001542_g9329.t1 0.9154974043509896 14 Cpa|evm.model.tig00001098.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component tig00001098_g7056.t1 0.9147403759709288 12 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.9134749940354309 13 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana tig00000802_g4296.t1 0.9121504499175492 12 Cpa|evm.model.tig00020903.33 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit tig00020903_g15100.t1 0.9052409635879919 13 Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component tig00020965_g16836.t1 0.903649480934429 23 Cpa|evm.model.tig00020902.32 Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana tig00020902_g14983.t1 0.9010159294098732 15 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.8999010676478345 27 Cpa|evm.model.tig00021464.32 tig00021464_g21737.t1 0.8983540416904041 17 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component tig00000829_g4645.t1 0.8962366898341325 18 Cpa|evm.model.tig00001003.26 tig00001003_g6283.t1 0.8931524073717767 19 Cpa|evm.model.tig00000241.38 Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM7 component tig00000241_g20896.t1 0.8926812848340256 20 Cpa|evm.model.tig00001600.10 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 314.8) & Triosephosphate isomerase, chloroplastic OS=Secale cereale tig00001600_g9395.t1 0.8914385124031455 21 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana tig00021357_g20766.t1 0.8872214217284703 39 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component tig00021435_g21395.t1 0.8851661025952801 23 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.8848425450227899 31 Cpa|evm.model.tig00021608.5 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN1 component tig00021608_g22838.t1 0.88244190392217 25 Cpa|evm.model.tig00020610.73 tig00020610_g12017.t1 0.8820653933887953 26 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component tig00000792_g4177.t1 0.8820634189838765 60 Cpa|evm.model.tig00020848.37 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase tig00020848_g14564.t1 0.8820066075232753 44 Cpa|evm.model.tig00020629.95 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana tig00020629_g12416.t1 0.8803739700215809 32 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.8803403931144261 98 Cpa|evm.model.tig00020675.2 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein tig00020675_g12580.t1 0.8786741002504409 31 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.878110148022563 54 Cpa|evm.model.tig00020930.28 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica tig00020930_g16037.t1 0.8771414942267677 33 Cpa|evm.model.tig00020589.5 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26 component tig00020589_g11619.t1 0.8762029235996426 37 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.8750373931589152 72 Cpa|evm.model.tig00000829.14 tig00000829_g4656.t1 0.8747253632622625 36 Cpa|evm.model.tig00001206.4 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 333.7) & Phosphoglycerate kinase 3, cytosolic OS=Arabidopsis thaliana tig00001206_g7487.t1 0.8703684078984468 37 Cpa|evm.model.tig00021435.23 tig00021435_g21400.t1 0.8702718497365748 38 Cpa|evm.model.tig00022075.52 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana tig00022075_g23613.t1 0.8700980616093066 39 Cpa|evm.model.tig00000455.18 Ras-related protein RABD2c OS=Arabidopsis thaliana tig00000455_g1006.t1 0.8681987813499843 40 Cpa|evm.model.tig00001302.4 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.pachytene checkpoint protein (PCH2/CRC1) tig00001302_g8088.t1 0.8675429780848187 41 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component tig00022075_g23612.t1 0.8663273838359713 59 Cpa|evm.model.tig00001003.6 Vacuolar protein sorting-associated protein 52 A OS=Arabidopsis thaliana tig00001003_g6264.t1 0.8644051545235898 43 Cpa|evm.model.tig00000076.87 U2 small nuclear ribonucleoprotein B OS=Oryza sativa subsp. indica tig00000076_g2385.t1 0.8638398259104993 52 Cpa|evm.model.tig00020875.12 Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii tig00020875_g14889.t1 0.8629517047948669 46 Cpa|evm.model.tig00020554.143 0.862156561007323 47 Cpa|evm.model.tig00001030.11 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 263.1) & Calcium-dependent protein kinase 10 OS=Oryza sativa subsp. japonica tig00001030_g6452.t1 0.8607587200688501 49 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.8604345402445495 74 Cpa|evm.model.tig00001590.11 tig00001590_g9383.t1 0.8597713640853419 50 Cpa|evm.model.tig00000042.11 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain tig00000042_g15397.t1 0.8592638281600637 52 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component tig00000808_g4429.t1 0.8590061969142543 71 Cpa|evm.model.tig00000842.8 tig00000842_g4828.t1 0.8583811310627499 58 Cpa|evm.model.tig00020554.46 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component tig00020554_g10829.t1 0.8583262609816772 56 Cpa|evm.model.tig00020614.111 Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana tig00020614_g12228.t1 0.8577488687346159 57 Cpa|evm.model.tig00001374.12 tig00001374_g8504.t1 0.8564116632261274 58 Cpa|evm.model.tig00020572.40 tig00020572_g11560.t1 0.8552121256627242 60 Cpa|evm.model.tig00000802.46 tig00000802_g4296.t1 0.8546876341172968 61 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component tig00021435_g21391.t1 0.8541678862168978 62 Cpa|evm.model.tig00001160.15 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component tig00001160_g7349.t1 0.8541655441188356 63 Cpa|evm.model.tig00021433.16 tig00021433_g21270.t1 0.8539493859075078 64 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana tig00000076_g2403.t1 0.8539449874616315 65 Cpa|evm.model.tig00021352.44 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana tig00021352_g20712.t1 0.8538296234309711 73 Cpa|evm.model.tig00000113.32 tig00000113_g5602.t1 0.8531733141469416 68 Cpa|evm.model.tig00020710.65 Protein RER1C OS=Arabidopsis thaliana tig00020710_g13316.t1 0.8525017920551108 69 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor tig00000383_g24650.t1 0.8523798100694099 70 Cpa|evm.model.tig00021017.29 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC1 component tig00021017_g17203.t1 0.8522935117847967 71 Cpa|evm.model.tig00000144.164 Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM4 component tig00000144_g9157.t1 0.8521228718593248 72 Cpa|evm.model.tig00000944.23 Protein degradation.peptide tagging.Homologous-to-Ubiquitin (HUB)-anchor addition.HUB ubiquitin-fold protein tig00000944_g5946.t1 0.8501518051093524 80 Cpa|evm.model.tig00000900.23 tig00000900_g5378.t1 0.8494793083512159 74 Cpa|evm.model.tig00001376.20 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component tig00001376_g8541.t1 0.849286677008142 75 Cpa|evm.model.tig00000851.24 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component tig00000851_g4909.t1 0.8481127860497316 76 Cpa|evm.model.tig00000692.65 Calmodulin-2 OS=Oryza sativa subsp. japonica tig00000692_g3264.t1 0.8478552184097965 77 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8478218776807365 100 Cpa|evm.model.tig00000037.19 tig00000037_g10087.t1 0.8455887422755539 79 Cpa|evm.model.tig00020918.5 Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM6 component tig00020918_g15883.t1 0.8446499136820511 81 Cpa|evm.model.tig00001371.8 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT7 eta subunit tig00001371_g8424.t1 0.8446072289649094 82 Cpa|evm.model.tig00000241.145 tig00000241_g21010.t1 0.8438176786328178 83 Cpa|evm.model.tig00000198.5 tig00000198_g16069.t1 0.8431544903184683 85 Cpa|evm.model.tig00000455.23 tig00000455_g1012.t1 0.842072936942086 86 Cpa|evm.model.tig00000361.60 tig00000361_g24408.t1 0.8399444266535495 88 Cpa|evm.model.tig00000042.17 Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana tig00000042_g15403.t1 0.8385661367979185 91 Cpa|evm.model.tig00000718.71 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).snRNP40/U5-40kDa snRNP component tig00000718_g3743.t1 0.8378058273720943 93 Cpa|evm.model.tig00021168.12 COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana tig00021168_g19078.t1 0.8374606183090235 94 Cpa|evm.model.tig00000889.15 tig00000889_g5302.t1 0.8366778720391037 95 Cpa|evm.model.tig00021464.58 tig00021464_g21761.t1 0.8365862637463086 96 Cpa|evm.model.tig00000851.23 DNA damage-binding protein 1 OS=Solanum lycopersicum tig00000851_g4909.t1 0.8348988521259728 100