Sequence Description Alias PCC hrr Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9715884509462928 2 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.963676862399249 7 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.9628285024599645 3 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.9566922364677695 10 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.9557312891697058 10 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.954082835866885 10 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.9527495097143366 7 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.9510365540225055 15 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.9482185276050626 9 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9475835159589845 14 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.9428345457760398 11 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9419953049565983 16 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.9411828895098142 13 Cpa|evm.model.tig00000455.54 tig00000455_g1052.t1 0.9402214754900767 14 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000093_g3534.t1 0.9378882215323264 26 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.9377474462017009 18 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.9372775798681072 17 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.9349616522491977 18 Cpa|evm.model.tig00000551.6 tig00000551_g2028.t1 0.9343217376006379 19 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.926465145972948 32 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9263186869525815 33 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.9259678269780699 36 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.9255702655041292 23 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.9248479769712151 38 Cpa|evm.model.tig00020951.45 tig00020951_g16446.t1 0.9238211558085442 25 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.9236075954805177 40 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.9235457816272133 27 Cpa|evm.model.tig00021441.9 tig00021441_g21550.t1 0.9232587621642808 28 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.9227097776013514 44 Cpa|evm.model.tig00001155.24 Protein NCA1 OS=Arabidopsis thaliana tig00001155_g7330.t1 0.922310136117136 30 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9217477995682216 46 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.9205025633868819 32 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.9194589553699078 33 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.9187547031581283 34 Cpa|evm.model.tig00000796.24 tig00000796_g4247.t1 0.9174087905160062 35 Cpa|evm.model.tig00020960.66 tig00020960_g16592.t1 0.9167951960058462 36 Cpa|evm.model.tig00020961.58 Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica tig00020961_g16680.t1 0.9151130971287125 37 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.9149583649373417 38 Cpa|evm.model.tig00021135.31 tig00021135_g18951.t1 0.9147780537695887 39 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.9146253729331981 40 Cpa|evm.model.tig00001086.15 tig00001086_g6850.t1 0.9142760092900512 41 Cpa|evm.model.tig00021135.25 tig00021135_g18947.t1 0.914261275375136 42 Cpa|evm.model.tig00000411.40 Solute transport.carrier-mediated transport.MC-type solute transporter tig00000411_g543.t1 0.913322043402955 43 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9129569170525633 44 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9126249208153927 50 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.9114831146712179 46 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.9111061373532401 47 Cpa|evm.model.tig00021517.29 tig00021517_g22017.t1 0.9109133790291509 48 Cpa|evm.model.tig00001527.9 tig00001527_g9259.t1 0.908985536927163 49 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.9081784963640734 50 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.9080635435493418 51 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.907627698704694 63 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.9065584726150928 54 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.9061654489552633 54 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9042963632784426 55 Cpa|evm.model.tig00020553.283 Solute transport.carrier-mediated transport.MC-type solute transporter tig00020553_g10768.t1 0.9040720532114893 56 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.9035431985632909 57 Cpa|evm.model.tig00020934.55 tig00020934_g16123.t1 0.9029177412369235 58 Cpa|evm.model.tig00021108.20 tig00021108_g18310.t1 0.9013109479506772 59 Cpa|evm.model.tig00000344.14 0.9010697199465318 60 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.9006943450188221 61 Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.9005612766378236 62 Cpa|evm.model.tig00020943.7 0.9002737280912237 63 Cpa|evm.model.tig00021094.10 Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter tig00021094_g18099.t1 0.899313758744234 64 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.8991078706803634 65 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.8989914035410301 66 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.8988001818601675 67 Cpa|evm.model.tig00000215.61 tig00000215_g18599.t1 0.8984732488537606 68 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.8975129603010679 69 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8969854346961997 70 Cpa|evm.model.tig00021108.21 tig00021108_g18310.t1 0.8954386670738241 71 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.8949033454746316 72 Cpa|evm.model.tig00000949.8 tig00000949_g5719.t1 0.894404501798016 73 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana tig00021579_g22443.t1 0.892936152389861 74 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.8920517263179587 75 Cpa|evm.model.tig00000093.172 tig00000093_g3599.t1 0.891939119029148 76 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.8917990228816659 77 Cpa|evm.model.tig00000367.31 tig00000367_g24467.t1 0.891399783782107 78 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.8910811221401213 79 Cpa|evm.model.tig00000863.53 tig00000863_g5008.t1 0.8888077569699055 80 Cpa|evm.model.tig00000194.65 tig00000194_g14792.t2 0.8874605162114965 81 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana tig00000681_g3064.t1 0.8858755001906079 82 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.8852988979897025 83 Cpa|evm.model.tig00000169.34 Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana tig00000169_g11906.t1 0.8852082883108535 84 Cpa|evm.model.tig00020557.6 tig00020557_g11109.t1 0.8849682063472741 85 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana tig00020961_g16679.t1 0.8841800098271692 86 Cpa|evm.model.tig00021012.31 tig00021012_g17011.t1 0.8839222755133497 87 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.8835289699347538 88 Cpa|evm.model.tig00020553.74 tig00020553_g10564.t1 0.8834495576459143 89 Cpa|evm.model.tig00020961.55 tig00020961_g16677.t1 0.883088637795991 90 Cpa|evm.model.tig00020800.23 tig00020800_g13741.t1 0.883074522617863 91 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.8798371707650758 92 Cpa|evm.model.tig00021017.25 tig00021017_g17199.t1 0.8790004086323797 93 Cpa|evm.model.tig00000157.5 Solute transport.carrier-mediated transport.MC-type solute transporter tig00000157_g9593.t1 0.8781996435216171 94 Cpa|evm.model.tig00020563.171 Protein degradation.peptidase families.metallopeptidase activities.M48 families.PGM48 zinc metalloprotease tig00020563_g11372.t1 0.8781260295383877 95 Cpa|evm.model.tig00020952.27 Deoxyribodipyrimidine photo-lyase OS=Oryza sativa subsp. japonica tig00020952_g16501.t1 0.876022253831765 96 Cpa|evm.model.tig00000254.122 tig00000254_g22582.t1 0.8757190712876184 97 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.8753919235607083 98 Cpa|evm.model.tig00020554.98 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) tig00020554_g10876.t1 0.8753406935401673 99 Cpa|evm.model.tig00000367.32 tig00000367_g24467.t1 0.8746440098230679 100