Sequence Description Alias PCC hrr Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9660249314750364 1 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.945658568879873 3 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9307100966004443 16 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9304898575217299 30 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.9267281316656989 25 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9265434105178508 31 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.9260931934958233 37 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9256580422386156 35 Cpa|evm.model.tig00001376.11 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcdA component tig00001376_g8532.t1 0.9228031215180675 9 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.922290006977317 38 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana tig00020592_g11633.t1 0.9198412325446148 17 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9195514227668731 50 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.9192677541993051 22 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.9184914192825676 28 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.9163595063115105 37 Cpa|evm.model.tig00021017.25 tig00021017_g17199.t1 0.9154381849907749 17 Cpa|evm.model.tig00021796.8 tig00021796_g23559.t1 0.9130850145643837 17 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.912789482420904 30 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.9122419719909443 45 Cpa|evm.model.tig00000551.6 tig00000551_g2028.t1 0.9121000046388901 37 Cpa|evm.model.tig00000760.8 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000760_g3929.t1 0.9119664833624669 21 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.9115231498011989 45 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.9114835635490303 31 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.9114056880809561 64 Cpa|evm.model.tig00021441.9 tig00021441_g21550.t1 0.910291356248462 28 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.9080500053827084 26 Cpa|evm.model.tig00021464.19 tig00021464_g21725.t1 0.907443297318536 27 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.9062162347457062 48 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.9041845212040385 66 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.9039482467306365 31 Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.9028662563229095 35 Cpa|evm.model.tig00020951.45 tig00020951_g16446.t1 0.8999302884517842 45 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.8999008155507037 58 Cpa|evm.model.tig00001629.4 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.Z-ISO zeta-carotene isomerase tig00001629_g9520.t1 0.8988116005797009 34 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.8981476738596967 80 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.896497467756827 46 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.8963991232114572 69 Cpa|evm.model.tig00000430.44 tig00000430_g633.t1 0.8955381853644998 38 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.8954982885032687 39 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.8949033454746316 72 Cpa|evm.model.tig00021126.3 ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana tig00021126_g18456.t1 0.8947004941447724 41 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.8942341495864919 75 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.8940823362450787 54 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.8927581393113501 44 Cpa|evm.model.tig00000836.10 tig00000836_g4694.t1 0.8911062301064793 45 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.8900689813197018 46 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.8892099386962617 74 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.8889634279680334 54 Cpa|evm.model.tig00001024.27 tig00001024_g6335.t1 0.887307982379517 49 Cpa|evm.model.tig00000361.1 tig00000361_g24355.t1 0.8861886973081775 50 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.8859939279542177 94 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.884845752775754 75 Cpa|evm.model.tig00001094.25 tig00001094_g6998.t1 0.8841609843097162 53 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8825657208272691 57 Cpa|evm.model.tig00020961.58 Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica tig00020961_g16680.t1 0.8818159493343509 83 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.8816954977951225 97 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.8810308022883377 61 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.8809366819817207 84 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.8803213640016382 95 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.8797177848906081 61 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.8795360911411514 62 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.8793698615745155 63 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.8773616485738938 64 Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.8762149311351491 66 Cpa|evm.model.tig00000391.27 tig00000391_g24860.t1 0.8745246583723032 80 Cpa|evm.model.tig00000551.3 tig00000551_g2024.t1 0.8742963481540292 74 Cpa|evm.model.tig00001086.15 tig00001086_g6850.t1 0.8736909364896113 83 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.8736449452582206 71 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.8732187278938958 74 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.8728154095385442 86 Cpa|evm.model.tig00021357.42 tig00021357_g20768.t1 0.872402778200371 74 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.8713887723525913 94 Cpa|evm.model.tig00020911.11 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana tig00020911_g15711.t1 0.8705440329439089 76 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8704632028897653 77 Cpa|evm.model.tig00000344.14 0.8694336524162768 78 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.8686626935379672 96 Cpa|evm.model.tig00020684.6 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase tig00020684_g12854.t1 0.8674119101727044 80 Cpa|evm.model.tig00000893.6 tig00000893_g5349.t1 0.8670146283219701 81 Cpa|evm.model.tig00021582.39 ABC transporter G family member 22 OS=Arabidopsis thaliana tig00021582_g22636.t1 0.8657840981736643 82 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.865213638194962 83 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor tig00020943_g16313.t1 0.864612827046126 84 Cpa|evm.model.tig00020554.48 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC10 component tig00020554_g10831.t1 0.8642497425499874 85 Cpa|evm.model.tig00001033.3 tig00001033_g6484.t1 0.8638248992007832 86 Cpa|evm.model.tig00000459.97 tig00000459_g1161.t1 0.8635801731121082 87 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.8634758151777113 93 Cpa|evm.model.tig00000042.43 Histidine kinase 3 OS=Arabidopsis thaliana tig00000042_g15436.t1 0.8634688932874712 89 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020660_g12512.t1 0.8623134004931395 90 Cpa|evm.model.tig00020660.34 tig00020660_g12531.t1 0.862190825149855 91 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.8621786067547484 92 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8613823524596781 93 Cpa|evm.model.tig00001532.3 tig00001532_g9269.t1 0.861342391216539 94 Cpa|evm.model.tig00020934.55 tig00020934_g16123.t1 0.861032345567567 95 Cpa|evm.model.tig00000718.1 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8607875531310216 97 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca tig00000863_g5002.t1 0.8602423761832253 99 Cpa|evm.model.tig00000142.17 tig00000142_g8652.t1 0.8592058450601598 100