Sequence Description Alias PCC hrr Cre12.g493550 30792292 0.950963488536 2 Cre12.g492200 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor 30793478 0.942125234625 2 Cre11.g467751 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase 30775961 0.93406253425 3 Cre17.g711457 30782056 0.926377719292 7 Cre02.g143587 30785941 0.923859718624 7 Cre10.g425501 Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica 30790106 0.91881131132 19 Cre06.g290250 30779238 0.917494672165 22 Cre13.g568700 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component 30784134 0.91387527967 28 Cre02.g120350 30785164 0.913326173663 21 Cre01.g003450 30789254 0.911694739911 10 Cre08.g382900 30773904 0.910492317947 11 Cre11.g468356 30775570 0.908959879341 30 Cre03.g190550 30787319 0.908581345616 26 Cre10.g465850 30789795 0.90789329506 14 Cre01.g010650 30789303 0.907437932517 15 Cre08.g364050 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component 30774000 0.906596733189 16 Cre17.g734050 30781646 0.906547692503 32 Cre12.g506650 30792505 0.905975265247 37 Cre07.g319000 30774349 0.905626414697 59 Cre02.g083300 30785121 0.904723992995 20 Cre16.g695300 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component 30777381 0.903580254662 21 Cre17.g745547 30782778 0.903306949843 34 Cre12.g488100 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component 30793266, UPF3 0.902092494982 23 Cre09.g410300 30780658 0.900653232049 24 Cre03.g174500 Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 30788186 0.899642433038 44 Cre12.g526950 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF5 component 30792530 0.899521764918 60 Cre13.g587800 30784533 0.898944007751 27 Cre03.g176651 30788101 0.897694227624 28 Cre03.g171250 30786549 0.894220333186 41 Cre14.g633100 30776136 0.893531406559 30 Cre14.g618860 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component 30776654 0.893274044532 98 Cre08.g380151 30774050 0.892475503471 32 Cre15.g636650 30783661 0.892264583211 33 Cre03.g152450 30788300 0.891929098371 34 Cre02.g078150 30785763 0.891567548656 35 Cre03.g204950 30787324 0.891021779933 36 Cre09.g386800 30780227 0.890085837628 37 Cre09.g400000 30780956 0.884928434277 38 Cre17.g712200 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 30782668 0.884416396462 86 Cre07.g313500 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin 30774828 0.883307167155 59 Cre12.g487600 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component 30793142, CPS2 0.881718240547 89 Cre02.g083050 30785434 0.881572219394 43 Cre07.g326010 30774564 0.880011766056 92 Cre02.g084900 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RPAP3 polymerase- II regulator protein 30786010 0.87996552546 45 Cre16.g679400 30777352 0.879349057745 51 Cre02.g142900 30785443 0.878521089017 48 Cre02.g143600 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 30785531 0.878220099687 49 Cre10.g459700 30790191 0.876721780312 55 Cre12.g537671 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana 30792915 0.876504027965 52 Cre16.g687301 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) 30777125 0.876447430244 53 Cre10.g452200 30790159 0.875446496971 54 Cre01.g012450 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 30788678 0.875200271358 87 Cre12.g490250 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor 30792821 0.874316222534 56 Cre12.g552650 30793525, PAP8 0.87406742158 57 Cre13.g567250 30784446 0.873977849013 58 Cre17.g745147 30782042 0.873680824414 59 Cre10.g464950 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component 30790172 0.873350216771 80 Cre01.g038151 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 30788529 0.87318291515 61 Cre12.g524100 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 30793624 0.871447894006 63 Cre01.g003500 30789121 0.870835624354 80 Cre01.g021000 Vesicle trafficking.endomembrane trafficking.BLOC-1 endosome-to-vacuole sorting complex.BLOS1 component 30789576 0.869090647816 67 Cre03.g162150 30788222 0.868534557048 68 Cre14.g619800 30776706 0.868396921733 73 Cre07.g341150 30775153 0.868298504316 71 Cre01.g007774 30788308 0.867910312482 72 Cre17.g698750 30782670 0.866355318056 75 Cre11.g467542 30775594 0.866172746398 76 Cre10.g420400 30789848 0.865589160621 77 Cre01.g048900 30788879 0.86480821181 78 Cre06.g304550 30779374 0.864629962852 98 Cre08.g377200 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana 30773522 0.864324589285 82 Cre03.g205000 30787509 0.864184965402 83 Cre09.g400664 30780275 0.863566885116 88 Cre03.g192400 30788256 0.863550156054 85 Cre02.g086887 Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana 30784868 0.863476853476 86 Cre06.g283634 30779606 0.862951787886 88 Cre14.g630150 30776483 0.862590077367 89 Cre07.g347700 30774911 0.862089118942 91 Cre06.g263250 30779447 0.859416272088 92 Cre17.g746047 30782381 0.859271037324 93 Cre11.g467712 30776077 0.858783106613 95 Cre07.g336750 30775286 0.858576912252 96 Cre08.g363950 30773789 0.857268528465 98 Cre11.g477250 30775687 0.857139427837 99 Cre12.g556950 30792103 0.857109743847 100