Sequence Description Alias PCC hrr Cre06.g300700 30779548 0.92049087824 9 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30791685, CHLI2 0.914118961452 17 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 30778727, CHLG 0.911922290864 14 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 30787325 0.904507199376 12 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 30786587, GSA1 0.896797599984 14 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 30791982, PPS2 0.895360590803 11 Cre10.g457650 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component 30790208 0.884419538357 7 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 30792635, CGL71 0.883585533536 23 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 30789075 0.883105688531 20 Cre01.g014000 30788951 0.88298846845 10 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 30792631, CGL38 0.882438371955 11 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785831, UPD3 0.880223408805 27 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785008, UPD2 0.878218950394 39 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 30789622 0.875124878773 20 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30777930, FAP269 0.873468200307 15 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 30787650 0.87196739899 33 Cre03.g145207 30787333, CPLD33 0.869468764955 18 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 30785467 0.867456843784 19 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 30774423, PSBP6 0.863958554277 33 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 30775099, FDX4 0.863267700978 20 Cre06.g303700 30779468 0.86277919001 42 Cre13.g576760 30784132 0.862487732633 22 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 30777054 0.862344916972 31 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 30788900, BCC2 0.861426273529 24 Cre04.g213100 30791212, CGLD7 0.860941764908 25 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 30775504 0.858713644316 26 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 30786314, ALAD1 0.852257012094 27 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 30793256 0.849835794523 34 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30778583, CHLI1 0.844836767367 42 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 30791717 0.844029070475 30 Cre07.g328075 30775217 0.842845084459 31 Cre03.g208050 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD) 30786701 0.835873691375 32 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 30784921, CPX2 0.832764561389 33 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 30773407, PSBP4 0.829320550467 34 Cre13.g602350 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase 30784267 0.828023752668 35 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 30777960, RMT1 0.827422993697 39 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 30783214, GUN4 0.826411767351 37 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 30790814 0.826025345844 38 Cre02.g074100 30785783 0.825803826083 39 Cre17.g715500 30782483 0.825126619612 40 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 30783185, FTSY 0.824355405539 45 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 30777907, CMS1 0.821326921402 63 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase 30790114, ADK2 0.820052531537 43 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 30787386, DLA2 0.817863659055 48 Cre03.g171100 30787901 0.817842974585 45 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 30783498, CHLD 0.813579204641 67 Cre05.g243050 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin 30783290 0.811371908354 47 Cre03.g209841 30787009 0.810632621174 48 Cre17.g732250 30782090 0.810226627212 49 Cre07.g321300 30775021 0.810216271858 50 Cre10.g438550 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Tha4 component 30790296, TAT1 0.804812974891 52 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 30788009 0.803907215466 53 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II 30775292, KAS2 0.80333225027 70 Cre02.g145050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 30785791, CMK1 0.80325698851 55 Cre12.g510050 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component 30792531, CTH1 0.801102125131 56 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 30783049 0.801078660009 78 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 30789577, POR1 0.797573405787 58 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 30790156 0.796427887586 77 Cre03.g182150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb32 protein 30787302, TEF8 0.794654449502 60 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 30775172 0.793117536667 85 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 30778701 0.790702833691 62 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 30783932 0.783343488734 70 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 30776945 0.780825166523 82 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30776050, UPD1 0.7798157768 65 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 30777211 0.778852792476 73 Cre08.g369000 30773590 0.778394208154 68 Cre09.g398289 1-acyl-sn-glycerol-3-phosphate acyltransferase CHLREDRAFT_174358 OS=Chlamydomonas reinhardtii 30781171 0.777887095442 69 Cre13.g602650 Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana 30784675 0.777471291844 70 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) 30790817, PRX6 0.777302046384 71 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 30786848, TEF10a 0.776357938947 84 Cre11.g475850 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA2 protein 30775881, ZNJ1 0.775789278377 73 Cre01.g052100 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component 30788991, PRPL18 0.775207715323 74 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 30787751, CGL24 0.775145607552 75 Cre16.g679300 30777569 0.77280242906 76 Cre03.g156050 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 30787296 0.770215776095 78 Cre16.g651923 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CrtISO carotenoid isomerase 30776797 0.769790269662 79 Cre06.g284600 30779991, RBD2 0.769337856636 80 Cre03.g172000 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP reductase 30786866 0.768443347772 81 Cre12.g524500 30793297, RMT2 0.767256471292 90 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 30780063, ALB3 0.766709450949 86 Cre13.g581650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component 30784593, PRPL7 0.765866852987 84 Cre09.g393173 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30780340, ELI2 0.764892685015 90 Cre03.g195650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS10 component 30787464, PRPS10 0.760357897064 86 Cre15.g636750 30783689 0.758456280324 87 Cre13.g580350 30784122 0.754878083627 89 Cre17.g726450 30782107 0.751217957147 90 Cre12.g557050 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 30791805, CPLD8 0.749893100791 91 Cre11.g476750 Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii 30775686, FNR1 0.748902736559 92 Cre01.g039750 Protein biosynthesis.organelle translation machineries.peptide deformylation.PDF formylmethionine deformylase 30788696, PDF1B 0.746916934177 94 Cre13.g588100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 30783969 0.746701618486 95 Cre12.g509050 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein 30791680, PSBP3 0.746096191186 96 Cre01.g017300 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component 30788961, PRPS21 0.744421799567 97 Cre17.g720250 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb4-type component 30782643, LHCB4 0.741775149933 98 Cre12.g494450 30S ribosomal protein S16, chloroplastic OS=Staurastrum punctulatum 30791769, PRPS16 0.739950015398 99