Sequence Description Alias PCC hrr Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 30783498, CHLD 0.970179721018 1 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 30783185, FTSY 0.928590997362 3 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30778583, CHLI1 0.927190194296 9 Cre12.g492350 30792781 0.914462840586 4 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785008, UPD2 0.911950228254 16 Cre04.g231026 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component 30791302, SRP43 0.91172794596 6 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785831, UPD3 0.909770893325 14 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 30780063, ALB3 0.908437469845 8 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 30775504 0.906970225629 9 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 30777054 0.906933604336 13 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30776050, UPD1 0.905994225125 11 Cre06.g303700 30779468 0.903654124968 13 Cre02.g093450 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase(50.4.1 : 437.0) & Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana 30786142, FBA2 0.902948995658 13 Cre01.g045902 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component 30789449 0.898764805593 14 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30791685, CHLI2 0.89502105533 25 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 30790156 0.89382579319 16 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 30787650 0.892151019811 23 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 30778727, CHLG 0.887836390832 21 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 30776945 0.887761148886 19 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 30777907, CMS1 0.883440212034 20 Cre09.g396300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 30781023, PPX1 0.881160329897 21 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 30792635, CGL71 0.880993456878 25 Cre14.g609300 30776640 0.874541732031 23 Cre10.g429150 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.anthranilate phosphoribosyltransferase 30790910, PRT1 0.87297688645 24 Cre01.g017350 30789562 0.872702456171 25 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 30786314, ALAD1 0.870525873136 26 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 30793256 0.868412483373 27 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 30789075 0.863976553693 29 Cre12.g524500 30793297, RMT2 0.863758920642 29 Cre03.g174750 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 30787138, CYN26 0.859686952098 30 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 30789577, POR1 0.85823113354 31 Cre01.g042800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 30789170, DVR1 0.857740801572 32 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II 30775292, KAS2 0.857439635167 33 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 30783049 0.855156923985 34 Cre16.g681900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 30777143, SCY1 0.85458507341 37 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 30783932 0.853938583753 36 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 30789622 0.852738496636 37 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 30778701 0.848483412991 38 Cre12.g554103 30792913, CGL74 0.847542744926 39 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 30774423, PSBP6 0.840662029824 58 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 30791982, PPS2 0.838308539074 49 Cre07.g328075 30775217 0.835417084613 42 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 30790814 0.834276265837 43 Cre08.g377150 30773438 0.832732836265 44 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 30791717 0.831502040322 45 Cre09.g416200 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 30781424, MBB1 0.831318724493 46 Cre03.g155200 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.chorismate mutase 30788064, CHM1 0.829329783509 47 Cre03.g194200 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E1 pyruvate dehydrogenase component.beta subunit 30787000, PDH2 0.828835556298 48 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 30783214, GUN4 0.827557239658 49 Cre03.g206550 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 30787385 0.825618024834 50 Cre13.g576760 30784132 0.825565767704 51 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) 30790817, PRX6 0.825267630935 52 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 30777960, RMT1 0.825071909718 53 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 30786587, GSA1 0.821537137064 54 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 30787386, DLA2 0.821519000396 55 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 30777211 0.818144593865 56 Cre04.g216950 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase III 30791398 0.816649805149 57 Cre03.g145207 30787333, CPLD33 0.816384801552 58 Cre11.g467724 30775910 0.816342880986 59 Cre05.g238322 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 30783171 0.815932934458 60 Cre08.g369000 30773590 0.814874330176 61 Cre12.g490350 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase 30792879, HDS1 0.814457721896 62 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 30787751, CGL24 0.814290973201 63 Cre16.g675500 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 30777333 0.812877399426 64 Cre13.g562750 30784620 0.81262520294 65 Cre06.g269050 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component 30779340 0.810408584047 66 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 30787325 0.809605664246 67 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 30785467 0.809358692557 68 Cre10.g424775 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase 30790129 0.807370951879 69 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 30784921, CPX2 0.806936811946 70 Cre08.g359350 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxylase subunit 30773866 0.805604770471 71 Cre12.g484000 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.carboxyltransferase beta subunit 30792400 0.805183245427 72 Cre06.g300700 30779548 0.805178046347 73 Cre01.g010864 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 30788710 0.805087935772 74 Cre07.g325736 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana 30774660 0.803145137603 75 Cre03.g146567 30787066 0.802433645036 76 Cre02.g143000 Lipid metabolism.glycerolipid synthesis.phosphatidic acid.glycerol-3-phosphate acyltransferase 30785697 0.802033038735 77 Cre12.g531900 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 30791967 0.801632882466 78 Cre09.g388356 Tbc2 translation factor, chloroplastic OS=Chlamydomonas reinhardtii 30780479, TBC2 0.799174134127 79 Cre12.g514200 Protein HOTHEAD OS=Arabidopsis thaliana 30791786 0.798691258719 80 Cre01.g030900 Coenzyme metabolism.phylloquinone synthesis.2-succinylbenzoate:CoA ligase 30788595 0.796267969837 81 Cre11.g467770 Cellular respiration.glycolysis.cytosolic glycolysis.phosphoglycerate kinase 30775977, PGK1 0.796143439335 82 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 30787765, RPI1 0.793797485983 84 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30782338, ANK29 0.793117536667 85 Cre09.g406200 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase 30780926 0.791999340065 86 Cre13.g569700 30784035 0.791290681834 87 Cre10.g433000 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase 30790798 0.790804988252 88 Cre03.g172000 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP reductase 30786866 0.790150831185 89 Cre12.g517900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component 30792082, SCA1 0.789828380687 90 Cre08.g366050 30774169 0.789454181998 91 Cre06.g255500 30779645 0.787349348774 92 Cre10.g435850 30789847, CPLD24 0.787241825966 93 Cre08.g375550 30773638 0.78379216445 94 Cre16.g684350 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana 30777009 0.78376295071 95 Cre03.g152800 30788193 0.782881285363 96 Cre01.g069472 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase 30788955 0.782372856382 97 Cre03.g209841 30787009 0.781429428595 98 Cre06.g269100 30778738 0.780557787226 99 Cre10.g454250 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 30790083 0.779929905331 100