Sequence Description Alias PCC hrr Cpa|evm.model.tig00020554.114 tig00020554_g10891.t1 0.9361162081442772 1 Cpa|evm.model.tig00001229.15 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) tig00001229_g7847.t1 0.9338141348482619 2 Cpa|evm.model.tig00020703.9 26S proteasome non-ATPase regulatory subunit 2 homolog A OS=Arabidopsis thaliana tig00020703_g13111.t1 0.9180357017373819 5 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.9073692040957242 14 Cpa|evm.model.tig00000863.11 Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica tig00000863_g4965.t1 0.9057751985013474 8 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.9020479573859967 27 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.9010863960682766 27 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit tig00000350_g24327.t1 0.89839946819591 20 Cpa|evm.model.tig00000194.23 tig00000194_g14751.t1 0.8974055375631195 27 Cpa|evm.model.tig00020553.162 N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana tig00020553_g10654.t1 0.8969599786358057 11 Cpa|evm.model.tig00000842.16 tig00000842_g4836.t1 0.895378871448498 11 Cpa|evm.model.tig00021589.23 tig00021589_g22731.t1 0.891788952197019 12 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component tig00001339_g8261.t1 0.8912724416432407 24 Cpa|evm.model.tig00021464.38 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS3 membrane-anchor component tig00021464_g21744.t1 0.8906137177663243 14 Cpa|evm.model.tig00000076.86 tig00000076_g2384.t1 0.8901750400282809 15 Cpa|evm.model.tig00000241.37 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4 tig00000241_g20895.t1 0.8901596617333103 18 Cpa|evm.model.tig00000478.39 tig00000478_g1288.t1 0.889995486777092 21 Cpa|evm.model.tig00000704.27 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component tig00000704_g3315.t1 0.8880314084467487 18 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component tig00020554_g10917.t1 0.8873486602622825 20 Cpa|evm.model.tig00021348.94 tig00021348_g20601.t1 0.8870978222315317 68 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase tig00021319_g20232.t1 0.8853903858234632 37 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.8847461439533452 38 Cpa|evm.model.tig00020918.7 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00020918_g15884.t1 0.8842859654836729 23 Cpa|evm.model.tig00020703.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase tig00020703_g13121.t1 0.8835830619428462 24 Cpa|evm.model.tig00000073.33 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.alpha catalytic subunit tig00000073_g1715.t2 0.8827705040010936 25 Cpa|evm.model.tig00001038.20 tig00001038_g6529.t1 0.8826109245248254 26 Cpa|evm.model.tig00001049.12 tig00001049_g6662.t1 0.8817036841416628 56 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component tig00021589_g22732.t1 0.8797746696774035 51 Cpa|evm.model.tig00020903.26 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 37.8) tig00020903_g15093.t1 0.8775803394495644 29 Cpa|evm.model.tig00000203.33 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL15 component tig00000203_g17140.t1 0.8763853618930808 30 Cpa|evm.model.tig00021352.5 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component tig00021352_g20674.t1 0.8757396020111317 31 Cpa|evm.model.tig00000829.12 tig00000829_g4655.t2 0.8747535512299038 32 Cpa|evm.model.tig00000037.7 Protein modification.lipidation.Glycophosphatidylinositol (GPI)-anchor addition.GPI transamidase complex.PIG-U component tig00000037_g10074.t1 0.8747321846067879 33 Cpa|evm.model.tig00000789.42 tig00000789_g4135.t1 0.8726984230329448 34 Cpa|evm.model.tig00000944.41 Oxysterol-binding protein-related protein 3C OS=Arabidopsis thaliana tig00000944_g5963.t1 0.8714404706738357 36 Cpa|evm.model.tig00001093.6 Synaptotagmin-5 OS=Arabidopsis thaliana tig00001093_g6881.t1 0.8711325882454078 37 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component tig00000402_g218.t1 0.8710313037915005 38 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.8701705101502589 94 Cpa|evm.model.tig00000704.59 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor tig00000704_g3345.t1 0.8699429465022281 40 Cpa|evm.model.tig00001049.11 tig00001049_g6661.t1 0.8693365569970478 41 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein tig00001206_g7507.t1 0.8686406576384559 42 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor tig00000829_g4659.t1 0.8685408005067968 74 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana tig00020554_g10934.t2 0.8675365804216246 45 Cpa|evm.model.tig00021127.22 tig00021127_g18698.t1 0.8667347330461662 45 Cpa|evm.model.tig00000144.11 tig00000144_g9000.t1 0.8643788500157569 46 Cpa|evm.model.tig00000615.62 tig00000615_g2591.t1 0.8640762811319381 47 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component tig00000037_g10102.t1 0.8639803318661197 48 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter tig00000194_g14776.t1 0.8638873589436422 49 Cpa|evm.model.tig00021357.7 tig00021357_g20740.t1 0.8633158888009268 50 Cpa|evm.model.tig00000194.40 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component tig00000194_g14768.t1 0.8632439431724783 51 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component tig00000944_g5945.t1 0.8632382035635385 52 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component tig00000319_g24143.t1 0.8628234856925471 63 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase tig00001107_g7096.t1 0.861317335390478 94 Cpa|evm.model.tig00000128.3 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component tig00000128_g7203.t1 0.8593210479868634 55 Cpa|evm.model.tig00020544.6 tig00020544_g10486.t1 0.8592088375673509 56 Cpa|evm.model.tig00001049.5 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.proline.main pathway.pyrroline-5-carboxylate synthetase tig00001049_g6656.t1 0.8581288060558463 57 Cpa|evm.model.tig00000203.29 tig00000203_g17136.t1 0.8581015954466529 58 Cpa|evm.model.tig00021319.64 tig00021319_g20256.t1 0.8577264692308133 59 Cpa|evm.model.tig00020554.162 tig00020554_g10941.t1 0.8576426001768851 61 Cpa|evm.model.tig00000203.22 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate reductase tig00000203_g17127.t1 0.8575996882098383 62 Cpa|evm.model.tig00000217.17 Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris tig00000217_g19152.t1 0.8570079767150911 63 Cpa|evm.model.tig00000944.35 tig00000944_g5958.t1 0.8562203389321967 64 Cpa|evm.model.tig00021682.8 Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica tig00021682_g23098.t1 0.8552881069354419 65 Cpa|evm.model.tig00000718.68 tig00000718_g3740.t1 0.8551307795241152 66 Cpa|evm.model.tig00021589.34 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component tig00021589_g22741.t1 0.8529737124204216 67 Cpa|evm.model.tig00021432.27 tig00021432_g21219.t1 0.8519042943694967 69 Cpa|evm.model.tig00021348.18 tig00021348_g20520.t1 0.8505192695494791 70 Cpa|evm.model.tig00000983.13 tig00000983_g5904.t1 0.8497869098126271 72 Cpa|evm.model.tig00000842.29 tig00000842_g4848.t1 0.8486259870865156 73 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica tig00000383_g24645.t1 0.8480198831936749 74 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component tig00020703_g13111.t1 0.8477281405276248 81 Cpa|evm.model.tig00001164.24 tig00001164_g7414.t1 0.8475170444787588 77 Cpa|evm.model.tig00000944.42 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.aspartate-semialdehyde dehydrogenase tig00000944_g5964.t1 0.8467889131501227 79 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.8463959836720798 80 Cpa|evm.model.tig00000525.12 Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus tig00000525_g1955.t1 0.8460883485419427 81 Cpa|evm.model.tig00021234.15 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component tig00021234_g19389.t1 0.8455898797034868 82 Cpa|evm.model.tig00020553.139 tig00020553_g10629.t1 0.8451109292241169 98 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit tig00000217_g19167.t1 0.8450190202951466 84 Cpa|evm.model.tig00020848.42 tig00020848_g14571.t1 0.8432280753777628 85 Cpa|evm.model.tig00001466.9 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-7 component tig00001466_g8787.t1 0.8425983732277704 87 Cpa|evm.model.tig00021464.34 RNA processing.RNA decay.exosome complex.EXO9 core complex.CSL4 component tig00021464_g21739.t1 0.8418915726474716 88 Cpa|evm.model.tig00020531.49 tig00020531_g10055.t1 0.8417549933227583 89 Cpa|evm.model.tig00000912.6 Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.Pex5 component tig00000912_g5412.t1 0.8413508423311254 90 Cpa|evm.model.tig00001229.16 Enzyme classification.EC_2 transferases.EC_2.6 transferase transferring nitrogenous group(50.2.6 : 385.6) & Tyrosine aminotransferase OS=Arabidopsis thaliana tig00001229_g7850.t1 0.8404558249982838 91 Cpa|evm.model.tig00000704.62 tig00000704_g3346.t2 0.8392683691988027 92 Cpa|evm.model.tig00000981.29 tig00000981_g5883.t1 0.8390787929351703 93 Cpa|evm.model.tig00020537.64 tig00020537_g10289.t1 0.8383833357144326 94 Cpa|evm.model.tig00021350.40 tig00021350_g20656.t1 0.8375331337516714 99 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein tig00000829_g4658.t1 0.8369097421232033 97 Cpa|evm.model.tig00000037.2 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate aminotransferase tig00000037_g10069.t2 0.8368239416845668 98 Cpa|evm.model.tig00000342.28 tig00000342_g24213.t1 0.8362811006118188 100