Sequence Description Alias PCC hrr Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component tig00020703_g13111.t1 0.93847594523045 2 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component tig00000402_g218.t1 0.9315268421551338 2 Cpa|evm.model.tig00021348.94 tig00021348_g20601.t1 0.9223147678232111 11 Cpa|evm.model.tig00021357.9 tig00021357_g20742.t1 0.9202332655920487 4 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component tig00000829_g4645.t1 0.9169830037430214 5 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.9103745184863662 15 Cpa|evm.model.tig00021350.40 tig00021350_g20656.t1 0.909566908766778 7 Cpa|evm.model.tig00000829.11 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana tig00000829_g4654.t1 0.9089480579967032 11 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase tig00021319_g20232.t1 0.9041560749184934 14 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase tig00000912_g5432.t1 0.8998876072260319 32 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.8966648187006293 23 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana tig00000241_g20884.t1 0.8949429498330779 13 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.8876384310869488 71 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana tig00000076_g2403.t1 0.8868432839303553 14 Cpa|evm.model.tig00000829.20 Protein degradation.ER-associated protein degradation (ERAD) machinery.DFM1 component tig00000829_g4662.t1 0.8853927123835725 15 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit tig00000789_g4131.t1 0.8808247910677581 31 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana tig00000802_g4296.t1 0.8802093583977828 25 Cpa|evm.model.tig00000615.76 tig00000615_g2606.t1 0.8800175181500103 18 Cpa|evm.model.tig00021464.57 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00021464_g21760.t1 0.8788335030994406 19 Cpa|evm.model.tig00000692.13 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-14 motor protein tig00000692_g3207.t1 0.8780575417202244 20 Cpa|evm.model.tig00021464.26 tig00021464_g21733.t1 0.876630668839901 21 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana tig00020554_g10934.t2 0.8742022709849596 35 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein tig00020553_g10655.t1 0.8722626919415729 53 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component tig00000350_g24315.t1 0.8721853569104119 69 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.8721615103960613 69 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.8720885758834772 54 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.870767389184781 96 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.8690836845358125 86 Cpa|evm.model.tig00000789.45 tig00000789_g4139.t1 0.8669478414164643 36 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.8645848580829217 98 Cpa|evm.model.tig00021319.62 tig00021319_g20254.t1 0.8645802308037567 33 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase tig00000829_g4671.t1 0.8642432781307696 95 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.8638986108327253 97 Cpa|evm.model.tig00020703.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase tig00020703_g13121.t1 0.8632560074986534 36 Cpa|evm.model.tig00000944.35 tig00000944_g5958.t1 0.862772183714524 37 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component tig00021612_g22890.t1 0.862686955023488 68 Cpa|evm.model.tig00022075.35 tig00022075_g23597.t1 0.8616467996557069 97 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit tig00000350_g24327.t1 0.8614660373524305 86 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.8603544197086053 92 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component tig00020554_g10917.t1 0.859712672158049 61 Cpa|evm.model.tig00000388.25 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component tig00000388_g24787.t1 0.8587907415548671 46 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor tig00000383_g24650.t1 0.85729468487633 48 Cpa|evm.model.tig00020903.19 tig00020903_g15087.t1 0.8508271289289008 53 Cpa|evm.model.tig00020848.28 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 170.4) & Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana tig00020848_g14555.t1 0.8502398049088228 95 Cpa|evm.model.tig00021357.6 tig00021357_g20739.t1 0.8488623858579407 62 Cpa|evm.model.tig00000073.33 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.alpha catalytic subunit tig00000073_g1715.t2 0.8468790526796758 58 Cpa|evm.model.tig00020553.150 tig00020553_g10641.t1 0.8465472835251832 59 Cpa|evm.model.tig00000704.63 tig00000704_g3347.t1 0.8450190202951466 84 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin tig00000789_g4137.t1 0.8447908025789302 61 Cpa|evm.model.tig00020703.9 26S proteasome non-ATPase regulatory subunit 2 homolog A OS=Arabidopsis thaliana tig00020703_g13111.t1 0.8447580573261401 85 Cpa|evm.model.tig00000241.32 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component tig00000241_g20890.t1 0.8443095419616554 63 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana tig00000217_g19158.t1 0.8435923864315733 67 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein tig00001206_g7507.t1 0.843272970176751 91 Cpa|evm.model.tig00022075.25 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase tig00022075_g23589.t1 0.8429097309434364 68 Cpa|evm.model.tig00000852.42 tig00000852_g5051.t1 0.841013709952727 71 Cpa|evm.model.tig00000852.43 tig00000852_g5052.t1 0.8405099804534055 72 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.840329277531272 73 Cpa|evm.model.tig00000789.42 tig00000789_g4135.t1 0.840321000583077 75 Cpa|evm.model.tig00000157.110 Cullin-4 OS=Arabidopsis thaliana tig00000157_g9709.t1 0.8397247651256465 76 Cpa|evm.model.tig00020903.26 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 37.8) tig00020903_g15093.t1 0.8373795220619793 78 Cpa|evm.model.tig00001229.16 Enzyme classification.EC_2 transferases.EC_2.6 transferase transferring nitrogenous group(50.2.6 : 385.6) & Tyrosine aminotransferase OS=Arabidopsis thaliana tig00001229_g7850.t1 0.8350110669935615 84 Cpa|evm.model.tig00000555.1 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor tig00000555_g2127.t1 0.8348224645183603 85 Cpa|evm.model.tig00020592.38 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit tig00020592_g11671.t1 0.8303971397381248 92 Cpa|evm.model.tig00020903.33 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit tig00020903_g15100.t1 0.8288715733396351 95 Cpa|evm.model.tig00000203.29 tig00000203_g17136.t1 0.8256967678192574 99 Cpa|evm.model.tig00000402.20 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).Ku70-Ku80 helicase complex.KU70 component tig00000402_g197.t1 0.8246178263534533 100