Sequence Description Alias PCC hrr Cre10.g444550 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease 30790201, SPP1 0.808352080399 5 Cre13.g580300 ABC transporter I family member 19 OS=Arabidopsis thaliana 30783939 0.793618910269 9 Cre16.g679250 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30778123, ELI1 0.793545080681 5 Cre10.g429800 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30790836, COQ8 0.785524869019 11 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 30784500 0.768712087605 20 Cre08.g381516 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 30773746 0.767437276859 6 Cre05.g246552 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 30783180 0.766820513859 16 Cre13.g571560 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component 30784416 0.76012527104 8 Cre14.g610850 30776623 0.752191592355 10 Cre17.g720050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 30782442, FHL2 0.751376861711 16 Cre02.g078939 Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri 30785814 0.749045685083 15 Cre01.g053850 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 30788730 0.739591665679 12 Cre08.g384650 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30773689 0.737811429424 20 Cre05.g242400 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component 30783113 0.731840422998 14 Cre17.g731050 ABC transporter I family member 20 OS=Arabidopsis thaliana 30782523 0.730582786274 26 Cre06.g310500 External stimuli response.light.UV-B light.UV-B signal transduction transcriptional regulator 30778677 0.722535842224 16 Cre03.g144184 30787422 0.716829278597 26 Cre12.g485800 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 30791981, FHL1 0.708359481139 25 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) 30776413 0.705389784985 42 Cre08.g358538 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase 30773892 0.705181626603 29 Cre03.g145587 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana 30787749, CPLD1 0.703262215805 21 Cre17.g740950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 30782702 0.702504598338 22 Cre16.g690350 30777415 0.694780209217 23 Cre06.g266900 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 30780099 0.691237497159 27 Cre12.g558550 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 30792828 0.689065941335 33 Cre08.g379550 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter 30773714 0.688135378729 26 Cre06.g281250 30779403, CFA1 0.678906530936 27 Cre10.g439000 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 30790389 0.675649508683 64 Cre01.g055151 30789005 0.665642419048 63 Cre06.g274650 30780126 0.665166573097 60 Cre13.g587500 Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica 30784280 0.664024259038 31 Cre03.g207150 30788167 0.657649182558 69 Cre07.g320450 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30775051 0.653228486474 36 Cre09.g398252 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 30780830 0.652722988794 87 Cre09.g411200 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein 30780556, TEF5 0.652659319835 52 Cre16.g677800 30777487 0.649267740999 39 Cre01.g016150 30789476 0.646167077209 41 Cre02.g085050 E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 30785833 0.645718296415 93 Cre04.g221550 30791030 0.641008831649 44 Cre08.g360801 30773927 0.638047266757 45 Cre08.g358540 30773410 0.63424935135 53 Cre16.g673001 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase 30777614 0.633479594168 55 Cre02.g113550 30785672 0.632562901208 98 Cre17.g733162 30782479 0.630294439078 75 Cre16.g686400 30777095 0.628279433231 51 Cre04.g215050 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid beta ring hydroxylase 30791351 0.624820619692 52 Cre09.g407200 Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 30780595 0.622028877127 62 Cre13.g562850 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein 30784232, THF1 0.618873976398 73 Cre01.g028600 Tropinone reductase homolog At2g29290 OS=Arabidopsis thaliana 30788633 0.615026704983 59 Cre09.g394325 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30780217, ELI3 0.6046541126 65 Cre12.g498700 30792346, CPLD13 0.602488110216 67 Cre06.g261500 30778859 0.595618018436 87 Cre07.g320400 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30774456 0.593416176711 76 Cre06.g251150 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP2 protein 30779394, OHP1 0.591707436614 78 Cre09.g393900 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 213.2) & Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Oryza sativa subsp. japonica 30780989 0.591360264657 80 Cre08.g360850 30773941 0.590005060977 83 Cre10.g461900 Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana 30790205 0.588484108382 82 Cre08.g380000 30773887 0.584219387911 84 Cre01.g016750 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein 30788600 0.576555195821 86 Cre02.g142146 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 30785153 0.569071594361 88 Cre08.g365900 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LhcSR-dependent machinery.LhcSR protein 30773702, LHCSR1 0.567803775205 92