Sequence Description Alias PCC hrr Cpa|evm.model.tig00001229.8 tig00001229_g7840.t1 0.9658265448241399 1 Cpa|evm.model.tig00021318.25 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor tig00021318_g20145.t1 0.9542361246425127 2 Cpa|evm.model.tig00020830.55 tig00020830_g14438.t1 0.9455541965533311 3 Cpa|evm.model.tig00000342.56 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.MPBQ methyltransferase (VTE3) tig00000342_g24240.t1 0.9272611737592346 5 Cpa|evm.model.tig00000849.28 tig00000849_g4768.t1 0.9156002617864885 6 Cpa|evm.model.tig00000944.16 RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana tig00000944_g5937.t1 0.9131074422346506 8 Cpa|evm.model.tig00000498.40 Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00000498_g1616.t1 0.9108586028973396 7 Cpa|evm.model.tig00000093.128 tig00000093_g3556.t1 0.9099065277938551 19 Cpa|evm.model.tig00021037.8 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase tig00021037_g17413.t1 0.9091299552605381 9 Cpa|evm.model.tig00001408.12 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic glucanotransferase tig00001408_g8607.t1 0.9041689729475412 25 Cpa|evm.model.tig00000792.24 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein tig00000792_g4173.t1 0.901856313581198 21 Cpa|evm.model.tig00000870.34 NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum tig00000870_g5150.t1 0.8972386814381884 12 Cpa|evm.model.tig00000241.142 Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum tig00000241_g21007.t1 0.8964971257274664 13 Cpa|evm.model.tig00000219.42 tig00000219_g19481.t1 0.89596994900377 14 Cpa|evm.model.tig00021569.2 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 321.7) & Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp. indica tig00021569_g22333.t1 0.895057183291128 28 Cpa|evm.model.tig00000498.41 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase tig00000498_g1616.t1 0.8949794822069724 16 Cpa|evm.model.tig00000403.33 tig00000403_g289.t1 0.8942095433418602 17 Cpa|evm.model.tig00020592.44 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020592_g11677.t1 0.8921076753872 18 Cpa|evm.model.tig00020610.123 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma tig00020610_g12068.t1 0.8912609334152053 19 Cpa|evm.model.tig00000944.28 Fructose-1,6-bisphosphatase, cytosolic OS=Brassica napus tig00000944_g5952.t1 0.8901224197138748 23 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.889406513734102 21 Cpa|evm.model.tig00000219.71 Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana tig00000219_g19507.t1 0.8893646116812264 32 Cpa|evm.model.tig00000792.56 tig00000792_g4206.t1 0.8884355421665316 23 Cpa|evm.model.tig00020614.77 tig00020614_g12191.t1 0.8877303690126811 24 Cpa|evm.model.tig00000658.25 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum tig00000658_g2915.t1 0.8846091878844589 25 Cpa|evm.model.tig00020614.46 ABC transporter A family member 4 OS=Arabidopsis thaliana tig00020614_g12159.t1 0.8834757331563858 26 Cpa|evm.model.tig00021179.40 Carotenoid cleavage dioxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica tig00021179_g19254.t1 0.8825677454921157 47 Cpa|evm.model.tig00020538.32 tig00020538_g10336.t1 0.8823897357518613 31 Cpa|evm.model.tig00000055.1 tig00000055_g20101.t1 0.8812147089751958 32 Cpa|evm.model.tig00021127.122 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic OS=Arabidopsis thaliana tig00021127_g18802.t1 0.8796063000692061 30 Cpa|evm.model.tig00021318.33 tig00021318_g20151.t1 0.8725062998468472 58 Cpa|evm.model.tig00000718.3 ABC transporter C family member 6 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8721368319979373 40 Cpa|evm.model.tig00000430.41 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) tig00000430_g628.t1 0.8719803093922467 33 Cpa|evm.model.tig00020601.10 tig00020601_g11717.t1 0.8712923778319142 34 Cpa|evm.model.tig00000459.55 AAA-ATPase At3g28600 OS=Arabidopsis thaliana tig00000459_g1119.t1 0.8710812996298304 35 Cpa|evm.model.tig00000792.58 tig00000792_g4209.t1 0.8706413523568525 39 Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.8673316606823986 71 Cpa|evm.model.tig00020943.5 tig00020943_g16247.t1 0.8670418650815866 46 Cpa|evm.model.tig00020825.7 tig00020825_g14288.t1 0.8661589608869448 39 Cpa|evm.model.tig00021038.91 tig00021038_g17580.t1 0.8651752273918327 40 Cpa|evm.model.tig00020660.28 tig00020660_g12525.t1 0.8647274892795583 41 Cpa|evm.model.tig00020830.32 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.cpTatC component tig00020830_g14413.t1 0.864369795460196 51 Cpa|evm.model.tig00001155.6 tig00001155_g7314.t1 0.8638853212026756 43 Cpa|evm.model.tig00021373.7 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase tig00021373_g21074.t1 0.8628893217999252 44 Cpa|evm.model.tig00000718.2 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8621158208064094 65 Cpa|evm.model.tig00020614.73 tig00020614_g12187.t1 0.8618166924734533 64 Cpa|evm.model.tig00021332.11 tig00021332_g20327.t1 0.8617846256693718 58 Cpa|evm.model.tig00020943.6 tig00020943_g16248.t1 0.8612404168934196 48 Cpa|evm.model.tig00001537.12 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component tig00001537_g9305.t1 0.859655242454761 49 Cpa|evm.model.tig00001033.3 tig00001033_g6484.t1 0.8592923543479138 50 Cpa|evm.model.tig00020572.24 Lipid metabolism.glycerolipid synthesis.cardiolipin.cardiolipin synthase tig00020572_g11544.t1 0.8592419141340878 51 Cpa|evm.model.tig00000555.20 tig00000523_g1875.t1 0.8590805176039784 52 Cpa|evm.model.tig00001033.18 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit a tig00001033_g6498.t1 0.8573787958887099 53 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.8572256859718588 97 Cpa|evm.model.tig00001368.10 Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica tig00001368_g8409.t1 0.8567668444745404 55 Cpa|evm.model.tig00020553.195 tig00020553_g10685.t1 0.8567226091167401 56 Cpa|evm.model.tig00000802.18 tig00000802_g4269.t1 0.8557023707287431 57 Cpa|evm.model.tig00000144.22 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.alpha subunit tig00000144_g9011.t1 0.8556730867955734 58 Cpa|evm.model.tig00001368.12 Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana tig00001368_g8411.t1 0.8555244639512763 59 Cpa|evm.model.tig00021463.12 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) tig00021463_g21620.t1 0.8548042124260954 60 Cpa|evm.model.tig00000605.31 tig00000605_g2497.t1 0.8536956707150025 61 Cpa|evm.model.tig00020943.67 Enzyme classification.EC_1 oxidoreductases.EC_1.6 oxidoreductase acting on NADH or NADPH(50.1.6 : 384.6) & NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana tig00020943_g16307.t1 0.8533418596045855 65 Cpa|evm.model.tig00021350.15 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica tig00021350_g20632.t1 0.8530989606298839 74 Cpa|evm.model.tig00020675.17 tig00020675_g12598.t1 0.852986928566662 64 Cpa|evm.model.tig00000169.32 (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum tig00000169_g11904.t1 0.8513384035474002 65 Cpa|evm.model.tig00020952.7 ABC transporter B family member 2 OS=Arabidopsis thaliana tig00020952_g16473.t1 0.8511335620985803 66 Cpa|evm.model.tig00020604.16 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic phosphoglucose isomerase tig00020604_g11851.t1 0.8484537827145049 67 Cpa|evm.model.tig00000219.43 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase tig00000219_g19482.t1 0.8477546530865233 68 Cpa|evm.model.tig00000342.50 tig00000342_g24234.t1 0.845082453606764 69 Cpa|evm.model.tig00000821.11 tig00000821_g4470.t1 0.8411095797132699 71 Cpa|evm.model.tig00020710.100 tig00020710_g13365.t1 0.8402322123290625 86 Cpa|evm.model.tig00000073.62 tig00000073_g1745.t1 0.839496972686637 85 Cpa|evm.model.tig00000403.95 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 99.4) & Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana tig00000403_g355.t1 0.8392633494557242 88 Cpa|evm.model.tig00000655.56 tig00000655_g2885.t1 0.8392609081240775 75 Cpa|evm.model.tig00001030.22 Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum tig00001030_g6462.t1 0.8382210208740403 76 Cpa|evm.model.tig00000851.2 tig00000851_g4886.t1 0.8376745617623405 77 Cpa|evm.model.tig00000955.26 tig00000955_g5802.t1 0.8376707170384393 78 Cpa|evm.model.tig00001093.1 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana tig00001093_g6876.t1 0.8370441927618296 79 Cpa|evm.model.tig00000630.10 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase tig00000630_g2688.t1 0.8369155068776546 80 Cpa|evm.model.tig00001299.9 tig00001299_g8068.t1 0.836892189587858 81 Cpa|evm.model.tig00021432.19 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme tig00021432_g21211.t1 0.8338178566137915 82 Cpa|evm.model.tig00020943.56 tig00020943_g16299.t1 0.8325010798038838 83 Cpa|evm.model.tig00001071.12 tig00001071_g6803.t1 0.8309247826337094 84 Cpa|evm.model.tig00000076.15 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type) tig00000076_g2315.t1 0.8308182898646532 99 Cpa|evm.model.tig00020611.12 tig00000073_g1745.t1 0.8303639675115618 86 Cpa|evm.model.tig00021501.21 tig00021501_g21959.t1 0.8298993760874507 87 Cpa|evm.model.tig00001576.14 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase tig00001576_g9370.t1 0.8293556993843335 88 Cpa|evm.model.tig00000882.20 tig00000882_g5265.t1 0.8291800664295153 89 Cpa|evm.model.tig00020614.38 tig00020614_g12151.t1 0.8291198341507443 90 Cpa|evm.model.tig00000711.21 Lipid metabolism.phytosterols.campesterol synthesis.sterol delta14 reductase tig00000711_g3381.t1 0.8280470942486754 93 Cpa|evm.model.tig00001339.13 tig00001339_g8269.t1 0.8276639546545729 94 Cpa|evm.model.tig00000076.165 tig00000076_g2456.t1 0.8275306623224223 95 Cpa|evm.model.tig00000718.34 tig00000718_g3709.t1 0.826560200761092 96 Cpa|evm.model.tig00020562.40 Probable transcriptional regulatory protein At2g25830 OS=Arabidopsis thaliana tig00020562_g11165.t1 0.8263111525771542 97 Cpa|evm.model.tig00000870.9 tig00000870_g5127.t1 0.8261203771418039 98 Cpa|evm.model.tig00001154.27 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase tig00001154_g7291.t1 0.8258951763050777 99 Cpa|evm.model.tig00000523.52 tig00000523_g1875.t1 0.8258540111939043 100