Sequence Description Alias PCC hrr Cpa|evm.model.tig00000704.42 tig00000704_g3329.t1 0.924801912415283 1 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.9169756511533343 19 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component tig00021435_g21395.t1 0.9144594600359071 4 Cpa|evm.model.tig00001003.26 tig00001003_g6283.t1 0.8992426523772801 6 Cpa|evm.model.tig00021179.67 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster J phosphatase tig00021179_g19282.t1 0.897689793099804 5 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase tig00001107_g7096.t1 0.8975316929585112 31 Cpa|evm.model.tig00021612.39 tig00021612_g22881.t1 0.8968262459916001 11 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component tig00001542_g9329.t1 0.8944984387300859 31 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component tig00021571_g22362.t1 0.8926378485910261 20 Cpa|evm.model.tig00000217.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component tig00000217_g19155.t1 0.8924328187981772 10 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.8911134319866072 29 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component tig00020903_g15104.t1 0.8909644965062052 14 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.89087064003065 75 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.8905417630902588 19 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.8900141571017726 28 Cpa|evm.model.tig00021464.32 tig00021464_g21737.t1 0.8896407682539689 16 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component tig00022075_g23612.t1 0.8894326188445284 18 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.8876239047199745 96 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.8873680739879988 70 Cpa|evm.model.tig00000383.54 Uncharacterized protein At2g34160 OS=Arabidopsis thaliana tig00000383_g24668.t1 0.8855072010528326 20 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.885497599208393 55 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.8833236496705864 53 Cpa|evm.model.tig00021352.44 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana tig00021352_g20712.t1 0.8831029093338616 23 Cpa|evm.model.tig00021433.16 tig00021433_g21270.t1 0.8811118837501902 24 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.8804390277972591 41 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.8798534079064317 75 Cpa|evm.model.tig00021290.10 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.MAD2 checkpoint protein tig00021290_g19972.t1 0.8791008532641031 27 Cpa|evm.model.tig00021489.11 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 430.9) & Serine/threonine-protein kinase AtPK1/AtPK6 OS=Arabidopsis thaliana tig00021489_g21658.t1 0.8778430740695565 28 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.8776239083552654 56 Cpa|evm.model.tig00020684.43 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component tig00020684_g12891.t1 0.8763160397691148 39 Cpa|evm.model.tig00020554.143 0.8762166442538486 31 Cpa|evm.model.tig00001333.27 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component tig00001333_g8197.t1 0.8760802301999631 32 Cpa|evm.model.tig00020903.28 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.DCP1 regulatory component tig00020903_g15094.t1 0.8751502444333062 33 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana tig00021464_g21723.t1 0.8744913699708369 36 Cpa|evm.model.tig00020538.71 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component tig00020538_g10377.t1 0.8742817552287583 35 Cpa|evm.model.tig00000241.145 tig00000241_g21010.t1 0.8736553388832315 36 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component tig00000944_g5943.t1 0.873621663282639 42 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.8736138667150173 97 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor tig00000829_g4659.t1 0.8729570592997121 62 Cpa|evm.model.tig00000402.13 Kinesin-like protein KIN-1 OS=Arabidopsis thaliana tig00000402_g191.t1 0.8727722733725896 40 Cpa|evm.model.tig00000863.29 tig00000863_g4983.t1 0.8724186029769981 41 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component tig00000829_g4645.t1 0.8721429836021215 50 Cpa|evm.model.tig00000144.174 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana tig00000144_g9167.t1 0.8720461422244798 43 Cpa|evm.model.tig00000144.7 tig00000144_g8997.t1 0.8712107476993514 44 Cpa|evm.model.tig00000615.68 Ras-related protein RABA4a OS=Arabidopsis thaliana tig00000615_g2598.t1 0.8707821178486168 85 Cpa|evm.model.tig00000980.3 RNA biosynthesis.transcriptional activation.TUB transcription factor tig00000980_g6128.t1 0.8705007409563807 46 Cpa|evm.model.tig00020629.95 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana tig00020629_g12416.t1 0.8680216750658921 53 Cpa|evm.model.tig00021351.15 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component tig00021352_g20674.t1 0.8672520349581603 48 Cpa|evm.model.tig00021319.69 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00021319_g20261.t1 0.86559252079903 50 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.8652212643362879 98 Cpa|evm.model.tig00020816.63 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).PRPF3 snRNP-associated protein tig00020816_g14151.t1 0.8640615128307667 52 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.8622281765283047 100 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana tig00020684_g12880.t1 0.8619656230428985 56 Cpa|evm.model.tig00001098.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component tig00001098_g7056.t1 0.8609971803195217 56 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.8608580851753542 90 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein tig00000144_g9007.t1 0.8608502707521083 58 Cpa|evm.model.tig00021348.85 tig00021348_g20594.t1 0.8602038605538828 59 Cpa|evm.model.tig00020875.12 Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii tig00020875_g14889.t1 0.8594441609496998 60 Cpa|evm.model.tig00000042.17 Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana tig00000042_g15403.t1 0.8584767008328998 61 Cpa|evm.model.tig00000842.19 Cell cycle.cytokinesis.phragmoplast microtubule organization.TIO Kinesin-12-regulating kinase tig00000842_g4839.t1 0.8584066138868306 62 Cpa|evm.model.tig00000480.14 tig00000480_g1298.t1 0.8578462028221677 63 Cpa|evm.model.tig00021591.6 tig00021591_g22792.t1 0.8578069150114097 64 Cpa|evm.model.tig00000241.58 tig00000241_g20916.t1 0.8576401654363474 65 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.8575821652516967 85 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.8575582023983741 94 Cpa|evm.model.tig00021326.40 tig00021326_g20304.t1 0.8551334777691255 69 Cpa|evm.model.tig00020553.160 tig00020553_g10652.t1 0.8550100565625052 70 Cpa|evm.model.tig00001590.1 tig00001590_g9373.t1 0.8543679527612378 71 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component tig00020553_g10649.t1 0.8542186584516438 96 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.8541828607569748 91 Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component tig00000545_g1991.t1 0.852695985810243 75 Cpa|evm.model.tig00001160.15 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component tig00001160_g7349.t1 0.8518402190283487 77 Cpa|evm.model.tig00020554.44 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component tig00020554_g10827.t1 0.8517668886700265 78 Cpa|evm.model.tig00021017.29 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC1 component tig00021017_g17203.t1 0.850687979030551 79 Cpa|evm.model.tig00020614.5 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component tig00020614_g12118.t1 0.8501518051093524 80 Cpa|evm.model.tig00000241.116 tig00000241_g20982.t1 0.8497399634451351 91 Cpa|evm.model.tig00000829.13 tig00000829_g4656.t1 0.8491802980180626 82 Cpa|evm.model.tig00000789.46 tig00000789_g4140.t1 0.8489850289625315 83 Cpa|evm.model.tig00001003.6 Vacuolar protein sorting-associated protein 52 A OS=Arabidopsis thaliana tig00001003_g6264.t1 0.8487264809833079 84 Cpa|evm.model.tig00020918.7 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00020918_g15884.t1 0.8479839198267802 86 Cpa|evm.model.tig00021464.58 tig00021464_g21761.t1 0.8479264900282552 87 Cpa|evm.model.tig00000361.69 tig00000361_g24422.t1 0.8470121243669385 88 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase tig00000203_g17139.t1 0.8468031284172561 94 Cpa|evm.model.tig00001590.11 tig00001590_g9383.t1 0.8465901247559015 90 Cpa|evm.model.tig00000203.22 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate reductase tig00000203_g17127.t1 0.8452840991813942 93 Cpa|evm.model.tig00020614.111 Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana tig00020614_g12228.t1 0.8451757794562205 94 Cpa|evm.model.tig00020554.144 0.844594754603519 100 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component tig00000808_g4429.t1 0.8439415294478879 98 Cpa|evm.model.tig00000157.60 Ras-related protein RABD1 OS=Arabidopsis thaliana tig00000157_g9647.t1 0.8432136860387544 100