Sequence Description Alias PCC hrr Cpa|evm.model.tig00001376.11 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcdA component tig00001376_g8532.t1 0.9420676335083523 2 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9287883001253843 27 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.9264766830928538 19 Cpa|evm.model.tig00000551.3 tig00000551_g2024.t1 0.9255867094398313 10 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.9214263056545738 7 Cpa|evm.model.tig00001024.27 tig00001024_g6335.t1 0.9162745080578651 6 Cpa|evm.model.tig00000718.1 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.9161356814816334 7 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.9160248457224874 41 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.9108074873664506 31 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.9051692902742776 46 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9014052010770842 66 Cpa|evm.model.tig00001024.2 ABC transporter C family member 14 OS=Arabidopsis thaliana tig00001729_g9740.t1 0.9003173981579341 12 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.8991486068713058 69 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.8986803108620787 62 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.8981985049221533 68 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.8981782796875758 63 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana tig00020592_g11633.t1 0.8972464325925192 40 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.8969862437051742 36 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.8954982885032687 39 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.8947570133188524 72 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.8941490233836421 89 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.8937208823359214 52 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.8920851009540225 24 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8915739394583774 53 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.8912735264883257 80 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.8891246688907548 98 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.8876090758469647 98 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.8874377981428598 58 Cpa|evm.model.tig00000900.25 tig00000900_g5382.t1 0.8872394865527755 29 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.8867713796892638 73 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8850912800786573 46 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.8840279714706192 62 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.8839252417745767 94 Cpa|evm.model.tig00000042.43 Histidine kinase 3 OS=Arabidopsis thaliana tig00000042_g15436.t1 0.8839238834600369 34 Cpa|evm.model.tig00021796.8 tig00021796_g23559.t1 0.8826460923580736 35 Cpa|evm.model.tig00021582.39 ABC transporter G family member 22 OS=Arabidopsis thaliana tig00021582_g22636.t1 0.8812217076065911 36 Cpa|evm.model.tig00001095.9 Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana tig00001095_g7025.t1 0.8778734364683046 37 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.8773132280741193 77 Cpa|evm.model.tig00000142.17 tig00000142_g8652.t1 0.8771140496216153 39 Cpa|evm.model.tig00001532.3 tig00001532_g9269.t1 0.8769133657447117 40 Cpa|evm.model.tig00020911.11 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana tig00020911_g15711.t1 0.8757785030155061 42 Cpa|evm.model.tig00000219.71 Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana tig00000219_g19507.t1 0.8741958455433558 53 Cpa|evm.model.tig00000553.47 tig00000553_g2121.t1 0.8740959948548298 44 Cpa|evm.model.tig00020902.80 tig00020902_g15035.t1 0.8718690780536482 45 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.8716405351547493 94 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.8714351610650394 99 Cpa|evm.model.tig00000980.32 tig00000980_g6160.t1 0.8714285580448496 48 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.870560732868076 97 Cpa|evm.model.tig00020930.19 tig00020930_g16029.t1 0.8669999876786567 53 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.8644798458386862 94 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.8611404223667847 91 Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.8609197907134101 84 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.8597031619576616 93 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.8594446623775133 70 Cpa|evm.model.tig00000889.39 tig00000889_g5332.t1 0.8582171888656287 63 Cpa|evm.model.tig00000553.12 tig00000553_g2082.t1 0.8579080189312602 84 Cpa|evm.model.tig00000478.28 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00000478_g1276.t1 0.8570340917343335 65 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.8569837883748839 93 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.8567304901963798 77 Cpa|evm.model.tig00020684.6 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase tig00020684_g12854.t1 0.8552834160935836 69 Cpa|evm.model.tig00001128.6 tig00001128_g7172.t1 0.8552719044813677 70 Cpa|evm.model.tig00000076.165 tig00000076_g2456.t1 0.855044992938395 71 Cpa|evm.model.tig00000361.74 tig00000361_g24426.t1 0.8543336548605254 73 Cpa|evm.model.tig00000361.1 tig00000361_g24355.t1 0.8533149437259415 75 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.8529728395957362 88 Cpa|evm.model.tig00020952.7 ABC transporter B family member 2 OS=Arabidopsis thaliana tig00020952_g16473.t1 0.8500270640739237 80 Cpa|evm.model.tig00020629.149 tig00020629_g12480.t1 0.8460698587038449 87 Cpa|evm.model.tig00000981.5 tig00000981_g5860.t1 0.8453938469626003 89 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor tig00020943_g16313.t1 0.8447567983807865 90 Cpa|evm.model.tig00000981.19 tig00000981_g5873.t1 0.8441947923804904 92 Cpa|evm.model.tig00000475.6 tig00000475_g1230.t1 0.8437905982905127 93 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.8430063628429656 95 Cpa|evm.model.tig00000391.2 DNA damage response.DNA repair mechanisms.photoreactivation.6-4-type photolyase (UVR3) tig00000391_g24833.t1 0.8415521458069046 96 Cpa|evm.model.tig00001729.6 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter tig00001729_g9740.t1 0.8412497804573871 97 Cpa|evm.model.tig00020952.42 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16499.t1 0.8411762927534657 98 Cpa|evm.model.tig00000459.97 tig00000459_g1161.t1 0.8406142902754979 100