Sequence Description Alias PCC hrr Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.9616923920202045 1 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana tig00001003_g6291.t1 0.9481307949712187 2 Cpa|evm.model.tig00020554.145 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana tig00020554_g10922.t1 0.9413034214788027 3 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor tig00020903_g15115.t1 0.9391981325188655 4 Cpa|evm.model.tig00021357.6 tig00021357_g20739.t1 0.9298664111216296 5 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor tig00000789_g4132.t1 0.9288186140594206 6 Cpa|evm.model.tig00020554.42 tig00020554_g10824.t1 0.9283953773147955 7 Cpa|evm.model.tig00000615.67 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Sof1 assembly factor tig00000615_g2597.t1 0.9265802446072716 8 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00021357_g20757.t1 0.9150426222849082 9 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.912254333895459 10 Cpa|evm.model.tig00000789.38 tig00000789_g4132.t1 0.9067533008224365 11 Cpa|evm.model.tig00000615.61 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor tig00000615_g2590.t1 0.8997704652328884 12 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.8995792633639608 13 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana tig00000704_g3322.t1 0.8968039711472541 30 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8964334445323769 42 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.8942673808956921 47 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component tig00021319_g20258.t1 0.8907616955044442 81 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.8877662432025446 61 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.8861709559011197 32 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8858265415749589 43 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.8843927397473567 84 Cpa|evm.model.tig00001003.41 tig00001003_g6295.t1 0.8835334608959131 30 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein tig00000829_g4658.t1 0.8819265866381378 23 Cpa|evm.model.tig00000944.38 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor tig00000944_g5960.t1 0.8819019322632307 24 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase tig00001049_g6659.t1 0.8799964321319698 47 Cpa|evm.model.tig00000076.89 Periodic tryptophan protein 2 OS=Arabidopsis thaliana tig00000076_g2387.t1 0.8787807465700185 26 Cpa|evm.model.tig00020538.70 tig00020538_g10376.t1 0.8777290665433789 27 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.8773531829293957 38 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana tig00000912_g5433.t1 0.8770507144356416 93 Cpa|evm.model.tig00001372.8 0.8737026137243893 43 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.873233357020725 87 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.8722420903607283 80 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component tig00021348_g20598.t1 0.8712282598567471 37 Cpa|evm.model.tig00021357.26 tig00021357_g20756.t1 0.8704754178956622 79 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana tig00020544_g10489.t1 0.8687996867513909 38 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component tig00021589_g22732.t1 0.8687158733359476 80 Cpa|evm.model.tig00021464.48 tig00021464_g21752.t1 0.8686969429327582 38 Cpa|evm.model.tig00000194.42 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG2 regulatory GTPase tig00000194_g14770.t1 0.867586613081882 39 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.867079437311395 78 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.865401043323672 94 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.8649025725213799 42 Cpa|evm.model.tig00000241.31 tig00000241_g20889.t1 0.8648162848968175 43 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.863381012177957 63 Cpa|evm.model.tig00001234.12 tig00001234_g7735.t1 0.8629428079713571 46 Cpa|evm.model.tig00020554.12 tig00020554_g10798.t1 0.862254520180712 47 Cpa|evm.model.tig00000403.66 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 11 tig00000403_g325.t1 0.8615680065365035 48 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component tig00021352_g20713.t1 0.8608409627368017 49 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides tig00020531_g10062.t1 0.8605268789738919 75 Cpa|evm.model.tig00000704.62 tig00000704_g3346.t2 0.8602417473413845 51 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.8599715757741828 79 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase tig00000203_g17139.t1 0.859572407888859 68 Cpa|evm.model.tig00000194.23 tig00000194_g14751.t1 0.859537302440906 95 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 tig00021589_g22717.t1 0.858377194370833 57 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.8581715911943998 83 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.8566997351754355 97 Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 0.8554554801768851 91 Cpa|evm.model.tig00022075.25 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase tig00022075_g23589.t1 0.8547129158360082 63 Cpa|evm.model.tig00000076.104 tig00000076_g2402.t1 0.8525506487603143 65 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.8524222100629242 88 Cpa|evm.model.tig00000404.29 tig00000404_g392.t1 0.8492530439544266 68 Cpa|evm.model.tig00000381.6 tig00000381_g24530.t1 0.8473503135392249 71 Cpa|evm.model.tig00000037.36 tig00000037_g10104.t1 0.8471663469377609 95 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component tig00020538_g10321.t1 0.8471528179491233 90 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component tig00000037_g10102.t1 0.8443466459885209 82 Cpa|evm.model.tig00001073.13 tig00001073_g6821.t1 0.8412247997986005 79 Cpa|evm.model.tig00021350.40 tig00021350_g20656.t1 0.8409611828848182 86 Cpa|evm.model.tig00000194.28 N-alpha-acetyltransferase MAK3 OS=Arabidopsis thaliana tig00000194_g14754.t1 0.8403778210350119 81 Cpa|evm.model.tig00021352.66 tig00021352_g20733.t1 0.8348467309134336 87 Cpa|evm.model.tig00000980.6 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00000980_g6131.t1 0.8344665537017621 88 Cpa|evm.model.tig00021123.29 tig00021123_g18513.t1 0.8340115484341504 89 Cpa|evm.model.tig00021612.48 tig00021612_g22889.t1 0.833935641727896 90 Cpa|evm.model.tig00001003.42 0.8338171871560122 91 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor tig00000704_g3350.t1 0.8335713374074992 92 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3326.t1 0.8335316445190796 94 Cpa|evm.model.tig00020553.162 N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana tig00020553_g10654.t1 0.8329964584741516 94 Cpa|evm.model.tig00001093.3 tig00001093_g6878.t1 0.8325709638554278 96 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin tig00000789_g4137.t1 0.8322410718259292 97