Sequence Description Alias PCC hrr Cpa|evm.model.tig00020538.32 tig00020538_g10336.t1 0.9578644974147904 1 Cpa|evm.model.tig00000851.2 tig00000851_g4886.t1 0.951645008120426 5 Cpa|evm.model.tig00020830.48 tig00020830_g14432.t1 0.9508958950933519 6 Cpa|evm.model.tig00020830.32 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.cpTatC component tig00020830_g14413.t1 0.9497703461473588 4 Cpa|evm.model.tig00001424.9 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase tig00001424_g8708.t1 0.9486073735370248 7 Cpa|evm.model.tig00000792.24 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein tig00000792_g4173.t1 0.9437953582832084 6 Cpa|evm.model.tig00000718.34 tig00000718_g3709.t1 0.9401725739513987 7 Cpa|evm.model.tig00020610.25 Putative methyltransferase At1g22800, mitochondrial OS=Arabidopsis thaliana tig00020610_g11963.t1 0.9363230161494374 8 Cpa|evm.model.tig00000204.28 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana tig00000204_g17696.t1 0.934979927085824 9 Cpa|evm.model.tig00021037.8 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase tig00021037_g17413.t1 0.9309861816778706 10 Cpa|evm.model.tig00021612.59 Solute transport.carrier-mediated transport.MC-type solute transporter tig00021612_g22900.t1 0.9303907883064128 11 Cpa|evm.model.tig00001071.12 tig00001071_g6803.t1 0.928164971967683 12 Cpa|evm.model.tig00020614.46 ABC transporter A family member 4 OS=Arabidopsis thaliana tig00020614_g12159.t1 0.9265864278009792 13 Cpa|evm.model.tig00000178.29 Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase tig00000178_g12738.t1 0.9228032696072767 14 Cpa|evm.model.tig00021036.19 Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana tig00021036_g17290.t1 0.9205137237675295 15 Cpa|evm.model.tig00001154.27 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase tig00001154_g7291.t1 0.9171053352645192 16 Cpa|evm.model.tig00022099.6 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component tig00022099_g23808.t1 0.9168067895149811 17 Cpa|evm.model.tig00021038.91 tig00021038_g17580.t1 0.9152970017134472 18 Cpa|evm.model.tig00020572.24 Lipid metabolism.glycerolipid synthesis.cardiolipin.cardiolipin synthase tig00020572_g11544.t1 0.914014561460428 19 Cpa|evm.model.tig00000430.3 tig00000430_g586.t1 0.9111524473796181 20 Cpa|evm.model.tig00000849.28 tig00000849_g4768.t1 0.9106034037504033 21 Cpa|evm.model.tig00000101.3 tig00000101_g4441.t1 0.9103767610344243 22 Cpa|evm.model.tig00001229.8 tig00001229_g7840.t1 0.9093393187253044 23 Cpa|evm.model.tig00021435.31 tig00021435_g21408.t1 0.9050461794388541 24 Cpa|evm.model.tig00021720.14 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease tig00021720_g23184.t1 0.9027646584840132 25 Cpa|evm.model.tig00020592.44 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020592_g11677.t1 0.9026959977005339 26 Cpa|evm.model.tig00020553.195 tig00020553_g10685.t1 0.8969084053843184 27 Cpa|evm.model.tig00020941.46 tig00020941_g16238.t1 0.895057183291128 28 Cpa|evm.model.tig00021038.40 tig00020904_g15157.t1 0.8929584021154743 29 Cpa|evm.model.tig00000093.199 tig00000093_g3623.t1 0.8924486535575794 30 Cpa|evm.model.tig00000605.31 tig00000605_g2497.t1 0.8904061037310828 31 Cpa|evm.model.tig00000403.95 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 99.4) & Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana tig00000403_g355.t1 0.8901921092574454 32 Cpa|evm.model.tig00000870.34 NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum tig00000870_g5150.t1 0.8884610476169456 33 Cpa|evm.model.tig00021070.8 tig00021070_g17818.t1 0.8884557114093435 34 Cpa|evm.model.tig00000241.142 Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum tig00000241_g21007.t1 0.8883501137728249 35 Cpa|evm.model.tig00000944.16 RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana tig00000944_g5937.t1 0.8872147687764818 36 Cpa|evm.model.tig00001030.22 Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum tig00001030_g6462.t1 0.887005964513342 37 Cpa|evm.model.tig00020904.24 tig00020904_g15157.t1 0.8849399638390522 38 Cpa|evm.model.tig00021332.11 tig00021332_g20327.t1 0.8839185992164208 39 Cpa|evm.model.tig00000076.15 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type) tig00000076_g2315.t1 0.8834181727996212 40 Cpa|evm.model.tig00000658.25 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum tig00000658_g2915.t1 0.8833631539193141 41 Cpa|evm.model.tig00021127.122 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic OS=Arabidopsis thaliana tig00021127_g18802.t1 0.8813954620251129 42 Cpa|evm.model.tig00020848.14 tig00020848_g14540.t1 0.880789310416023 43 Cpa|evm.model.tig00000865.16 tig00000865_g5070.t1 0.8785546798264448 44 Cpa|evm.model.tig00000157.104 tig00000157_g9702.t1 0.8784292286941332 45 Cpa|evm.model.tig00020610.107 tig00020610_g12053.t1 0.877750427051467 46 Cpa|evm.model.tig00000133.48 tig00000133_g7712.t1 0.8761622913860132 47 Cpa|evm.model.tig00000093.153 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2, chloroplastic OS=Chlamydomonas reinhardtii tig00000093_g3581.t1 0.8757769642941778 48 Cpa|evm.model.tig00020684.63 tig00020684_g12914.t1 0.8751287303357431 49 Cpa|evm.model.tig00000655.56 tig00000655_g2885.t1 0.874697873571429 50 Cpa|evm.model.tig00020515.11 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.TerC protein tig00020515_g9779.t1 0.8746255986978271 51 Cpa|evm.model.tig00000718.36 tig00000718_g3711.t1 0.8729203989165945 52 Cpa|evm.model.tig00020830.64 Cellular respiration.oxidative phosphorylation.alternative NAD(P)H dehydrogenase activities.type-II NAD(P)H dehydrogenase activities.NDB-type NAD(P)H dehydrogenase tig00020830_g14447.t1 0.8705548756582087 53 Cpa|evm.model.tig00020825.7 tig00020825_g14288.t1 0.8700593728479432 54 Cpa|evm.model.tig00021179.40 Carotenoid cleavage dioxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica tig00021179_g19254.t1 0.8682638703869354 74 Cpa|evm.model.tig00020614.38 tig00020614_g12151.t1 0.8680043703969264 56 Cpa|evm.model.tig00021435.37 tig00021435_g21416.t1 0.8677362369873198 57 Cpa|evm.model.tig00000459.55 AAA-ATPase At3g28600 OS=Arabidopsis thaliana tig00000459_g1119.t1 0.8660090297328769 58 Cpa|evm.model.tig00021181.14 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease tig00021181_g19317.t1 0.8654630024992226 59 Cpa|evm.model.tig00021318.33 tig00021318_g20151.t1 0.8646394229659318 69 Cpa|evm.model.tig00020675.17 tig00020675_g12598.t1 0.8644906772510959 61 Cpa|evm.model.tig00000430.41 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) tig00000430_g628.t1 0.8643160724638014 62 Cpa|evm.model.tig00021318.25 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor tig00021318_g20145.t1 0.8621423745334059 63 Cpa|evm.model.tig00000900.28 tig00000900_g5384.t1 0.858625559700855 64 Cpa|evm.model.tig00000718.3 ABC transporter C family member 6 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.85820755314952 65 Cpa|evm.model.tig00000219.42 tig00000219_g19481.t1 0.8580392272386015 66 Cpa|evm.model.tig00000655.31 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana tig00000655_g2857.t1 0.8578941661075457 67 Cpa|evm.model.tig00000093.128 tig00000093_g3556.t1 0.857470425415548 85 Cpa|evm.model.tig00000821.52 tig00000821_g4512.t1 0.8560035868096233 69 Cpa|evm.model.tig00000911.8 tig00000911_g5403.t1 0.8557084894377625 70 Cpa|evm.model.tig00021348.87 Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana tig00021348_g20595.t1 0.8556723331827543 71 Cpa|evm.model.tig00001333.21 tig00001333_g8191.t1 0.8550786391313798 72 Cpa|evm.model.tig00000792.58 tig00000792_g4209.t1 0.8534029268759019 73 Cpa|evm.model.tig00000158.61 tig00000158_g10165.t1 0.8533645483022063 74 Cpa|evm.model.tig00021073.1 0.8529735024119222 75 Cpa|evm.model.tig00000808.24 tig00000808_g4413.t1 0.8524777342705165 76 Cpa|evm.model.tig00001299.9 tig00001299_g8068.t1 0.8520986903231044 77 Cpa|evm.model.tig00020943.5 tig00020943_g16247.t1 0.8508908912711585 78 Cpa|evm.model.tig00021319.42 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase tig00021319_g20236.t1 0.8500775837757618 79 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca tig00000863_g5002.t1 0.8499381132333312 85 Cpa|evm.model.tig00000881.22 tig00000881_g5235.t1 0.8498812892271227 81 Cpa|evm.model.tig00000093.96 tig00000093_g3523.t1 0.8491815396015033 82 Cpa|evm.model.tig00020539.38 tig00020539_g10429.t1 0.8487957725649397 83 Cpa|evm.model.tig00020952.49 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component tig00020952_g16507.t1 0.8486456033982663 84 Cpa|evm.model.tig00000403.33 tig00000403_g289.t1 0.8480847893419524 85 Cpa|evm.model.tig00021127.40 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor tig00021127_g18717.t1 0.8471891199985112 86 Cpa|evm.model.tig00001073.8 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.omega-3/omega-6 fatty acid desaturase tig00001073_g6817.t1 0.8470098156149288 87 Cpa|evm.model.tig00000144.111 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease tig00000144_g9105.t1 0.8463685843592875 88 Cpa|evm.model.tig00021012.32 0.8462908899431018 89 Cpa|evm.model.tig00001501.2 tig00001501_g9218.t1 0.8455640013982063 90 Cpa|evm.model.tig00021073.31 tig00021073_g18036.t1 0.8454425692454953 91 Cpa|evm.model.tig00020610.123 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma tig00020610_g12068.t1 0.8433445591424283 93 Cpa|evm.model.tig00000718.2 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8428803260235671 99 Cpa|evm.model.tig00000857.23 tig00000857_g4949.t1 0.8420942833855634 95 Cpa|evm.model.tig00021012.7 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 42.4) tig00021012_g16986.t1 0.8418310447577717 96 Cpa|evm.model.tig00000498.40 Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00000498_g1616.t1 0.8416088211467617 97 Cpa|evm.model.tig00021357.52 tig00021357_g20777.t1 0.8412931025201611 98 Cpa|evm.model.tig00000828.19 Probable sulfate transporter 4.2 OS=Arabidopsis thaliana tig00000828_g4620.t1 0.8406210343410689 100