Sequence Description Alias PCC hrr Cre16.g681900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 30777143, SCY1 0.896083279257 4 Cre08.g369000 30773590 0.890442955037 2 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 30791982, PPS2 0.872159516756 26 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 30775504 0.870916168812 18 Cre06.g303700 30779468 0.864061988073 39 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 30774423, PSBP6 0.861585970527 34 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 30783185, FTSY 0.860869720309 21 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II 30775292, KAS2 0.858474994934 20 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 30778727, CHLG 0.85509321663 44 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785008, UPD2 0.852192846242 52 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30791685, CHLI2 0.851467859 53 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30778583, CHLI1 0.851152507485 39 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 30777054 0.847687690552 39 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 30778701 0.847654209668 14 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 30792635, CGL71 0.843440970672 58 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30782338, ANK29 0.842845084459 31 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785831, UPD3 0.842212734355 52 Cre03.g145207 30787333, CPLD33 0.841609012522 37 Cre02.g093450 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase(50.4.1 : 437.0) & Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana 30786142, FBA2 0.841274572323 26 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 30787650 0.839769572811 47 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 30785467 0.8393895309 36 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 30793256 0.838927236137 41 Cre09.g398289 1-acyl-sn-glycerol-3-phosphate acyltransferase CHLREDRAFT_174358 OS=Chlamydomonas reinhardtii 30781171 0.838063570806 23 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 30784921, CPX2 0.836953858303 24 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 30786587, GSA1 0.835669387768 38 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 30783498, CHLD 0.835608224117 58 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 30775172 0.835417084613 42 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 30777907, CMS1 0.834951235921 55 Cre09.g389393 30780814 0.834348848664 29 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 30790156 0.830767319696 40 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 30788009 0.829138811001 31 Cre10.g457650 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component 30790208 0.828036934701 33 Cre03.g171100 30787901 0.825916937903 33 Cre13.g576760 30784132 0.825761735876 44 Cre17.g732250 30782090 0.822619441226 35 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 30777960, RMT1 0.82229109373 45 Cre10.g439400 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 30790410, GAT1 0.822187536599 63 Cre08.g377150 30773438 0.820901773317 38 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 30783049 0.818064204261 66 Cre03.g195650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS10 component 30787464, PRPS10 0.817013297935 42 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 30790814 0.816927207497 41 Cre12.g524500 30793297, RMT2 0.815099881596 42 Cre08.g375550 30773638 0.813862681791 43 Cre01.g042800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 30789170, DVR1 0.813278141261 62 Cre16.g659850 30777680, CGL37 0.812515286666 73 Cre13.g577850 30784131 0.812170493031 46 Cre12.g494750 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS20 component 30791934, PRPS20 0.811258549085 47 Cre03.g155200 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.chorismate mutase 30788064, CHM1 0.811067019781 48 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 30783214, GUN4 0.810717089421 49 Cre07.g344350 Protein modification.peptide maturation.plastid.PLSP/TPP plastidic signal peptidase 30774727, TPP1 0.810689674848 50 Cre08.g371650 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Hcf106 component 30773883, TAT2 0.808838369886 51 Cre10.g454250 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 30790083 0.807025783933 52 Cre16.g651923 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CrtISO carotenoid isomerase 30776797 0.806534789195 53 Cre08.g380201 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase 30773877 0.805147106102 92 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 30787325 0.804307559231 55 Cre04.g213100 30791212, CGLD7 0.803846628764 56 Cre04.g231026 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component 30791302, SRP43 0.803782909535 57 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 30775099, FDX4 0.803301318972 58 Cre06.g300700 30779548 0.802287954252 66 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 30787386, DLA2 0.801442028303 61 Cre12.g554103 30792913, CGL74 0.801306498899 75 Cre03.g209841 30787009 0.800519269443 62 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 30773407, PSBP4 0.796918894807 63 Cre10.g429150 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.anthranilate phosphoribosyltransferase 30790910, PRT1 0.796390727926 82 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 30776945 0.796323596349 68 Cre03.g172000 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP reductase 30786866 0.794939694941 66 Cre08.g373100 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid epsilon ring hydroxylase 30773572 0.794099242117 67 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 30789075 0.793597427275 72 Cre06.g264300 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS15 component 30780052, PRPS15 0.792951703684 69 Cre02.g097550 Probable transcriptional regulatory protein At2g25830 OS=Arabidopsis thaliana 30785070 0.792592495744 70 Cre03.g196350 30788070 0.791971077448 71 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) 30790817, PRX6 0.791684512815 72 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 30791717 0.791565953873 73 Cre13.g575000 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component 30783948, CCS1 0.791562829838 74 Cre13.g581650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component 30784593, PRPL7 0.79136097851 75 Cre01.g010848 30789480 0.791101291921 76 Cre48.g761197 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL3 component 30778371 0.791042931978 77 Cre01.g010864 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 30788710 0.790815357523 83 Cre09.g406200 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase 30780926 0.789551053753 83 Cre06.g280650 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.Y3IP1 protein 30780166, CGL59 0.789418664336 80 Cre03.g145747 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.chorismate synthase 30787154, SHK7 0.78839059507 89 Cre01.g047800 Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana 30788895, GRX6 0.787042072673 82 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 30789577, POR1 0.786937541511 83 Cre06.g295250 Lipid phosphate phosphatase epsilon 2, chloroplastic OS=Arabidopsis thaliana 30779541 0.786658317204 84 Cre14.g629650 Solute transport.carrier-mediated transport.TOC superfamily.NiCoT transport protein 30776558, NIK1 0.786127244319 91 Cre12.g546050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXR 1-deoxy-D-xylulose 5-phosphate reductase 30793428, DXR1 0.78604443311 86 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 30780063, ALB3 0.785682444786 87 Cre02.g108850 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL17 component 30784955, PRPL17 0.785637996906 88 Cre02.g095128 30785057 0.785243870269 89 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30776050, UPD1 0.784865234976 90 Cre13.g579550 30784747, CGL27 0.784672987853 91 Cre03.g194200 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E1 pyruvate dehydrogenase component.beta subunit 30787000, PDH2 0.784557031928 92 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 30789622 0.78347521296 93 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase 30790114, ADK2 0.783223565417 94 Cre13.g564050 30784355 0.782673051569 95 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 30787765, RPI1 0.782261320316 96 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 30786848, TEF10a 0.780180385111 97 Cre12.g519000 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.phosphoribosyanthranilate isomerase 30791913 0.779019497111 98 Cre09.g393173 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30780340, ELI2 0.778659347144 100