Sequence Description Alias PCC hrr Cre01.g051100 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component 30788938 0.937283175323 1 Cre12.g484150 30792688 0.930252988639 2 Cre14.g621000 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component 30776341 0.929801584297 3 Cre10.g430850 30790823 0.927403532548 5 Cre12.g514450 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component 30793601 0.924827848155 5 Cre06.g307450 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A1 component 30779768, SPL1 0.923389942512 6 Cre14.g633650 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF6/PRP1/STA1 protein component 30776534, PRP6 0.923272399544 7 Cre05.g234850 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 30783430 0.922954655536 8 Cre03.g189605 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP6/CTR9 component 30787371 0.922343017844 9 Cre03.g174500 Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 30788186 0.920413763704 17 Cre17.g745547 30782778 0.918034401815 15 Cre02.g142700 30786037 0.916311747326 20 Cre09.g400664 30780275 0.915335613956 13 Cre03.g190550 30787319 0.915041158363 15 Cre11.g481900 30776009 0.911625449692 15 Cre12.g508250 30791980 0.910343856143 16 Cre02.g087200 30785024 0.910232158589 17 Cre04.g220600 30790993 0.908866175702 18 Cre10.g445900 30790251 0.908091540522 19 Cre12.g526950 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF5 component 30792530 0.906885942759 38 Cre07.g325713 RNA processing.RNA splicing.spliceosome assembly/disassembly.STIPL disassembly factor 30775336 0.905448182544 21 Cre11.g467712 30776077 0.90437751373 22 Cre12.g506650 30792505 0.904181406049 46 Cre07.g349100 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase 30774605 0.90352533794 24 Cre04.g222300 30791299 0.90332211708 25 Cre06.g309050 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 30778680, NOT2 0.902809730734 26 Cre06.g292650 30780127 0.90209107716 27 Cre09.g386731 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor 30780511 0.901327219151 28 Cre16.g662800 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF4 snRNP component 30776802, PRP4 0.901104284647 29 Cre10.g443350 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.Syndetin-like EARP-specific component 30790503 0.900830383828 30 Cre16.g676400 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase 30777761 0.899412978743 31 Cre08.g372800 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B3 component 30773886 0.898555088639 32 Cre17.g744147 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase 30781910 0.897632338244 33 Cre11.g467639 30775727 0.897307967686 34 Cre04.g217750 30791183 0.896946110043 35 Cre12.g487600 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component 30793142, CPS2 0.896711485809 43 Cre12.g524100 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 30793624 0.895338607237 37 Cre05.g232950 30783123 0.894873067555 38 Cre12.g499750 30793061 0.894537568389 39 Cre14.g618860 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component 30776654 0.893931740404 92 Cre07.g351000 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein 30774649, WWP1 0.893438557683 41 Cre07.g318651 Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. japonica 30775077 0.89203038993 42 Cre06.g300750 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component 30778538 0.891381073702 43 Cre16.g686650 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM ligase E3 protein 30776898 0.889583610958 44 Cre14.g633100 30776136 0.888406696298 45 Cre06.g278203 30779214 0.887999751413 46 Cre03.g199750 30788302 0.887815891479 47 Cre12.g494000 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.TRAF1 ATG6-stability regulator protein 30793232, CGL82 0.887781717352 48 Cre06.g268450 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1c/MSI component 30779513 0.88483732918 49 Cre12.g494100 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component 30793549 0.884667056751 50 Cre02.g092500 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein 30785207, UPF1 0.884666299706 51 Cre06.g297300 30778675 0.884170471987 52 Cre07.g340100 30774965, MOT13 0.882711710073 54 Cre06.g303171 30779012 0.882523394984 55 Cre02.g146200 30785908 0.881754869381 56 Cre14.g628800 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.1 protease 30776349 0.881718658708 75 Cre12.g486550 30792258 0.881282324904 58 Cre06.g283634 30779606 0.881234877611 59 Cre01.g040250 30789567, DNJ9 0.881110485352 60 Cre06.g270600 30779270 0.880974948652 61 Cre13.g575600 30783956 0.879811655077 62 Cre08.g377200 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana 30773522 0.879522106415 64 Cre17.g743947 30782019 0.879283647946 81 Cre13.g605050 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.MMS19 component 30784478 0.879088976464 66 Cre07.g348900 30774789, DNJ19 0.878807017051 67 Cre01.g003450 30789254 0.878212916689 79 Cre03.g176400 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 112.2) & Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana 30787136 0.878157192533 69 Cre03.g193200 30786853 0.877943491845 70 Cre09.g396326 30781078 0.87710862441 71 Cre07.g313050 30774505 0.876466292539 72 Cre11.g467751 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase 30775961 0.876174864023 73 Cre06.g291850 30779806 0.875466652013 74 Cre08.g382590 Actin-related protein 6 OS=Oryza sativa subsp. indica 30773758 0.875109081764 75 Cre15.g638950 30783561 0.875012069802 89 Cre01.g053360 30788585 0.875002911259 77 Cre08.g384950 30773698 0.872878279471 80 Cre09.g398650 Cactin OS=Arabidopsis thaliana 30780362 0.872857027413 81 Cre12.g520250 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component 30793402 0.871683358064 82 Cre12.g507700 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 30791679 0.871156277945 83 Cre12.g493000 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) 30793597 0.870734747196 84 Cre13.g604600 30784677 0.87061286222 85 Cre10.g441000 Protein IWS1 homolog 1 OS=Arabidopsis thaliana 30790298 0.870399948091 86 Cre07.g336750 30775286 0.87023382853 87 Cre07.g347250 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.FIP37 regulatory component 30775195, FIP37 0.869946035957 88 Cre17.g697334 30782179 0.869440111631 89 Cre16.g662852 30777781 0.869298599707 90 Cre03.g204752 RNA processing.RNA 5-end cap adding.mRNA cap methyltransferase 30786990 0.868899442618 91 Cre03.g176651 30788101 0.868646633027 92 Cre09.g413650 30780449 0.868518433349 93 Cre09.g394880 30781263 0.868291251535 95 Cre16.g670300 30778243, PRP39 0.86741411922 96 Cre16.g680650 30777398 0.867161515668 97 Cre04.g221650 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit A 30791225 0.866608485586 98 Cre12.g506050 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF77/Rna14 component 30792895 0.865628351084 100