Sequence Description Alias PCC hrr Cpa|evm.model.tig00020961.104 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component tig00020961_g16723.t1 0.9351409372478979 1 Cpa|evm.model.tig00001604.1 tig00001604_g9403.t1 0.927550358517872 2 Cpa|evm.model.tig00001127.32 Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial OS=Arabidopsis thaliana tig00001127_g7165.t1 0.9270531536961588 3 Cpa|evm.model.tig00020537.19 Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum tig00020537_g10241.t1 0.9173229553704408 4 Cpa|evm.model.tig00020912.31 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component tig00020912_g15804.t1 0.9018188129617117 8 Cpa|evm.model.tig00000017.6 tig00000017_g6.t1 0.888684759630514 6 Cpa|evm.model.tig00020912.24 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana tig00020912_g15798.t1 0.88702251816965 7 Cpa|evm.model.tig00000826.15 tig00000826_g4580.t1 0.8749430050393039 11 Cpa|evm.model.tig00021127.110 Cellular respiration.tricarboxylic acid cycle.citrate synthase tig00021127_g18791.t1 0.8707918628376927 9 Cpa|evm.model.tig00000025.47 tig00000025_g7952.t1 0.8694249588578354 24 Cpa|evm.model.tig00000093.89 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana tig00000093_g3516.t1 0.860652808526809 26 Cpa|evm.model.tig00001127.9 Lipid metabolism.glycerolipid synthesis.phosphatidylcholine.methylation pathway.N-methylphospholipid methyltransferase tig00001127_g7138.t1 0.8594478987565707 15 Cpa|evm.model.tig00001155.1 tig00001155_g7309.t1 0.8579158315183032 17 Cpa|evm.model.tig00000471.15 Lipid metabolism.glycerolipid synthesis.phosphatidylcholine.acyl-CoA:lysophosphatidylcholine acyltransferase tig00000471_g1190.t1 0.853946503645778 27 Cpa|evm.model.tig00021742.6 tig00021742_g23316.t1 0.8506060639920966 26 Cpa|evm.model.tig00000658.12 Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana tig00000658_g2905.t1 0.8463332862711873 18 Cpa|evm.model.tig00000806.53 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component tig00000806_g4383.t1 0.8449579788311606 46 Cpa|evm.model.tig00000383.31 Solute transport.carrier-mediated transport.MC-type solute transporter tig00000383_g24641.t1 0.8438064508211421 18 Cpa|evm.model.tig00021489.6 tig00021489_g21653.t1 0.8403170735228112 29 Cpa|evm.model.tig00021127.189 Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana tig00021127_g18874.t1 0.8389226481473316 20 Cpa|evm.model.tig00000215.125 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase acting on acid anhydride(50.3.6 : 92.8) tig00000215_g18669.t2 0.837209440341245 48 Cpa|evm.model.tig00000857.30 tig00000857_g4957.t1 0.8316482825415209 69 Cpa|evm.model.tig00020616.37 tig00020616_g12273.t1 0.8315011756138451 42 Cpa|evm.model.tig00021127.109 Citrate synthase, mitochondrial OS=Daucus carota tig00021127_g18791.t1 0.830593470045676 24 Cpa|evm.model.tig00020904.57 Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond(50.6.1 : 992.0) & Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana tig00020904_g15189.t1 0.8296878451590854 53 Cpa|evm.model.tig00000821.9 Very-long-chain 3-oxoacyl-CoA reductase 1 OS=Arabidopsis thaliana tig00000821_g4468.t1 0.8293606690619664 26 Cpa|evm.model.tig00000157.33 Lipid metabolism.glycerolipid synthesis.phosphatidylcholine.acyl-CoA:lysophosphatidylcholine acyltransferase tig00000157_g9623.t1 0.8291387655546261 29 Cpa|evm.model.tig00001038.6 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.acetyl-CoA synthetase tig00001038_g6518.t1 0.8289378117948276 28 Cpa|evm.model.tig00020710.46 tig00020710_g13281.t1 0.8282617415292377 49 Cpa|evm.model.tig00000402.17 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase(50.2.3 : 229.1) & Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana tig00000402_g194.t1 0.8282518207194554 45 Cpa|evm.model.tig00001304.8 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor tig00001304_g8110.t1 0.8256254321460796 33 Cpa|evm.model.tig00000571.4 High-affinity nitrate transporter 2.3 OS=Oryza sativa subsp. japonica tig00000571_g2155.t1 0.8243661356377074 77 Cpa|evm.model.tig00020830.3 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component tig00020830_g14385.t1 0.8236541207910981 51 Cpa|evm.model.tig00001177.16 Nutrient uptake.nitrogen assimilation.nitrate uptake system.NRT2 nitrate transporter tig00001177_g7371.t1 0.8225543459429999 34 Cpa|evm.model.tig00000769.14 Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea tig00000769_g4008.t1 0.822129621078272 35 Cpa|evm.model.tig00020610.127 tig00020610_g12072.t1 0.8220453642359438 36 Cpa|evm.model.tig00000826.16 tig00000826_g4581.t1 0.8214422997648663 37 Cpa|evm.model.tig00021094.37 tig00021094_g18119.t1 0.8211923455085566 38 Cpa|evm.model.tig00001030.12 tig00001030_g6453.t1 0.8181199970160732 39 Cpa|evm.model.tig00020830.34 tig00020830_g14415.t1 0.8174610119488787 68 Cpa|evm.model.tig00000711.67 Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana tig00000711_g3429.t1 0.8161488292827683 41 Cpa|evm.model.tig00021682.4 tig00021682_g23093.t1 0.8145844130924873 69 Cpa|evm.model.tig00000147.14 Coenzyme metabolism.tetrahydrofolate synthesis.pterin synthesis.GTP-cyclohydrolase I tig00000147_g9451.t1 0.8119372573043253 78 Cpa|evm.model.tig00000350.17 Enzyme classification.EC_6 ligases.EC_6.3 ligase forming carbon-nitrogen bond(50.6.3 : 1633.8) & Acetyl-CoA carboxylase 2 OS=Arabidopsis thaliana tig00000350_g24318.t1 0.8114708742992904 44 Cpa|evm.model.tig00020912.30 tig00020912_g15803.t1 0.8077808068222638 45 Cpa|evm.model.tig00000498.20 tig00000498_g1597.t1 0.8073444244461137 46 Cpa|evm.model.tig00000042.242 tig00000042_g15644.t1 0.806903037257642 47 Cpa|evm.model.tig00021070.120 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 197.8) & Triosephosphate isomerase, cytosolic OS=Hordeum vulgare tig00021070_g17938.t1 0.8031562984641202 51 Cpa|evm.model.tig00000711.7 Protein biosynthesis.aminoacyl-tRNA synthetase activities.arginine-tRNA ligase tig00000711_g3368.t1 0.8030719037532806 49 Cpa|evm.model.tig00000551.5 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase tig00000551_g2026.t1 0.8005688834885125 66 Cpa|evm.model.tig00000135.5 Probable protein S-acyltransferase 16 OS=Arabidopsis thaliana tig00000135_g7971.t1 0.7993386551899222 51 Cpa|evm.model.tig00000269.110 Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana tig00000269_g23772.t1 0.7992748167549938 53 Cpa|evm.model.tig00020816.66 tig00020816_g14154.t1 0.7984410810539153 53 Cpa|evm.model.tig00020562.40 Probable transcriptional regulatory protein At2g25830 OS=Arabidopsis thaliana tig00020562_g11165.t1 0.7976704002988445 54 Cpa|evm.model.tig00021517.10 Protein biosynthesis.translation termination.ribosome recycling factor (RLI/ABCE) tig00021517_g21995.t1 0.7968941971742424 95 Cpa|evm.model.tig00000241.13 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component tig00000241_g20872.t1 0.794584592393147 56 Cpa|evm.model.tig00000471.12 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase tig00000471_g1187.t1 0.7928454078285367 57 Cpa|evm.model.tig00000605.13 Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica tig00000605_g2480.t1 0.7914970432346962 59 Cpa|evm.model.tig00000430.54 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.anthranilate synthase complex.alpha subunit tig00000430_g644.t1 0.7875019069055307 62 Cpa|evm.model.tig00000737.36 tig00000737_g3814.t2 0.7864409773303317 80 Cpa|evm.model.tig00000411.66 tig00000411_g573.t1 0.785916361401277 78 Cpa|evm.model.tig00022075.67 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase tig00022075_g23630.t1 0.7854771083017699 83 Cpa|evm.model.tig00020904.13 tig00020904_g15146.t1 0.785108475389838 66 Cpa|evm.model.tig00020554.34 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.bifunctional homoserine dehydrogenase and aspartate kinase tig00020554_g10819.t1 0.7850855675490408 67 Cpa|evm.model.tig00020660.28 tig00020660_g12525.t1 0.7847527925671249 96 Cpa|evm.model.tig00020553.251 Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana tig00020553_g10740.t1 0.7846289430408774 69 Cpa|evm.model.tig00021246.6 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.manganese cation transporter (Mn-CDF-type) tig00021246_g19606.t1 0.7838772192396901 70 Cpa|evm.model.tig00001049.35 DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica tig00001049_g6681.t1 0.7819905651826251 71 Cpa|evm.model.tig00000325.10 Cell cycle.regulation.cyclins.CYL1-type cyclin tig00000325_g24088.t1 0.7806820683362792 72 Cpa|evm.model.tig00021366.8 tig00021366_g20839.t1 0.7797199121203807 75 Cpa|evm.model.tig00021589.14 tig00021589_g22719.t1 0.7793339156680514 76 Cpa|evm.model.tig00001073.22 tig00001073_g6830.t1 0.7791456982142023 77 Cpa|evm.model.tig00001420.2 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component tig00001420_g8689.t1 0.7790744029138259 79 Cpa|evm.model.tig00021438.9 tig00021168_g19128.t1 0.7779862537461203 79 Cpa|evm.model.tig00020961.100 tig00020961_g16719.t1 0.7772865708052022 82 Cpa|evm.model.tig00000498.101 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase tig00000498_g1680.t1 0.7767318449428722 83 Cpa|evm.model.tig00020603.39 Solute transport.channels.AMT family.ammonium transporter (AMT1-type) tig00020603_g11770.t1 0.7762490368099734 84 Cpa|evm.model.tig00000367.14 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor tig00000367_g24450.t1 0.7755948860324792 85 Cpa|evm.model.tig00021464.7 tig00021464_g21714.t1 0.7713925283621531 88 Cpa|evm.model.tig00021348.32 Inosine-5-monophosphate dehydrogenase OS=Vigna unguiculata tig00021348_g20535.t1 0.7701420445573824 90 Cpa|evm.model.tig00021366.9 tig00021366_g20839.t1 0.7661975452644587 91 Cpa|evm.model.tig00020812.10 RNA processing.RNA modification.rRNA/tRNA methylation.TRM3 tRNA guanosine-methyltransferase tig00020812_g14085.t1 0.7652464705411196 92 Cpa|evm.model.tig00001003.35 50S ribosomal protein L4, chloroplastic OS=Nicotiana tabacum tig00001003_g6290.t1 0.7648051737579227 94 Cpa|evm.model.tig00000889.52 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL17 component tig00000889_g5342.t1 0.7634812364475527 95 Cpa|evm.model.tig00020510.60 tig00020510_g9841.t1 0.7592353517511246 100