Sequence Description Alias PCC hrr Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 30783498, CHLD 0.935525887908 5 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 30775504 0.929966431125 2 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 30775172 0.928590997362 3 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 30787650 0.901259827206 17 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30791685, CHLI2 0.899648368366 24 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30778583, CHLI1 0.89411287493 22 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 30790156 0.893966083225 7 Cre06.g303700 30779468 0.893482607869 17 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 30777054 0.892455890432 20 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 30786587, GSA1 0.889556776255 16 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 30792635, CGL71 0.886127108069 21 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 30778727, CHLG 0.885636064013 25 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785008, UPD2 0.885014659612 35 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 30785467 0.883120004195 14 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785831, UPD3 0.879362253024 30 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 30791982, PPS2 0.877538447359 23 Cre02.g093450 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase(50.4.1 : 437.0) & Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana 30786142, FBA2 0.877021532826 17 Cre03.g145207 30787333, CPLD33 0.867609191537 19 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 30787325 0.865437740317 27 Cre13.g576760 30784132 0.861457886237 24 Cre07.g328075 30775217 0.860869720309 21 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 30783214, GUN4 0.859146056383 22 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 30777907, CMS1 0.854271723947 39 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 30780063, ALB3 0.854238722293 26 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II 30775292, KAS2 0.853916389034 25 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 30786314, ALAD1 0.852157835853 26 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 30793256 0.85055896244 33 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 30776945 0.850358009932 28 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 30777960, RMT1 0.850285727819 29 Cre12.g524500 30793297, RMT2 0.845598696917 30 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 30789075 0.845134775794 40 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) 30790817, PRX6 0.84501734214 32 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 30789577, POR1 0.844407791174 33 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 30789622 0.843891059451 44 Cre03.g155200 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.chorismate mutase 30788064, CHM1 0.843404026152 35 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 30790814 0.8421359006 36 Cre01.g045902 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component 30789449 0.841803757263 37 Cre04.g231026 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component 30791302, SRP43 0.839779638266 38 Cre16.g681900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 30777143, SCY1 0.837028902787 59 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 30778701 0.834057179778 40 Cre09.g416200 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 30781424, MBB1 0.832721040866 41 Cre06.g300700 30779548 0.831855529332 48 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 30791717 0.826542300456 43 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 30777211 0.825632532555 44 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30782338, ANK29 0.824355405539 45 Cre03.g206550 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 30787385 0.823755708663 46 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30776050, UPD1 0.822341028102 47 Cre08.g377150 30773438 0.819492916636 48 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 30792631, CGL38 0.817575277003 49 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 30784921, CPX2 0.817566795693 50 Cre12.g492350 30792781 0.812406890525 51 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 30787751, CGL24 0.811038584358 52 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 30783932 0.808673638085 53 Cre10.g439350 30789999 0.805395730192 54 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 30774423, PSBP6 0.804927179609 84 Cre07.g334350 30775180 0.804679021664 56 Cre14.g609300 30776640 0.803169860513 57 Cre01.g042800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 30789170, DVR1 0.799861897759 81 Cre12.g517900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component 30792082, SCA1 0.796613334807 59 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 30775099, FDX4 0.796118174748 60 Cre10.g457650 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component 30790208 0.795727546613 61 Cre17.g702500 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 30782205, TAB2 0.795368213424 62 Cre09.g396300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 30781023, PPX1 0.793534798993 82 Cre01.g017350 30789562 0.793087661996 64 Cre09.g398289 1-acyl-sn-glycerol-3-phosphate acyltransferase CHLREDRAFT_174358 OS=Chlamydomonas reinhardtii 30781171 0.792678324417 65 Cre03.g209841 30787009 0.792416734216 66 Cre14.g625000 30776446 0.790476959216 67 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase 30790114, ADK2 0.789699521991 68 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 30783049 0.78958759148 98 Cre10.g429150 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.anthranilate phosphoribosyltransferase 30790910, PRT1 0.789188689131 92 Cre03.g174750 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 30787138, CYN26 0.787630314585 94 Cre08.g369000 30773590 0.78691955496 72 Cre06.g280650 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.Y3IP1 protein 30780166, CGL59 0.783178223535 73 Cre01.g030900 Coenzyme metabolism.phylloquinone synthesis.2-succinylbenzoate:CoA ligase 30788595 0.782398493838 74 Cre12.g508850 30793335 0.78158142916 75 Cre01.g010848 30789480 0.781093560788 76 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 30787386, DLA2 0.780761011251 79 Cre12.g554103 30792913, CGL74 0.780115817686 99 Cre08.g375550 30773638 0.774143520807 79 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30777930, FAP269 0.772773221687 80 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 30786848, TEF10a 0.770809136291 90 Cre12.g496700 30792698 0.770012203421 82 Cre09.g389393 30780814 0.769505943129 83 Cre12.g484000 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.carboxyltransferase beta subunit 30792400 0.768533220199 84 Cre09.g393173 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 30780340, ELI2 0.767577286157 85 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 30788900, BCC2 0.763272921683 87 Cre08.g371650 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Hcf106 component 30773883, TAT2 0.758113281992 96 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 30788009 0.75782754784 90 Cre12.g530100 30792933, CGL83 0.757440859938 91 Cre03.g194200 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E1 pyruvate dehydrogenase component.beta subunit 30787000, PDH2 0.757078495187 92 Cre11.g467724 30775910 0.755551452589 93 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 30787765, RPI1 0.755263563331 94 Cre17.g726450 30782107 0.752850951884 95 Cre04.g213100 30791212, CGLD7 0.751858930627 96 Cre03.g188700 Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana 30787522, PLP6 0.750136393518 97 Cre10.g435850 30789847, CPLD24 0.747974287723 98