Sequence Description Alias PCC hrr Cpa|evm.model.tig00000955.10 DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) tig00000955_g5782.t1 0.9636714567762551 6 Cpa|evm.model.tig00000248.71 tig00000248_g21830.t1 0.9614520282196375 9 Cpa|evm.model.tig00001310.4 tig00001310_g8153.t1 0.9560213476901865 8 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000586_g2256.t1 0.9537864606323798 7 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana tig00000681_g3064.t1 0.9501802273777739 7 Cpa|evm.model.tig00000670.28 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000670_g3045.t1 0.9482201201076857 7 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9475481447974959 16 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.9454359779498747 18 Cpa|evm.model.tig00000310.32 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000310_g23954.t1 0.944800930498174 10 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9439196321249697 16 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.9422572979657866 18 Cpa|evm.model.tig00000093.172 tig00000093_g3599.t1 0.9404375697855716 12 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.9323934347642593 30 Cpa|evm.model.tig00021257.23 tig00021257_g19763.t1 0.9307676358707806 14 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9282412938767307 40 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000093_g3534.t1 0.9259083445555548 44 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.9246808571984588 40 Cpa|evm.model.tig00000691.29 tig00000691_g3181.t1 0.9222274015687917 18 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.9215184319926802 19 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana tig00021579_g22443.t1 0.9191778818181693 39 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.9178522575904398 49 Cpa|evm.model.tig00021339.48 tig00021339_g20435.t1 0.917037932031488 22 Cpa|evm.model.tig00021179.22 Nutrient uptake.iron uptake.iron storage.VIT-type iron transporter tig00021179_g19237.t1 0.9137545922692755 23 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.912396616894217 47 Cpa|evm.model.tig00000480.41 tig00000480_g1309.t1 0.9112793925156627 34 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana tig00000823_g4555.t1 0.9097435300859692 26 Cpa|evm.model.tig00020941.39 tig00020941_g16231.t1 0.9096151289639284 32 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.9086089060735479 28 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.9083002489180052 46 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.9075462195133294 53 Cpa|evm.model.tig00000241.135 tig00000241_g21000.t1 0.906377022030144 31 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.9040716939972899 50 Cpa|evm.model.tig00020563.171 Protein degradation.peptidase families.metallopeptidase activities.M48 families.PGM48 zinc metalloprotease tig00020563_g11372.t1 0.9039047053274695 33 Cpa|evm.model.tig00000367.31 tig00000367_g24467.t1 0.9033981915392644 34 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.9009927531367828 52 Cpa|evm.model.tig00000215.61 tig00000215_g18599.t1 0.9008064966641355 36 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.9005953621446096 62 Cpa|evm.model.tig00000711.69 DNA repair protein RAD5B OS=Arabidopsis thaliana tig00000711_g3431.t1 0.9003983399616255 38 Cpa|evm.model.tig00001416.7 tig00001416_g8954.t1 0.9002228381681826 39 Cpa|evm.model.tig00020603.30 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana tig00020603_g11762.t1 0.9001057152551718 40 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.8977070772401927 53 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.8956770612049857 42 Cpa|evm.model.tig00001155.24 Protein NCA1 OS=Arabidopsis thaliana tig00001155_g7330.t1 0.8956339199942038 65 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.8944407187269016 73 Cpa|evm.model.tig00021332.16 tig00021332_g20335.t1 0.8931834870408628 45 Cpa|evm.model.tig00000073.49 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter tig00000073_g1729.t1 0.8924646702017585 46 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.8894779091185794 95 Cpa|evm.model.tig00001416.8 Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana tig00001416_g8954.t1 0.8890569885474142 48 Cpa|evm.model.tig00000455.54 tig00000455_g1052.t1 0.8890502040851935 66 Cpa|evm.model.tig00020553.66 tig00020553_g10555.t1 0.8877814595349048 52 Cpa|evm.model.tig00000144.84 tig00000144_g9076.t1 0.8874697864932234 51 Cpa|evm.model.tig00000553.12 tig00000553_g2082.t1 0.8869225231232435 52 Cpa|evm.model.tig00000194.65 tig00000194_g14792.t2 0.885257647214607 53 Cpa|evm.model.tig00000269.112 tig00000269_g23774.t1 0.8852018520716036 54 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.8825084953585021 62 Cpa|evm.model.tig00021254.2 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor tig00021254_g19677.t1 0.8804510864042088 56 Cpa|evm.model.tig00001490.9 tig00001490_g8974.t1 0.8804112115318307 57 Cpa|evm.model.tig00000215.107 tig00000215_g18646.t1 0.8797369160099073 67 Cpa|evm.model.tig00020537.49 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type) tig00020537_g10271.t1 0.8793823031421695 59 Cpa|evm.model.tig00020710.33 tig00020710_g13266.t1 0.8790005826550498 60 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.8776153245602468 79 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.876152338764753 68 Cpa|evm.model.tig00000241.114 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase tig00000241_g20980.t1 0.8757923015149968 64 Cpa|evm.model.tig00020553.74 tig00020553_g10564.t1 0.8744422528011014 66 Cpa|evm.model.tig00021108.20 tig00021108_g18310.t1 0.8742964583261019 91 Cpa|evm.model.tig00000215.11 tig00000215_g18540.t1 0.8742255242739224 69 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana tig00020961_g16679.t1 0.8736634452520334 70 Cpa|evm.model.tig00000169.34 Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana tig00000169_g11906.t1 0.8730669710166237 71 Cpa|evm.model.tig00021494.27 tig00021494_g21938.t1 0.872711015549021 72 Cpa|evm.model.tig00001374.9 tig00001374_g8501.t1 0.8710934033488748 73 Cpa|evm.model.tig00021038.81 Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana tig00021038_g17570.t1 0.8701725000924343 75 Cpa|evm.model.tig00020554.147 tig00020554_g10924.t1 0.8695643608432583 76 Cpa|evm.model.tig00000391.27 tig00000391_g24860.t1 0.8692004544489527 93 Cpa|evm.model.tig00020960.66 tig00020960_g16592.t1 0.8690961104836658 78 Cpa|evm.model.tig00000478.28 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00000478_g1276.t1 0.8687399287341595 79 Cpa|evm.model.tig00021358.2 tig00021045_g17649.t1 0.8661337726894923 80 Cpa|evm.model.tig00000796.24 tig00000796_g4247.t1 0.8659846910585709 89 Cpa|evm.model.tig00021036.35 Lipid metabolism.lipid degradation.glycerol degradation.FAD-dependent glycerol-3-phosphate dehydrogenase tig00021036_g17307.t1 0.864869130352056 82 Cpa|evm.model.tig00001094.34 Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana tig00001094_g7006.t1 0.8639052904134755 84 Cpa|evm.model.tig00000367.32 tig00000367_g24467.t1 0.8625292327841416 85 Cpa|evm.model.tig00021179.43 tig00021179_g19257.t1 0.8590699218281258 88 Cpa|evm.model.tig00021680.17 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 69.5) tig00021680_g23039.t1 0.8579844316460131 90 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8566243538882844 92 Cpa|evm.model.tig00020911.11 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana tig00020911_g15711.t1 0.8553109871033808 94 Cpa|evm.model.tig00001017.6 tig00001017_g6252.t1 0.8533629432128054 95 Cpa|evm.model.tig00020560.15 tig00020560_g11080.t1 0.8526093472404859 97 Cpa|evm.model.tig00020961.55 tig00020961_g16677.t1 0.8521964174850666 98