Sequence Description Alias PCC hrr Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 30777907, CMS1 0.882710497359 18 Cre13.g576760 30784132 0.882149675119 14 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 30787751, CGL24 0.880241672045 3 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 30789622 0.877400774061 19 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 30787650 0.872668661807 32 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 30793256 0.869047741079 15 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 30783932 0.867605078653 7 Cre03.g174750 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 30787138, CYN26 0.865660727029 21 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 30783498, CHLD 0.862482303786 42 Cre03.g145207 30787333, CPLD33 0.862287544786 21 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30791685, CHLI2 0.860831430363 47 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785008, UPD2 0.858407572514 50 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 30789075 0.855544042547 34 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 30776945 0.854454623099 14 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 30787325 0.849491973445 34 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 30777960, RMT1 0.847472843693 21 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 30792635, CGL71 0.847126775008 55 Cre12.g510050 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component 30792531, CTH1 0.844863073071 18 Cre10.g443500 30789803 0.841441716537 19 Cre11.g467770 Cellular respiration.glycolysis.cytosolic glycolysis.phosphoglycerate kinase 30775977, PGK1 0.838432908405 20 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) 30790817, PRX6 0.838069061722 21 Cre06.g303700 30779468 0.836570016385 61 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785831, UPD3 0.83577845592 54 Cre05.g243050 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin 30783290 0.831430940275 25 Cre14.g625000 30776446 0.831134547473 25 Cre17.g715500 30782483 0.829924564739 26 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 30785467 0.82898688125 40 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 30777054 0.828561267099 52 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 30786587, GSA1 0.828264011246 41 Cre06.g300700 30779548 0.827936779961 51 Cre09.g396300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 30781023, PPX1 0.827187244106 44 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 30783185, FTSY 0.825632532555 44 Cre02.g111450 30785423, TEF4 0.821808898887 33 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 30791717 0.819308980668 40 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 30790156 0.818795708072 53 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 30775172 0.818144593865 56 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 30778727, CHLG 0.817448746844 62 Cre12.g510650 Carbohydrate metabolism.gluconeogenesis.cytosolic fructose-1,6-bisphosphatase 30792164, FBP1 0.817428396672 38 Cre12.g554800 Photosynthesis.calvin cycle.phosphoribulokinase 30793573, PRK1 0.815538799105 39 Cre12.g496700 30792698 0.814491467835 40 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 30791982, PPS2 0.814240987341 69 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 30792631, CGL38 0.814104424961 42 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 30783214, GUN4 0.813022042117 43 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 30786314, ALAD1 0.812997968469 44 Cre03.g151650 30787562 0.812871084481 45 Cre03.g182150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb32 protein 30787302, TEF8 0.811610222958 46 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30777930, FAP269 0.809980049177 47 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30778583, CHLI1 0.804110252338 71 Cre01.g042800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 30789170, DVR1 0.803724256956 71 Cre02.g120100 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.small subunit 30785539, RBCS1 0.802333308634 50 Cre11.g476750 Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii 30775686, FNR1 0.801746432391 51 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 30789577, POR1 0.801105559729 52 Cre10.g452050 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa4-type component 30790835, LHCA4 0.799571433658 53 Cre08.g366050 30774169 0.798937903027 54 Cre03.g206550 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 30787385 0.798558961584 55 Cre12.g531900 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 30791967 0.795016819803 56 Cre07.g334350 30775180 0.794365964362 57 Cre12.g524500 30793297, RMT2 0.793445465677 58 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30776050, UPD1 0.789105484749 59 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 30790814 0.7885013118 60 Cre01.g051500 30788842 0.788270197401 61 Cre02.g093450 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase(50.4.1 : 437.0) & Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana 30786142, FBA2 0.787282263239 96 Cre06.g268600 External stimuli response.temperature.Csd (cold-shock-domain) protein 30779749, NAB1 0.786472362155 63 Cre06.g290300 30778545 0.786361864227 64 Cre10.g435850 30789847, CPLD24 0.784210886352 65 Cre12.g530100 30792933, CGL83 0.784109001798 66 Cre12.g558900 Cytochrome b6-f complex subunit petO, chloroplastic OS=Chlamydomonas reinhardtii 30793117, PETO 0.782801346345 67 Cre06.g284600 30779991, RBD2 0.782376097919 68 Cre03.g209841 30787009 0.78182596685 69 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase 30790114, ADK2 0.780789914064 70 Cre10.g452100 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY 30790404, PSBY2 0.779472302007 71 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30782338, ANK29 0.778852792476 73 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 30775504 0.77570189312 76 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 30784921, CPX2 0.775407867749 76 Cre17.g696350 30782536 0.774811424533 77 Cre04.g213100 30791212, CGLD7 0.773425794901 78 Cre16.g688414 30777311 0.772856652915 79 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 30787386, DLA2 0.771268670532 88 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 30780063, ALB3 0.771149428085 82 Cre13.g588100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 30783969 0.770005986456 83 Cre06.g278213 Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum 30779171, LHCA6 0.766052973485 84 Cre07.g325736 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana 30774660 0.762487362831 85 Cre07.g323700 30775193 0.761637066328 86 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 30787765, RPI1 0.761374828146 87 Cre13.g608000 30784318, CPLD52 0.759987451822 88 Cre11.g467689 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC 30775730, PETC 0.757961299881 89 Cre07.g325500 Phytohormones.abscisic acid.perception and signalling.membrane-localized receptors.ABAR chloroplast envelope-localized receptor 30775304 0.757685892463 90 Cre06.g269100 30778738 0.757207337355 91 Cre17.g720250 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb4-type component 30782643, LHCB4 0.757078609835 92 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 30788900, BCC2 0.756826125027 93 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 30788009 0.751718422289 94 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 30773407, PSBP4 0.751159266683 99 Cre08.g360950 30773425 0.750254236399 96 Cre07.g342150 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase 30774890, HEM1 0.749215895271 97 Cre12.g510400 30793179, RBD4 0.74847425735 98 Cre12.g508850 30793335 0.747977836694 99