Sequence Description Alias PCC hrr Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 30787325 0.952391093845 2 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30777930, FAP269 0.936815342535 2 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 30792631, CGL38 0.936245024844 3 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 30789622 0.932161612906 4 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 30778727, CHLG 0.93124066835 5 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30791685, CHLI2 0.924954277609 14 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 30786587, GSA1 0.922349435564 7 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 30787650 0.921193500215 8 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 30782338, ANK29 0.92049087824 9 Cre13.g576760 30784132 0.918777197813 10 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785831, UPD3 0.910716117849 13 Cre03.g145207 30787333, CPLD33 0.900605800303 12 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30785008, UPD2 0.90023892773 25 Cre10.g457650 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component 30790208 0.891260525243 14 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 30785467 0.8852583475 15 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 30789075 0.883802954964 19 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 30774423, PSBP6 0.876645826708 23 Cre13.g602650 Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana 30784675 0.874869380343 18 Cre06.g303700 30779468 0.872691523377 32 Cre05.g243050 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin 30783290 0.872555192306 20 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 30792635, CGL71 0.871744353732 32 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 30786314, ALAD1 0.87127429523 22 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 30791982, PPS2 0.870490359824 29 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 30775504 0.866164210429 24 Cre04.g213100 30791212, CGLD7 0.86252084287 25 Cre01.g014000 30788951 0.856478406021 26 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 30784921, CPX2 0.855126752904 27 Cre06.g284600 30779991, RBD2 0.85485011748 28 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 30777054 0.854343460732 34 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 30788009 0.854214529555 30 Cre03.g209841 30787009 0.853771757023 31 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 30778583, CHLI1 0.852176044636 37 Cre13.g602450 30784340 0.851175353342 33 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 30783214, GUN4 0.850725448097 34 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 30788900, BCC2 0.850119449192 35 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 30793256 0.846665427192 36 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 30777907, CMS1 0.845695426101 45 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 30791717 0.842838095432 38 Cre13.g602350 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase 30784267 0.841496479165 39 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 30775099, FDX4 0.841460841761 40 Cre02.g145050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 30785791, CMK1 0.840583244582 41 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 30783498, CHLD 0.837543647107 54 Cre17.g720250 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb4-type component 30782643, LHCB4 0.836810747238 43 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 30783049 0.836416931939 44 Cre07.g321300 30775021 0.836079698437 45 Cre17.g715500 30782483 0.835166363876 46 Cre01.g051500 30788842 0.834023927581 47 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 30783185, FTSY 0.831855529332 48 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 30773407, PSBP4 0.831834553049 49 Cre03.g174750 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 30787138, CYN26 0.830512855454 50 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 30777211 0.827936779961 51 Cre03.g208050 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD) 30786701 0.826961686785 52 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 30777960, RMT1 0.823235507338 53 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 30783932 0.819550603061 54 Cre10.g452050 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa4-type component 30790835, LHCA4 0.815350812091 55 Cre03.g182150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb32 protein 30787302, TEF8 0.814696991312 56 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 30790814 0.814669196334 57 Cre12.g510050 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component 30792531, CTH1 0.811261710267 58 Cre16.g679300 30777569 0.810734353557 59 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 30787386, DLA2 0.806345757331 60 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 30775172 0.805178046347 73 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 30780063, ALB3 0.805068842831 62 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase 30790114, ADK2 0.804274469265 63 Cre17.g732250 30782090 0.803752075694 64 Cre09.g396300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 30781023, PPX1 0.80374787372 66 Cre07.g328075 30775217 0.802287954252 66 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 30789577, POR1 0.802156880115 67 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 30787751, CGL24 0.80215150144 68 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 30790156 0.801063646638 69 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 30778701 0.800734870132 70 Cre07.g335700 30774671 0.796982107019 71 Cre16.g673650 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb5-type component 30777655, LHCB5 0.796901784746 72 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) 30790817, PRX6 0.79671897433 73 Cre10.g438550 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Tha4 component 30790296, TAT1 0.792020033639 75 Cre02.g111450 30785423, TEF4 0.791119165078 76 Cre09.g396213 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO 30780284, PSBO 0.788240893364 77 Cre13.g580350 30784122 0.786827933675 78 Cre10.g425900 Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana 30790196, LHCA5 0.784899174329 80 Cre03.g171100 30787901 0.783404372301 81 Cre02.g073850 30785212, CGL54 0.78147263372 82 Cre13.g588100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 30783969 0.779176950722 84 Cre02.g074100 30785783 0.779131842896 85 Cre12.g557050 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 30791805, CPLD8 0.779108794677 86 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 30776050, UPD1 0.778459322307 87 Cre07.g334550 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaO 30774481, PSAO 0.773691321493 88 Cre10.g452100 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY 30790404, PSBY2 0.773691095523 89 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 30776945 0.773649101599 90 Cre10.g435850 30789847, CPLD24 0.773366219291 91 Cre06.g278213 Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum 30779171, LHCA6 0.773213421921 92 Cre08.g369000 30773590 0.766671711998 93 Cre07.g325734 Nucleotide metabolism.deoxynucleotide metabolism.nucleoside diphosphate kinase 30774396 0.76557465813 94 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 30786848, TEF10a 0.764047965867 96 Cre11.g475850 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA2 protein 30775881, ZNJ1 0.763603407199 96 Cre12.g550850 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.Viridiplantae-specific components.OEC23 component PsbP 30791734, PSBP1 0.759746701098 97 Cre01.g052100 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component 30788991, PRPL18 0.757370901877 98 Cre17.g726450 30782107 0.757333030008 99 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 30787765, RPI1 0.757258317913 100