Sequence Description Alias PCC hrr Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana tig00020961_g16679.t1 0.9485488329559172 1 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.9273549124150757 18 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.925536969900982 25 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.9208566583741326 38 Cpa|evm.model.tig00000169.34 Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana tig00000169_g11906.t1 0.9178703568611043 8 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.9095688753600949 25 Cpa|evm.model.tig00020710.126 tig00020710_g13390.t1 0.904017383050127 7 Cpa|evm.model.tig00001374.9 tig00001374_g8501.t1 0.9039085678516943 10 Cpa|evm.model.tig00000350.14 tig00000350_g24314.t1 0.9033358389752585 12 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.899975169052258 69 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8993332132253418 11 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.8983083149250448 60 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.8976811535572823 57 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.896198274822961 71 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.8950594101592244 71 Cpa|evm.model.tig00020603.30 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana tig00020603_g11762.t1 0.8946630076812825 21 Cpa|evm.model.tig00000640.27 tig00000640_g2781.t1 0.8938261153643561 17 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.8934824237432659 77 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.8921048626043537 78 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.8912769961935637 32 Cpa|evm.model.tig00000241.114 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase tig00000241_g20980.t1 0.890982390372937 23 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.8903359111126721 79 Cpa|evm.model.tig00001094.34 Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana tig00001094_g7006.t1 0.8870122406478608 24 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.8854430789423616 67 Cpa|evm.model.tig00020911.11 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana tig00020911_g15711.t1 0.8852992974281699 26 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.884196805022534 100 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.8834495576459143 89 Cpa|evm.model.tig00000796.24 tig00000796_g4247.t1 0.882673415637261 66 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.8823360187699012 71 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana tig00000681_g3064.t1 0.8822537227349085 89 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.8816579601917135 100 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.8804283939345277 100 Cpa|evm.model.tig00000342.41 tig00000342_g24225.t1 0.8800099580744276 34 Cpa|evm.model.tig00020675.39 tig00020675_g12623.t1 0.879971168338657 36 Cpa|evm.model.tig00000863.53 tig00000863_g5008.t1 0.8788475575802592 50 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.8777331463092422 40 Cpa|evm.model.tig00021339.48 tig00021339_g20435.t1 0.8762101193075077 74 Cpa|evm.model.tig00020554.147 tig00020554_g10924.t1 0.8759867641331126 42 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8749353808155251 64 Cpa|evm.model.tig00000402.46 tig00000402_g223.t1 0.8744422528011014 66 Cpa|evm.model.tig00020553.66 tig00020553_g10555.t1 0.8738921424565411 79 Cpa|evm.model.tig00000711.69 DNA repair protein RAD5B OS=Arabidopsis thaliana tig00000711_g3431.t1 0.8710122091072995 46 Cpa|evm.model.tig00000478.28 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00000478_g1276.t1 0.8687176025997942 49 Cpa|evm.model.tig00020554.98 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) tig00020554_g10876.t1 0.8679457395403651 50 Cpa|evm.model.tig00000254.78 Enzyme classification.EC_1 oxidoreductases.EC_1.8 oxidoreductase acting on sulfur group of donor(50.1.8 : 227.9) & Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum tig00000254_g22533.t1 0.8667983968978258 51 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana tig00000823_g4555.t1 0.8661791016707103 52 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.8652564429108007 87 Cpa|evm.model.tig00000949.8 tig00000949_g5719.t1 0.8612690574766375 59 Cpa|evm.model.tig00000691.29 tig00000691_g3181.t1 0.8610309036095561 67 Cpa|evm.model.tig00020911.37 tig00020911_g15741.t1 0.8606268810067382 61 Cpa|evm.model.tig00020710.33 tig00020710_g13266.t1 0.8600992675187256 62 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.8587263190430854 88 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.8570132396572042 95 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.8570003379151264 90 Cpa|evm.model.tig00021108.21 tig00021108_g18310.t1 0.8555891465231111 69 Cpa|evm.model.tig00021038.81 Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana tig00021038_g17570.t1 0.8555221465246886 70 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.8550650748790003 80 Cpa|evm.model.tig00020944.37 tig00020944_g16385.t1 0.8533084051946198 75 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.8502401173349746 99 Cpa|evm.model.tig00020952.27 Deoxyribodipyrimidine photo-lyase OS=Oryza sativa subsp. japonica tig00020952_g16501.t1 0.8500474260290038 77 Cpa|evm.model.tig00000980.32 tig00000980_g6160.t1 0.8491345524037066 80 Cpa|evm.model.tig00000882.23 tig00000882_g5268.t1 0.8442752237030191 87 Cpa|evm.model.tig00000215.61 tig00000215_g18599.t1 0.8435257671134958 99 Cpa|evm.model.tig00021037.52 tig00021037_g17460.t1 0.8404042587559643 93 Cpa|evm.model.tig00000955.10 DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) tig00000955_g5782.t1 0.8399417002237969 95 Cpa|evm.model.tig00020537.60 tig00020537_g10285.t1 0.838907088091187 97 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000586_g2256.t1 0.8366041074380975 100