Sequence Description Alias PCC hrr Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.9606834339555792 1 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.9493921774224113 2 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.9425351955012446 6 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9422220397693267 14 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.9394775654557987 9 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.9384398495866016 6 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.9357022985389939 27 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9341922617764159 29 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.9329270593520829 18 Cpa|evm.model.tig00001086.15 tig00001086_g6850.t1 0.9317777279587435 10 Cpa|evm.model.tig00021126.3 ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana tig00021126_g18456.t1 0.9317127800888412 11 Cpa|evm.model.tig00021517.29 tig00021517_g22017.t1 0.9315529576799123 12 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.929919378493607 22 Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.9277719035657245 19 Cpa|evm.model.tig00000551.6 tig00000551_g2028.t1 0.9268047448542341 26 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.9264864448897537 31 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.9237808666580274 17 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.9219422894167223 50 Cpa|evm.model.tig00021441.9 tig00021441_g21550.t1 0.9212861931903992 19 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9198696775857081 46 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9170831686053172 32 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.9162953715630081 22 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.9160910580862656 40 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.9157906309629135 28 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.9146253729331981 40 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.9146154360215278 43 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.9115337396049817 30 Cpa|evm.model.tig00021501.21 tig00021501_g21959.t1 0.9085894905428805 28 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.9069840431247308 29 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.9068247157259356 30 Cpa|evm.model.tig00020553.191 ABC transporter C family member 11 OS=Arabidopsis thaliana tig00020553_g10681.t1 0.9060657075667536 31 Cpa|evm.model.tig00000403.33 tig00000403_g289.t1 0.9048647248187949 32 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.9043973816563682 52 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.9003387166532469 46 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.899209594961069 35 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.8988546691030178 36 Cpa|evm.model.tig00001065.21 tig00001065_g6722.t1 0.8988519320443873 37 Cpa|evm.model.tig00020614.73 tig00020614_g12187.t1 0.897702023168479 38 Cpa|evm.model.tig00020848.14 tig00020848_g14540.t1 0.8967551620176154 39 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.8962796831487866 44 Cpa|evm.model.tig00020563.124 tig00020563_g11320.t1 0.89530753046524 41 Cpa|evm.model.tig00000718.2 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8947031235612334 42 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.8945898403835648 74 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.8931043766250675 79 Cpa|evm.model.tig00001525.4 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00001525_g9233.t1 0.8930787469585643 45 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8928686018640187 51 Cpa|evm.model.tig00021491.2 tig00021491_g21764.t1 0.892454674944912 47 Cpa|evm.model.tig00000169.33 tig00000169_g11905.t1 0.8924145823813063 48 Cpa|evm.model.tig00000704.23 ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Arabidopsis thaliana tig00000704_g3313.t1 0.8922326650710353 49 Cpa|evm.model.tig00021464.19 tig00021464_g21725.t1 0.8921587013217644 50 Cpa|evm.model.tig00021616.18 tig00021616_g22923.t1 0.8911549162335591 51 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.8904756378168762 52 Cpa|evm.model.tig00021135.25 tig00021135_g18947.t1 0.889663831513031 53 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.8889634279680334 54 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.8889155626507578 71 Cpa|evm.model.tig00000219.71 Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana tig00000219_g19507.t1 0.8887713763045669 56 Cpa|evm.model.tig00020961.58 Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica tig00020961_g16680.t1 0.8884420677931814 68 Cpa|evm.model.tig00021094.10 Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter tig00021094_g18099.t1 0.8877379706849085 58 Cpa|evm.model.tig00000204.30 tig00000204_g17698.t1 0.8873663126877542 59 Cpa|evm.model.tig00000344.14 0.8866843381849169 60 Cpa|evm.model.tig00021179.40 Carotenoid cleavage dioxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica tig00021179_g19254.t1 0.8854898980041686 61 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.8854477265563588 62 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8831279392808143 64 Cpa|evm.model.tig00000760.8 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000760_g3929.t1 0.8824953135345968 65 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca tig00000863_g5002.t1 0.8823396472041034 66 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.8821742288448418 86 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.8818766932220995 97 Cpa|evm.model.tig00020934.55 tig00020934_g16123.t1 0.8806882484065474 70 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana tig00020592_g11633.t1 0.8802100957906351 71 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.8797820630237818 74 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.8794705705005743 73 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.879059158612819 88 Cpa|evm.model.tig00000796.24 tig00000796_g4247.t1 0.8788406209963374 75 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.8784783353440294 77 Cpa|evm.model.tig00000718.1 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8778512045980841 77 Cpa|evm.model.tig00000949.8 tig00000949_g5719.t1 0.8773891245858474 78 Cpa|evm.model.tig00020592.44 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020592_g11677.t1 0.8771705379193311 79 Cpa|evm.model.tig00020801.37 Phytohormones.abscisic acid.synthesis.ABA3 xanthoxin oxidase molybdenum cofactor sulfurase tig00020801_g13919.t1 0.8771627645317146 80 Cpa|evm.model.tig00021493.51 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00021493_g21890.t1 0.8724534533563666 83 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020660_g12512.t1 0.872435957309175 84 Cpa|evm.model.tig00000157.5 Solute transport.carrier-mediated transport.MC-type solute transporter tig00000157_g9593.t1 0.8720156385003428 85 Cpa|evm.model.tig00000980.32 tig00000980_g6160.t1 0.8716625503248319 86 Cpa|evm.model.tig00021017.25 tig00021017_g17199.t1 0.8710665381880339 87 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.870567466192021 100 Cpa|evm.model.tig00000796.16 tig00000796_g4238.t1 0.8705547774338379 89 Cpa|evm.model.tig00000254.110 tig00000254_g22566.t1 0.8704152942454435 90 Cpa|evm.model.tig00021434.28 tig00021434_g21331.t1 0.870339143599884 91 Cpa|evm.model.tig00021318.57 Lipid metabolism.lipid transport.phospholipid transverse translocation.scramblase tig00021318_g20178.t1 0.870190846233497 92 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.869873469715176 93 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.8675072643150815 94 Cpa|evm.model.tig00000248.21 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana tig00000248_g21787.t1 0.8669214937291678 96 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.8661230029440034 97 Cpa|evm.model.tig00020538.64 tig00020538_g10371.t1 0.8655604291009427 99 Cpa|evm.model.tig00000076.15 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type) tig00000076_g2315.t1 0.8645957483000045 100