Sequence Description Alias PCC hrr Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.9576355907647439 4 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.951649409765535 10 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.9448862257537506 19 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.9441596249712024 5 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.9439227343588211 20 Cpa|evm.model.tig00020951.45 tig00020951_g16446.t1 0.9422655288390307 6 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.9377540406786116 19 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.9362470135938985 26 Cpa|evm.model.tig00020603.30 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana tig00020603_g11762.t1 0.936095163856549 9 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.9358033588267767 17 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.9353401892273536 26 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.9349616522491977 18 Cpa|evm.model.tig00000691.29 tig00000691_g3181.t1 0.9344132534322788 13 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9338035261424689 26 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.9306333572197484 15 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.9281849060798135 34 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.9278928842223432 17 Cpa|evm.model.tig00020553.74 tig00020553_g10564.t1 0.9273549124150757 18 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.9273051893451731 30 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.9270973983218798 34 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.9269438838613158 27 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9254318603425025 38 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000093_g3534.t1 0.9252602758952092 46 Cpa|evm.model.tig00000796.24 tig00000796_g4247.t1 0.9249266539676686 24 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.9230992377570628 29 Cpa|evm.model.tig00001374.9 tig00001374_g8501.t1 0.9214986947514999 26 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9204566568550359 40 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9203542912957959 48 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.9202555865913331 44 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9193427756169251 53 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana tig00000681_g3064.t1 0.9192824664974772 42 Cpa|evm.model.tig00000551.6 tig00000551_g2028.t1 0.9187538826153059 32 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana tig00000823_g4555.t1 0.9186263156379568 33 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9176186254029762 47 Cpa|evm.model.tig00000344.14 0.9169723896471456 35 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.9164777834346988 39 Cpa|evm.model.tig00000367.31 tig00000367_g24467.t1 0.9149133951599978 37 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9147750387007083 49 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana tig00020961_g16679.t1 0.9145872724770273 39 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.9135287545937636 41 Cpa|evm.model.tig00021494.27 tig00021494_g21938.t1 0.9131651268816808 41 Cpa|evm.model.tig00020563.171 Protein degradation.peptidase families.metallopeptidase activities.M48 families.PGM48 zinc metalloprotease tig00020563_g11372.t1 0.9114368424297138 42 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.9109081612053679 65 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.9100973924450655 44 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.9087618762944422 45 Cpa|evm.model.tig00001310.4 tig00001310_g8153.t1 0.9086074831014164 47 Cpa|evm.model.tig00000640.27 tig00000640_g2781.t1 0.9059806631186996 47 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.9048079021279745 48 Cpa|evm.model.tig00001490.9 tig00001490_g8974.t1 0.9040939436325579 49 Cpa|evm.model.tig00000402.46 tig00000402_g223.t1 0.9040716939972899 50 Cpa|evm.model.tig00001155.24 Protein NCA1 OS=Arabidopsis thaliana tig00001155_g7330.t1 0.9034648848408471 54 Cpa|evm.model.tig00000455.54 tig00000455_g1052.t1 0.9030378139890324 52 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.9010801238670615 53 Cpa|evm.model.tig00000241.114 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase tig00000241_g20980.t1 0.9002140371783622 54 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.8996902649633941 55 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.8994832117994604 56 Cpa|evm.model.tig00000093.172 tig00000093_g3599.t1 0.8993850767947493 57 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.8985903256933159 58 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.8978607871790082 66 Cpa|evm.model.tig00021435.52 tig00021435_g21433.t1 0.8959867958974527 60 Cpa|evm.model.tig00000949.8 tig00000949_g5719.t1 0.8947969386446116 61 Cpa|evm.model.tig00000215.61 tig00000215_g18599.t1 0.8945348710496328 62 Cpa|evm.model.tig00000711.69 DNA repair protein RAD5B OS=Arabidopsis thaliana tig00000711_g3431.t1 0.894388942439404 63 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020660_g12512.t1 0.8936633870999015 64 Cpa|evm.model.tig00000248.71 tig00000248_g21830.t1 0.8925234928177148 65 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.8924990816150496 66 Cpa|evm.model.tig00000254.128 tig00000254_g22588.t1 0.8919659541094567 67 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8905686734822563 68 Cpa|evm.model.tig00021108.21 tig00021108_g18310.t1 0.8905481235184591 69 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.8895248000258975 70 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.8887777457632374 84 Cpa|evm.model.tig00000367.32 tig00000367_g24467.t1 0.8886128985632505 72 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.8884566278364987 73 Cpa|evm.model.tig00021441.9 tig00021441_g21550.t1 0.8880268439450956 74 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.886682852893017 78 Cpa|evm.model.tig00000073.49 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter tig00000073_g1729.t1 0.885351703326275 76 Cpa|evm.model.tig00020710.126 tig00020710_g13390.t1 0.8840065813927979 77 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.8838580085175843 78 Cpa|evm.model.tig00000169.34 Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana tig00000169_g11906.t1 0.8837225731498936 79 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.8836773420893862 80 Cpa|evm.model.tig00020553.66 tig00020553_g10555.t1 0.8821320893694028 81 Cpa|evm.model.tig00000955.10 DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) tig00000955_g5782.t1 0.8815866205635812 82 Cpa|evm.model.tig00021339.48 tig00021339_g20435.t1 0.8815440642246918 83 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.8809366819817207 84 Cpa|evm.model.tig00020710.99 Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris tig00001368_g8404.t1 0.87921497117133 93 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8789839192380461 86 Cpa|evm.model.tig00000430.44 tig00000430_g633.t1 0.8788748407046418 87 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana tig00021579_g22443.t1 0.878405500132904 88 Cpa|evm.model.tig00020660.34 tig00020660_g12531.t1 0.878100969734793 89 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.8775191977609229 90 Cpa|evm.model.tig00000361.1 tig00000361_g24355.t1 0.8759498474809925 91 Cpa|evm.model.tig00021038.81 Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana tig00021038_g17570.t1 0.8759029720381495 92 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.8746889162606487 93 Cpa|evm.model.tig00001094.34 Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana tig00001094_g7006.t1 0.8746273252079486 94 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000586_g2256.t1 0.8733457590342107 95 Cpa|evm.model.tig00000144.84 tig00000144_g9076.t1 0.8731363315805156 96 Cpa|evm.model.tig00000411.40 Solute transport.carrier-mediated transport.MC-type solute transporter tig00000411_g543.t1 0.8713049076519295 98 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.8709264662550479 99 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.870567466192021 100