Sequence Description Alias PCC hrr Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component tig00000912_g5422.t1 0.9442185089256977 3 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.9440554264546713 7 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase tig00020553_g10634.t1 0.9406991384042155 3 Cpa|evm.model.tig00000037.19 tig00000037_g10087.t1 0.9384275237495538 4 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.9361890535715623 5 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.933483896400885 6 Cpa|evm.model.tig00000615.68 Ras-related protein RABA4a OS=Arabidopsis thaliana tig00000615_g2598.t1 0.9231675111053829 8 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer tig00000989_g6085.t1 0.9229000099906104 8 Cpa|evm.model.tig00000203.31 tig00000203_g17138.t1 0.9191528940968606 10 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase tig00000829_g4671.t1 0.9183648561327766 14 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.9181167293787739 11 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00020918_g15889.t1 0.9172708383663171 20 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana tig00021464_g21723.t1 0.9167988114049247 13 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.9159751308551752 19 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.9158111132202 15 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component tig00021435_g21391.t1 0.915521133971838 16 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.9121239599925661 17 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.910717031079734 36 Cpa|evm.model.tig00000829.11 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana tig00000829_g4654.t1 0.9070693753589354 19 Cpa|evm.model.tig00000912.18 tig00000912_g5423.t1 0.9070014871824877 23 Cpa|evm.model.tig00001030.11 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 263.1) & Calcium-dependent protein kinase 10 OS=Oryza sativa subsp. japonica tig00001030_g6452.t1 0.9054049211948726 21 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.9040891103849378 41 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.903297177751951 27 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.9032537390412305 24 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii tig00000912_g5414.t1 0.9025392840349815 51 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component tig00020553_g10649.t1 0.9011471053748138 26 Cpa|evm.model.tig00021589.1 tig00021589_g22707.t1 0.9010780566716243 39 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana tig00000144_g9159.t1 0.9007393712745151 41 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.9002968214569407 29 Cpa|evm.model.tig00020544.4 tig00020544_g10484.t1 0.8999950359271682 46 Cpa|evm.model.tig00001107.5 tig00001107_g7093.t1 0.8999275233466569 47 Cpa|evm.model.tig00022075.35 tig00022075_g23597.t1 0.8994805426570498 32 Cpa|evm.model.tig00021612.39 tig00021612_g22881.t1 0.899443829890965 33 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.8993997523079175 34 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase tig00000203_g17139.t1 0.8992662852382152 35 Cpa|evm.model.tig00000704.70 Intraflagellar transport protein 81 OS=Chlamydomonas reinhardtii tig00000704_g3354.t1 0.8979414116765387 36 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase tig00001107_g7096.t1 0.89756860395664 37 Cpa|evm.model.tig00000042.179 Intraflagellar transport protein 56 OS=Chlamydomonas reinhardtii tig00000042_g15583.t1 0.8966077795298789 38 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.8965874854613317 56 Cpa|evm.model.tig00021168.13 AP-2 complex subunit mu OS=Arabidopsis thaliana tig00021168_g19079.t1 0.8960805051960268 40 Cpa|evm.model.tig00001107.6 tig00001107_g7093.t1 0.895970909152313 46 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.8959457353765328 76 Cpa|evm.model.tig00001229.13 tig00001229_g7845.t1 0.8956776131963903 43 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana tig00000802_g4296.t1 0.8950596439459441 44 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.894726571715069 45 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.8937013475287109 47 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.8929395146702359 47 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit tig00020903_g15096.t1 0.8919746827574083 48 Cpa|evm.model.tig00000404.24 tig00000404_g388.t1 0.8919113864285448 49 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.8910503763842463 74 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.8907105908866736 51 Cpa|evm.model.tig00020801.87 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana tig00020801_g13969.t2 0.8906637042433716 54 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.8890670123029284 59 Cpa|evm.model.tig00020553.154 tig00020553_g10645.t1 0.8874079295793815 66 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana tig00000912_g5433.t1 0.8872017224343669 60 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000350_g24328.t1 0.8869940555294644 56 Cpa|evm.model.tig00000241.32 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component tig00000241_g20890.t1 0.886897511600014 57 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.8863269487591355 66 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana tig00000076_g2403.t1 0.8858176822620349 59 Cpa|evm.model.tig00020903.33 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit tig00020903_g15100.t1 0.8856951082346385 60 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component tig00000792_g4177.t1 0.884942132209716 61 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein tig00000042_g15484.t1 0.8843513988966366 62 Cpa|evm.model.tig00000829.24 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component tig00000829_g4665.t1 0.8837186312495718 63 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.8815662693112668 74 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.8809437913771624 65 Cpa|evm.model.tig00000704.46 Cilia- and flagella-associated protein 52 OS=Chlamydomonas reinhardtii tig00000704_g3333.t1 0.880372409568227 78 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component tig00000829_g4645.t1 0.8790388142602401 67 Cpa|evm.model.tig00001164.22 Dynein 18 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii tig00001164_g7410.t1 0.8790261779796733 68 Cpa|evm.model.tig00020848.59 Cytoskeleton.microtubular network.Dynein microtubule-based motor protein complex.intermediate chain tig00020848_g14589.t1 0.8774866254492129 83 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.8767151836973023 71 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.8766062327807947 72 Cpa|evm.model.tig00020589.5 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26 component tig00020589_g11619.t1 0.8764591034625059 73 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component tig00021571_g22362.t1 0.8763015822450783 74 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.8755190098076592 75 Cpa|evm.model.tig00020848.37 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase tig00020848_g14564.t1 0.8750499401657944 76 Cpa|evm.model.tig00021590.4 tig00021590_g22761.t1 0.8750323613439385 77 Cpa|evm.model.tig00020904.92 tig00020904_g15220.t1 0.8745469283552468 78 Cpa|evm.model.tig00000144.125 Calcineurin B-like protein 2 OS=Arabidopsis thaliana tig00000144_g9120.t1 0.8744945445594438 79 Cpa|evm.model.tig00000241.116 tig00000241_g20982.t1 0.874227916660314 80 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component tig00021348_g20598.t1 0.8741457364761729 81 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component tig00020903_g15104.t1 0.8739210734606305 82 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.8738834602201561 83 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component tig00000350_g24315.t1 0.8737860069307267 84 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit tig00000789_g4131.t1 0.8736528132528443 85 Cpa|evm.model.tig00021435.47 Calmodulin OS=Mougeotia scalaris tig00021435_g21427.t1 0.8734817962043291 86 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8730800526613848 87 Cpa|evm.model.tig00021234.21 tig00021234_g19395.t1 0.8726118089518591 88 Cpa|evm.model.tig00020848.76 0.8722713497232656 89 Cpa|evm.model.tig00001292.18 Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana tig00001292_g8051.t1 0.8717543348176349 90 Cpa|evm.model.tig00000388.23 tig00000388_g24784.t1 0.8713206341591062 91 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.8709773288801165 94 Cpa|evm.model.tig00001537.11 0.8699628033885983 93 Cpa|evm.model.tig00000404.25 tig00000404_g388.t1 0.8696410790672261 94 Cpa|evm.model.tig00022075.52 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana tig00022075_g23613.t1 0.8696151634871606 95 Cpa|evm.model.tig00000863.46 Cilia- and flagella-associated protein 20 OS=Chlamydomonas reinhardtii tig00000863_g4999.t1 0.869557927160534 96 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8689562093234681 97 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.8684827873348545 98 Cpa|evm.model.tig00021612.51 tig00021612_g22891.t1 0.8680799992608044 100