Sequence Description Alias PCC hrr Cpa|evm.model.tig00021532.11 tig00021532_g22191.t1 0.9040540480469926 2 Cpa|evm.model.tig00020961.105 tig00020961_g16724.t1 0.8892178476463761 4 Cpa|evm.model.tig00021350.37 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine gamma-synthase tig00021350_g20655.t1 0.8833638029414106 4 Cpa|evm.model.tig00021531.8 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ32/33 splicing factor tig00021531_g22171.t1 0.881818637196586 4 Cpa|evm.model.tig00021721.12 tig00021721_g23211.t1 0.87629611044871 5 Cpa|evm.model.tig00000498.61 tig00000498_g1638.t1 0.8716783051589128 6 Cpa|evm.model.tig00001214.5 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.SERRATE component tig00001214_g7547.t1 0.8708296503843931 7 Cpa|evm.model.tig00020875.14 Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC3 component tig00020875_g14891.t1 0.8700443111824775 8 Cpa|evm.model.tig00020553.199 tig00020553_g10689.t1 0.868882301695979 9 Cpa|evm.model.tig00000789.32 tig00000789_g4126.t1 0.864347361420919 10 Cpa|evm.model.tig00001155.28 Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana tig00001155_g7334.t1 0.8633306705352675 11 Cpa|evm.model.tig00020902.29 Proline iminopeptidase OS=Arabidopsis thaliana tig00020902_g14980.t1 0.8611359025990818 12 Cpa|evm.model.tig00000342.20 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component tig00000342_g24207.t1 0.8603123373005896 13 Cpa|evm.model.tig00021222.7 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.RNPS1 component tig00021222_g19364.t1 0.8583337585727467 14 Cpa|evm.model.tig00021493.5 Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica tig00021493_g21848.t1 0.8582431415830094 15 Cpa|evm.model.tig00001366.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.MET DNA methyltransferase tig00001366_g8376.t1 0.8568511013621627 16 Cpa|evm.model.tig00000076.102 tig00000076_g2399.t1 0.8552018734993965 17 Cpa|evm.model.tig00021742.20 tig00021742_g23332.t1 0.8544677154372977 18 Cpa|evm.model.tig00020830.66 Protein modification.phosphorylation.STE kinase superfamily.MAPKK kinase tig00020830_g14449.t1 0.8539990181265217 19 Cpa|evm.model.tig00000849.37 tig00000849_g4778.t1 0.8532316101642162 20 Cpa|evm.model.tig00000852.9 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RS31/40/41 splicing factor tig00000852_g5022.t1 0.8525814453034886 21 Cpa|evm.model.tig00021234.42 tig00021234_g19421.t1 0.8503702129982948 22 Cpa|evm.model.tig00021127.94 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.ArpC2 component tig00021127_g18773.t1 0.8470074432484754 23 Cpa|evm.model.tig00000663.51 Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.SAP18 associated component tig00000663_g2984.t1 0.8459513194382183 60 Cpa|evm.model.tig00001229.4 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component tig00001229_g7837.t1 0.843748240916179 39 Cpa|evm.model.tig00000789.53 Solute transport.primary active transport.V-type ATPase complex.membrane V0 subcomplex.subunit c tig00000789_g4145.t1 0.84066139724588 26 Cpa|evm.model.tig00021463.4 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-B component tig00021463_g21613.t1 0.840584948067919 27 Cpa|evm.model.tig00020830.122 tig00020830_g14510.t1 0.8403868952104162 38 Cpa|evm.model.tig00021720.15 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase tig00021720_g23185.t1 0.8390715011589505 29 Cpa|evm.model.tig00000093.38 Coenzyme metabolism.NAD/NADP biosynthesis.Preiss-Handler salvage pathway.nicotinate phosphoribosyltransferase tig00000093_g3474.t1 0.8390117720116791 30 Cpa|evm.model.tig00020952.48 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii tig00020952_g16506.t1 0.8387807453968679 31 Cpa|evm.model.tig00021433.19 Protein degradation.peptidase families.metallopeptidase activities.Leishmanolysin-type protease tig00021433_g21272.t1 0.838424146835369 32 Cpa|evm.model.tig00001086.23 tig00001086_g6857.t1 0.8379932438793869 33 Cpa|evm.model.tig00001224.11 tig00001224_g7634.t2 0.8378020664549877 34 Cpa|evm.model.tig00020830.127 tig00020830_g14514.t1 0.8321584696764152 35 Cpa|evm.model.tig00000113.32 tig00000113_g5602.t1 0.8307106051326649 51 Cpa|evm.model.tig00020961.138 tig00020961_g16758.t1 0.830641742734725 38 Cpa|evm.model.tig00021127.55 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.AMSH3 deubiquitinase tig00021127_g18732.t1 0.8303902693667695 39 Cpa|evm.model.tig00001049.7 Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur lyase(50.4.4 : 202.8) & Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana tig00001049_g6658.t1 0.8298803741117006 41 Cpa|evm.model.tig00021234.33 tig00021234_g19407.t1 0.829290020509105 41 Cpa|evm.model.tig00000863.29 tig00000863_g4983.t1 0.8287924213477594 52 Cpa|evm.model.tig00000826.13 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana tig00000826_g4578.t1 0.8278751891999145 57 Cpa|evm.model.tig00000142.19 tig00000142_g8654.t1 0.8274881023706355 44 Cpa|evm.model.tig00021326.23 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF60 component tig00021326_g20290.t1 0.8273273497562926 45 Cpa|evm.model.tig00020710.68 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF77/Rna14 component tig00020710_g13320.t1 0.827115581563879 63 Cpa|evm.model.tig00000852.38 tig00000852_g5049.t1 0.8251876135588576 47 Cpa|evm.model.tig00021464.4 tig00021464_g21711.t1 0.8247887398999788 68 Cpa|evm.model.tig00020927.32 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana tig00020927_g15961.t1 0.8232462473663986 49 Cpa|evm.model.tig00020553.172 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster D phosphatase tig00020553_g10663.t1 0.8226125224630761 50 Cpa|evm.model.tig00020614.84 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm1 component tig00020614_g12199.t1 0.8206657668950491 51 Cpa|evm.model.tig00000711.52 tig00000711_g3416.t1 0.8206130005126543 52 Cpa|evm.model.tig00020703.35 Protein translocation.endoplasmic reticulum.GET post-translational insertion system.GET4-GET5 scaffold subcomplex.GET4 GET3-recruitment component tig00020703_g13137.t1 0.8201523300123525 53 Cpa|evm.model.tig00021583.6 tig00021583_g22648.t1 0.8201014680987514 54 Cpa|evm.model.tig00021179.68 tig00021179_g19283.t1 0.8199969402524141 55 Cpa|evm.model.tig00021038.98 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor tig00021038_g17587.t1 0.8183090219937245 56 Cpa|evm.model.tig00022075.60 Lipid metabolism.glycerolipid synthesis.phosphatidylcholine.methylation pathway.N-methylphospholipid methyltransferase tig00022075_g23623.t1 0.8173843824064576 57 Cpa|evm.model.tig00000219.20 tig00000219_g19459.t1 0.8170526073954298 66 Cpa|evm.model.tig00000219.9 tig00000219_g19445.t1 0.8167279887702857 59 Cpa|evm.model.tig00020816.8 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component tig00020816_g14098.t1 0.8164999657052567 60 Cpa|evm.model.tig00000042.107 tig00000042_g15502.t1 0.8156361193807837 61 Cpa|evm.model.tig00001155.10 Protein ARABIDILLO 1 OS=Arabidopsis thaliana tig00001155_g7318.t1 0.8127079283279625 62 Cpa|evm.model.tig00021070.5 Multi-process regulation.programmed cell death.MCP1 metacaspase-like regulator tig00021070_g17810.t1 0.8126831461431316 77 Cpa|evm.model.tig00000142.4 tig00000142_g8640.t1 0.8118189917772147 64 Cpa|evm.model.tig00020961.54 tig00020961_g16676.t1 0.8117153743749658 65 Cpa|evm.model.tig00000455.23 tig00000455_g1012.t1 0.8104291503447053 66 Cpa|evm.model.tig00000402.16 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SCL28/30/33 splicing factor tig00000402_g193.t1 0.8093092357012189 67 Cpa|evm.model.tig00020553.137 Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.components.COX6a component tig00020553_g10626.t1 0.8092182441547899 68 Cpa|evm.model.tig00001024.6 Spliceosome-associated protein 130 A OS=Arabidopsis thaliana tig00001024_g6316.t1 0.8088256504298424 75 Cpa|evm.model.tig00001029.10 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.adenylosuccinate synthase tig00001029_g6409.t1 0.808322565253423 95 Cpa|evm.model.tig00001343.3 tig00001343_g8327.t1 0.8074677177757468 73 Cpa|evm.model.tig00021135.36 Adenosylhomocysteinase 2 OS=Arabidopsis thaliana tig00021135_g18955.t1 0.8074615333023581 74 Cpa|evm.model.tig00001628.7 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase regulatory protein tig00001628_g9434.t1 0.8068147259950559 76 Cpa|evm.model.tig00021462.11 tig00021462_g21576.t1 0.806324392021039 77 Cpa|evm.model.tig00021434.18 ABC transporter B family member 14 OS=Arabidopsis thaliana tig00021434_g21315.t1 0.8060080752686045 78 Cpa|evm.model.tig00000622.18 tig00000622_g2632.t1 0.8054160843738827 79 Cpa|evm.model.tig00000448.28 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALIS regulatory component tig00000448_g860.t1 0.8050570785910541 80 Cpa|evm.model.tig00001164.11 tig00001164_g7401.t1 0.8048587461232606 81 Cpa|evm.model.tig00000808.25 tig00000808_g4414.t1 0.8048357996336956 82 Cpa|evm.model.tig00000037.38 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component tig00000037_g10107.t1 0.8046646446791424 83 Cpa|evm.model.tig00001154.4 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component tig00001154_g7268.t2 0.8046454982730438 84 Cpa|evm.model.tig00001331.14 tig00001331_g8177.t1 0.804031787518468 85 Cpa|evm.model.tig00000670.30 Protein modification.phosphorylation.CMGC kinase superfamily.CK-II kinase.regulatory beta subunit tig00000670_g3047.t1 0.8037221983899536 86 Cpa|evm.model.tig00020610.97 tig00020610_g12042.t1 0.8034007658106939 87 Cpa|evm.model.tig00001286.8 tig00001286_g8025.t1 0.8015275835419956 88 Cpa|evm.model.tig00001067.28 tig00001067_g6787.t1 0.8014889806712532 90 Cpa|evm.model.tig00000093.29 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS41/VAM2 HOPS-specific component tig00000093_g3465.t1 0.8014746601592946 91 Cpa|evm.model.tig00020554.45 Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa tig00020554_g10828.t1 0.8007988311812025 93 Cpa|evm.model.tig00000865.49 tig00000865_g5100.t1 0.8000427884458196 94 Cpa|evm.model.tig00020710.41 tig00020710_g13275.t1 0.8000082257130888 95 Cpa|evm.model.tig00000863.31 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana tig00000863_g4985.t1 0.7998319145254587 96 Cpa|evm.model.tig00020564.21 tig00020564_g11422.t1 0.7996485421279715 97 Cpa|evm.model.tig00000404.42 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH3/10 matrix-AAA protease heterodimers.prohibitin component tig00000404_g402.t1 0.7992985975862608 98 Cpa|evm.model.tig00001525.7 Vacuole membrane protein KMS1 OS=Arabidopsis thaliana tig00001525_g9236.t1 0.7990718391486404 100