Sequence Description Alias PCC hrr Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.957438261531567 2 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana tig00021464_g21757.t1 0.9419652563418376 2 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component tig00021589_g22732.t1 0.9330144093996144 4 Cpa|evm.model.tig00001003.41 tig00001003_g6295.t1 0.9325181563625397 4 Cpa|evm.model.tig00021357.26 tig00021357_g20756.t1 0.9290774267389699 7 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica tig00020903_g15085.t1 0.926909265901742 6 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component tig00021319_g20258.t1 0.9244161587413064 18 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase tig00001049_g6659.t1 0.9228573771629321 8 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides tig00020531_g10062.t1 0.9224875643058152 9 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.919480974001603 17 Cpa|evm.model.tig00020531.35 tig00020531_g10036.t2 0.9186186160489215 12 Cpa|evm.model.tig00021464.49 Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana tig00021464_g21753.t1 0.9173227649896651 12 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.9164937267286507 13 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.9142546825757034 14 Cpa|evm.model.tig00000388.17 tig00000388_g24779.t1 0.9133261027754168 15 Cpa|evm.model.tig00021464.50 tig00021464_g21754.t1 0.9105497262097466 16 Cpa|evm.model.tig00001234.12 tig00001234_g7735.t1 0.9099863240494765 17 Cpa|evm.model.tig00000037.6 tig00000037_g10073.t1 0.9099584213853675 25 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.9054985185615573 19 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.9048965193492268 20 Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 0.9035340777904795 21 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component tig00000944_g5945.t1 0.9028763089620068 22 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.9026809074936458 23 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein tig00000829_g4658.t1 0.9022219847133315 24 Cpa|evm.model.tig00000912.15 tig00000912_g5420.t1 0.9021961981093435 25 Cpa|evm.model.tig00020544.4 tig00020544_g10484.t1 0.8994333717667251 47 Cpa|evm.model.tig00021357.6 tig00021357_g20739.t1 0.898896223455169 27 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8984049546229835 38 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor tig00001049_g6664.t1 0.8971339443305095 29 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica tig00020684_g12886.t1 0.8968039711472541 30 Cpa|evm.model.tig00000203.14 tig00000203_g17117.t1 0.8964938178470888 31 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.8927195429886892 63 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component tig00022075_g23621.t1 0.8916160924090002 90 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.8914751463929843 34 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.891014278641533 35 Cpa|evm.model.tig00000037.18 tig00020538_g10366.t1 0.8908241318563084 36 Cpa|evm.model.tig00001003.42 0.8904117919661014 37 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana tig00000217_g19173.t1 0.8897855292034191 38 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana tig00000217_g19158.t1 0.8878518083670357 39 Cpa|evm.model.tig00001372.8 0.8859235344636585 40 Cpa|evm.model.tig00001029.4 tig00001029_g6405.t1 0.8855678030380363 41 Cpa|evm.model.tig00000037.36 tig00000037_g10104.t1 0.8854722989562909 42 Cpa|evm.model.tig00020544.6 tig00020544_g10486.t1 0.8845574846157567 43 Cpa|evm.model.tig00021350.40 tig00021350_g20656.t1 0.884248559716844 44 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor tig00020903_g15115.t1 0.883958710725004 45 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana tig00020544_g10489.t1 0.883366512761731 46 Cpa|evm.model.tig00000037.26 tig00000037_g10095.t1 0.8832486079601597 47 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 tig00000704_g3318.t1 0.8831095608842591 49 Cpa|evm.model.tig00000388.16 Golgin candidate 5 OS=Arabidopsis thaliana tig00000388_g24779.t1 0.8825134022623571 49 Cpa|evm.model.tig00020554.13 tig00020554_g10799.t1 0.8804234591919481 50 Cpa|evm.model.tig00020531.29 0.8802053666903042 51 Cpa|evm.model.tig00000319.24 tig00000319_g24137.t1 0.8800683396941646 52 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.8789744828057505 64 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.8779912597140741 73 Cpa|evm.model.tig00000615.67 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Sof1 assembly factor tig00000615_g2597.t1 0.8766855353548284 55 Cpa|evm.model.tig00000944.32 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst tig00000944_g5956.t1 0.8760837855502068 56 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00021357_g20757.t1 0.8722491345255983 65 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 tig00021589_g22717.t1 0.8715220667719891 58 Cpa|evm.model.tig00001154.32 tig00001154_g7296.t1 0.8710584624193659 59 Cpa|evm.model.tig00000194.38 tig00000194_g14766.t1 0.8708545944280455 60 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.8707088544493352 61 Cpa|evm.model.tig00000842.34 tig00000842_g4855.t1 0.8694710825260915 62 Cpa|evm.model.tig00000704.47 tig00000704_g3334.t1 0.8693229484767319 63 Cpa|evm.model.tig00000704.58 Lipid metabolism.glycerolipid synthesis.phosphatidylglycerol.CDP-diacylglycerol synthase tig00000704_g3344.t1 0.8687974500142711 64 Cpa|evm.model.tig00000383.36 tig00000383_g24646.t1 0.8678527881629075 66 Cpa|evm.model.tig00000944.33 Peptidyl-prolyl cis-trans isomerase CYP65 OS=Arabidopsis thaliana tig00000944_g5956.t1 0.8671716729294583 68 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component tig00020538_g10321.t1 0.865776345423692 70 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component tig00000350_g24315.t1 0.8636883456718241 92 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8632460917096365 79 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana tig00001003_g6291.t1 0.8617856990311741 73 Cpa|evm.model.tig00000402.20 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).Ku70-Ku80 helicase complex.KU70 component tig00000402_g197.t1 0.8617206752305747 74 Cpa|evm.model.tig00000388.24 tig00000388_g24785.t1 0.8611346668479636 81 Cpa|evm.model.tig00020554.12 tig00020554_g10798.t1 0.8596638485946153 76 Cpa|evm.model.tig00001206.18 tig00001206_g7504.t1 0.8590245102560288 78 Cpa|evm.model.tig00020848.18 snRNA-activating protein complex subunit OS=Arabidopsis thaliana tig00020848_g14545.t1 0.8588973740156316 79 Cpa|evm.model.tig00000789.38 tig00000789_g4132.t1 0.8586545514408259 81 Cpa|evm.model.tig00000704.18 tig00000704_g3308.t1 0.8585963996935038 82 Cpa|evm.model.tig00000402.27 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component tig00000402_g205.t1 0.8579321947832664 83 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.8578820007794641 97 Cpa|evm.model.tig00020554.26 Cilia- and flagella-associated protein 53 OS=Chlamydomonas reinhardtii tig00020554_g10811.t1 0.8567796787481043 86 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana tig00000241_g20884.t1 0.8567405555601963 87 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.8561361518684772 88 Cpa|evm.model.tig00000388.35 tig00021094_g18105.t1 0.8561227089134138 89 Cpa|evm.model.tig00001027.12 tig00020911_g15757.t1 0.8557508197139433 90 Cpa|evm.model.tig00001229.11 tig00001229_g7843.t2 0.8555545397824663 91 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor tig00000789_g4132.t1 0.8551667921403703 93 Cpa|evm.model.tig00001049.9 tig00001049_g6659.t1 0.8550304653836165 94 Cpa|evm.model.tig00000829.22 Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana tig00000383_g24675.t1 0.8547020543601033 95 Cpa|evm.model.tig00020684.29 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 240.9) & Isoaspartyl peptidase/L-asparaginase OS=Lupinus luteus tig00020610_g12061.t1 0.8536365752505921 97 Cpa|evm.model.tig00020723.4 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1 PIC assembly factor tig00020723_g13423.t1 0.8528319817668356 98 Cpa|evm.model.tig00021319.37 tig00021319_g20231.t1 0.8524911295879303 99