Sequence Description Alias PCC hrr Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component tig00021589_g22732.t1 0.9426183628495444 2 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein tig00000829_g4658.t1 0.9322086648662717 2 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.9123809759993766 27 Cpa|evm.model.tig00021357.16 tig00021357_g20749.t1 0.9095909925914398 4 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.9074232093490376 17 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor tig00001049_g6664.t1 0.9057425723923991 13 Cpa|evm.model.tig00001466.9 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-7 component tig00001466_g8787.t1 0.9034213332430108 7 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana tig00000704_g3322.t1 0.9028763089620068 22 Cpa|evm.model.tig00021350.40 tig00021350_g20656.t1 0.8999875171658012 14 Cpa|evm.model.tig00020544.6 tig00020544_g10486.t1 0.8987637056476342 10 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica tig00000383_g24645.t1 0.8982890189117477 11 Cpa|evm.model.tig00021357.26 tig00021357_g20756.t1 0.8959255142382002 32 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase tig00021319_g20232.t1 0.8942988819224554 27 Cpa|evm.model.tig00021357.6 tig00021357_g20739.t1 0.8928481951201457 17 Cpa|evm.model.tig00000704.58 Lipid metabolism.glycerolipid synthesis.phosphatidylglycerol.CDP-diacylglycerol synthase tig00000704_g3344.t1 0.892283995660905 15 Cpa|evm.model.tig00020961.48 tig00020961_g16670.t1 0.8921874149548783 16 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.8902583109216963 35 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.8899851722826253 68 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.8852413688953781 49 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase tig00000912_g5432.t1 0.8838438429769133 57 Cpa|evm.model.tig00000944.41 Oxysterol-binding protein-related protein 3C OS=Arabidopsis thaliana tig00000944_g5963.t1 0.8833710571416228 21 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana tig00000217_g19173.t1 0.8816312972450556 45 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component tig00020554_g10917.t1 0.8811731659332824 30 Cpa|evm.model.tig00001265.7 tig00001265_g7893.t1 0.8790033726800918 24 Cpa|evm.model.tig00001154.32 tig00001154_g7296.t1 0.8782978637028966 25 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.878157072756457 26 Cpa|evm.model.tig00021589.4 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme tig00021589_g22709.t1 0.8780309673674097 27 Cpa|evm.model.tig00000204.43 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase tig00000204_g17710.t1 0.8776365849135125 28 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana tig00000241_g20884.t1 0.8751923846349898 30 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein tig00020553_g10655.t1 0.8743226324007711 48 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.8735701455405102 59 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit tig00000350_g24327.t1 0.8735066443847033 54 Cpa|evm.model.tig00021357.9 tig00021357_g20742.t1 0.871945188749785 34 Cpa|evm.model.tig00000402.39 tig00000402_g216.t1 0.8706297875846581 35 Cpa|evm.model.tig00020903.26 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 37.8) tig00020903_g15093.t1 0.8695687331102586 37 Cpa|evm.model.tig00000073.33 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.alpha catalytic subunit tig00000073_g1715.t2 0.8692093813090296 39 Cpa|evm.model.tig00000980.6 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00000980_g6131.t1 0.8686453158399594 40 Cpa|evm.model.tig00021493.39 tig00021493_g21884.t1 0.8674629400997069 41 Cpa|evm.model.tig00021352.56 tig00021352_g20723.t1 0.8660502061702521 43 Cpa|evm.model.tig00001049.9 tig00001049_g6659.t1 0.865838377971831 44 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component tig00000319_g24143.t1 0.8655732873710522 52 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana tig00021464_g21757.t1 0.8654126377935959 74 Cpa|evm.model.tig00000640.7 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana tig00000640_g2761.t1 0.8652659937299245 47 Cpa|evm.model.tig00021464.8 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana tig00021464_g21715.t1 0.8634662347097385 48 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component tig00000402_g218.t1 0.8632805738758481 50 Cpa|evm.model.tig00000704.63 tig00000704_g3347.t1 0.8632382035635385 52 Cpa|evm.model.tig00020848.29 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component tig00020848_g14556.t1 0.8632351799864066 52 Cpa|evm.model.tig00020554.42 tig00020554_g10824.t1 0.8625629835037352 53 Cpa|evm.model.tig00000217.17 Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris tig00000217_g19152.t1 0.8621505103602998 54 Cpa|evm.model.tig00000037.26 tig00000037_g10095.t1 0.8616637549878607 55 Cpa|evm.model.tig00001372.8 0.8614513985476568 66 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 tig00000704_g3318.t1 0.8605510188627389 95 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana tig00000217_g19158.t1 0.8604888943630135 60 Cpa|evm.model.tig00000217.24 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana tig00000217_g19158.t1 0.8596388154439181 61 Cpa|evm.model.tig00001093.8 tig00001093_g6883.t1 0.8593907013415042 62 Cpa|evm.model.tig00021589.34 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component tig00021589_g22741.t1 0.8592575872461362 63 Cpa|evm.model.tig00000789.34 tig00000789_g4128.t1 0.858821559592605 64 Cpa|evm.model.tig00021589.23 tig00021589_g22731.t1 0.858673731275347 65 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase tig00001049_g6659.t1 0.8580490205104262 81 Cpa|evm.model.tig00001003.42 0.8579571639551401 67 Cpa|evm.model.tig00020554.15 tig00020554_g10801.t1 0.8572676221090382 93 Cpa|evm.model.tig00000842.16 tig00000842_g4836.t1 0.8570787973380616 69 Cpa|evm.model.tig00000382.33 tig00000382_g24565.t1 0.8549677286736644 70 Cpa|evm.model.tig00000863.11 Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica tig00000863_g4965.t1 0.8547130224361648 71 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component tig00000037_g10102.t1 0.854645774198518 72 Cpa|evm.model.tig00021357.3 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN8 component tig00021357_g20736.t1 0.8546441212609028 73 Cpa|evm.model.tig00020675.40 tig00020675_g12624.t1 0.8543371218659913 74 Cpa|evm.model.tig00000388.36 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GRIP-type golgin tig00000388_g24797.t1 0.8541535455595194 75 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component tig00020703_g13111.t1 0.8533562268441435 76 Cpa|evm.model.tig00021319.37 tig00021319_g20231.t1 0.8530261666010812 77 Cpa|evm.model.tig00000037.4 tig00000037_g10071.t1 0.8527738145086937 78 Cpa|evm.model.tig00000692.64 Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica tig00000692_g3263.t1 0.8524389068386399 79 Cpa|evm.model.tig00000037.36 tig00000037_g10104.t1 0.8523977410710719 83 Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 0.8517610073333706 96 Cpa|evm.model.tig00020848.42 tig00020848_g14571.t1 0.8517548296160825 82 Cpa|evm.model.tig00000842.29 tig00000842_g4848.t1 0.8516396177217498 83 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component tig00020538_g10321.t1 0.8516309635774746 84 Cpa|evm.model.tig00021682.8 Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica tig00021682_g23098.t1 0.8507146209215599 86 Cpa|evm.model.tig00001049.11 tig00001049_g6661.t1 0.8503022212431294 87 Cpa|evm.model.tig00021464.26 tig00021464_g21733.t1 0.8497333145165279 88 Cpa|evm.model.tig00020553.162 N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana tig00020553_g10654.t1 0.8485614979696726 90 Cpa|evm.model.tig00000615.61 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor tig00000615_g2590.t1 0.8480135309852502 92 Cpa|evm.model.tig00021464.37 Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica tig00021464_g21743.t1 0.8467718964226163 93 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein tig00001206_g7507.t1 0.8467183028112844 94 Cpa|evm.model.tig00001107.1 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component tig00001107_g7088.t1 0.846173918319107 97 Cpa|evm.model.tig00020603.8 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.RPC34 component tig00020603_g11741.t1 0.8461437688645139 98 Cpa|evm.model.tig00000912.33 tig00000912_g5439.t1 0.8458551746590182 99 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter tig00000194_g14776.t1 0.845518673675454 100