Sequence Description Alias PCC hrr Cpa|evm.model.tig00020903.19 tig00020903_g15087.t1 0.9212713459050814 1 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase tig00000912_g5432.t1 0.8877842690074481 51 Cpa|evm.model.tig00021350.40 tig00021350_g20656.t1 0.8842647018420013 26 Cpa|evm.model.tig00000863.19 ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Physcomitrella patens subsp. patens tig00000863_g4974.t1 0.8833477241544941 5 Cpa|evm.model.tig00001206.18 tig00001206_g7504.t1 0.8829988736727677 25 Cpa|evm.model.tig00021464.26 tig00021464_g21733.t1 0.8826028772969421 8 Cpa|evm.model.tig00000852.36 tig00000852_g5048.t1 0.8823268278348833 9 Cpa|evm.model.tig00021357.26 tig00021357_g20756.t1 0.8807784757464164 60 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor tig00001049_g6664.t1 0.8803942432050269 34 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit tig00000217_g19167.t1 0.8800175181500103 18 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 tig00000704_g3318.t1 0.8719924285524439 72 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit tig00000350_g24327.t1 0.8697598670672568 60 Cpa|evm.model.tig00021357.9 tig00021357_g20742.t1 0.8679866571266258 29 Cpa|evm.model.tig00000076.107 tig00000076_g2405.t1 0.8644251717275392 36 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.8619914248931838 90 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component tig00020703_g13111.t1 0.8616999888079879 50 Cpa|evm.model.tig00000241.134 EH domain-containing protein 2 OS=Arabidopsis thaliana tig00000241_g20999.t1 0.861365372599413 20 Cpa|evm.model.tig00001187.20 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica tig00001187_g7469.t1 0.8610522759626652 60 Cpa|evm.model.tig00021357.29 Protein modification.phosphorylation.SCY1 kinase tig00021357_g20758.t1 0.8601234032409193 22 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica tig00000383_g24645.t1 0.8511468796432115 44 Cpa|evm.model.tig00000704.22 tig00000704_g3312.t1 0.849542867355758 37 Cpa|evm.model.tig00000037.26 tig00000037_g10095.t1 0.8460281000805172 65 Cpa|evm.model.tig00001107.16 0.8429162209788115 30 Cpa|evm.model.tig00020509.16 tig00020509_g9758.t1 0.842201028059722 31 Cpa|evm.model.tig00021464.57 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00021464_g21760.t1 0.8347009079433206 35 Cpa|evm.model.tig00020554.11 Cytoplasmic dynein 2 light intermediate chain 1 OS=Chlamydomonas reinhardtii tig00020554_g10797.t1 0.8339431308528105 99 Cpa|evm.model.tig00000692.13 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-14 motor protein tig00000692_g3207.t1 0.8324695606030799 38 Cpa|evm.model.tig00001718.2 tig00001718_g9581.t1 0.8314431040631997 40 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component tig00000402_g218.t1 0.830309321435421 100 Cpa|evm.model.tig00020918.13 tig00020918_g15890.t1 0.8278620063545545 48 Cpa|evm.model.tig00000076.88 Periodic tryptophan protein 2 OS=Arabidopsis thaliana tig00000076_g2387.t1 0.8266140836410124 52 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana tig00000217_g19158.t1 0.8249636327895059 100 Cpa|evm.model.tig00001027.12 tig00020911_g15757.t1 0.8238751280989927 66 Cpa|evm.model.tig00000388.17 tig00000388_g24779.t1 0.8238435759598792 87 Cpa|evm.model.tig00001107.7 tig00001107_g7093.t1 0.8226442807320211 62 Cpa|evm.model.tig00021357.27 0.8226360528725067 64 Cpa|evm.model.tig00021589.6 tig00021589_g22712.t1 0.8224705261810287 78 Cpa|evm.model.tig00000042.20 tig00000042_g15405.t1 0.8219495776780356 65 Cpa|evm.model.tig00020554.58 VAMP-like protein YKT61 OS=Arabidopsis thaliana tig00020554_g10838.t1 0.8205952449164837 66 Cpa|evm.model.tig00001623.7 ATP-dependent 6-phosphofructokinase 6 OS=Arabidopsis thaliana tig00001623_g9421.t1 0.8198478301654425 97 Cpa|evm.model.tig00022075.34 0.819560606987898 70 Cpa|evm.model.tig00021589.34 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component tig00021589_g22741.t1 0.817545260233438 95 Cpa|evm.model.tig00020553.150 tig00020553_g10641.t1 0.8174396248798759 72 Cpa|evm.model.tig00021108.35 DnaJ protein homolog 2 OS=Allium porrum tig00021108_g18327.t1 0.8172269659365013 73 Cpa|evm.model.tig00000944.33 Peptidyl-prolyl cis-trans isomerase CYP65 OS=Arabidopsis thaliana tig00000944_g5956.t1 0.8163156432215303 85 Cpa|evm.model.tig00000194.41 tig00000194_g14769.t1 0.8108440964034516 82 Cpa|evm.model.tig00000254.68 tig00021098_g18174.t1 0.8105087844563017 83 Cpa|evm.model.tig00000829.20 Protein degradation.ER-associated protein degradation (ERAD) machinery.DFM1 component tig00000829_g4662.t1 0.8087156019735046 84 Cpa|evm.model.tig00020544.3 Cilia- and flagella-associated protein 44 OS=Chlamydomonas reinhardtii tig00001371_g8435.t1 0.8084795396185531 85 Cpa|evm.model.tig00021123.31 tig00021123_g18514.t1 0.8074039358240019 86 Cpa|evm.model.tig00022075.29 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF10 component tig00022075_g23592.t1 0.8069703788207262 88 Cpa|evm.model.tig00020961.111 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.VPS45 regulator protein tig00020961_g16730.t1 0.8062770185640141 91 Cpa|evm.model.tig00020563.191 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component tig00020563_g11392.t1 0.8053027633134177 94 Cpa|evm.model.tig00000402.38 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase tig00000402_g215.t1 0.8050758730580547 98 Cpa|evm.model.tig00000037.35 tig00000037_g10104.t1 0.8044268963135524 97