Sequence Description Alias PCC hrr Cpa|evm.model.tig00000704.50 tig00000704_g3337.t1 0.9316311226850856 5 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component tig00021357_g20735.t1 0.925132929410638 6 Cpa|evm.model.tig00020780.62 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD2 component tig00020780_g13811.t1 0.9249028052107866 6 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.9248834894195855 4 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component tig00021319_g20258.t1 0.9210930885830032 22 Cpa|evm.model.tig00020554.27 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.RBL component tig00020554_g10812.t1 0.916405607853365 6 Cpa|evm.model.tig00021234.20 tig00021234_g19394.t1 0.9148209773261519 7 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.9140140483816955 39 Cpa|evm.model.tig00001093.5 tig00001093_g6880.t1 0.9126067057257169 13 Cpa|evm.model.tig00000980.5 tig00000980_g6130.t1 0.9111059371943668 16 Cpa|evm.model.tig00020531.56 tig00020531_g10062.t1 0.9063405627163046 11 Cpa|evm.model.tig00021537.6 tig00021537_g22261.t1 0.9054657625548131 12 Cpa|evm.model.tig00020538.72 tig00020538_g10378.t1 0.9052505288038829 13 Cpa|evm.model.tig00021319.61 tig00021319_g20254.t1 0.9040655628056226 24 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3326.t1 0.901974773283542 15 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.901907566031882 19 Cpa|evm.model.tig00000692.67 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD1 component tig00000692_g3266.t1 0.8990984610168671 26 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor tig00000829_g4659.t1 0.8976885294137947 27 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.8976802506554178 41 Cpa|evm.model.tig00001049.13 tig00001049_g6663.t1 0.8975938750637197 20 Cpa|evm.model.tig00020553.148 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa subsp. japonica tig00020553_g10639.t1 0.8966383732526139 21 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.8962904212645952 37 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.89475201870284 23 Cpa|evm.model.tig00000144.51 Protein modification.disulfide bond formation.endoplasmic reticulum.thiol-disulfide oxidoreductase (ERO) tig00000144_g9043.t1 0.894113684268624 24 Cpa|evm.model.tig00000704.57 tig00000704_g3343.t1 0.893568421088295 25 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.8926035811664275 49 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.8919926710148347 27 Cpa|evm.model.tig00020780.13 tig00020780_g13765.t1 0.8908438240482278 28 Cpa|evm.model.tig00000037.6 tig00000037_g10073.t1 0.8908315323500093 56 Cpa|evm.model.tig00001424.2 tig00001424_g8701.t1 0.8900280998899811 30 Cpa|evm.model.tig00001029.17 tig00001029_g6416.t1 0.8899336279085285 31 Cpa|evm.model.tig00000241.28 U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana tig00000241_g20886.t1 0.8888317563453421 32 Cpa|evm.model.tig00020539.41 tig00020539_g10434.t1 0.8884968177852165 33 Cpa|evm.model.tig00000402.27 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component tig00000402_g205.t1 0.8884196951875619 34 Cpa|evm.model.tig00000857.6 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.P23 Hsp90-co-chaperone tig00000857_g4927.t1 0.8877894726525345 35 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.8869132632895345 36 Cpa|evm.model.tig00000829.24 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component tig00000829_g4665.t1 0.8860798548749549 37 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00021357_g20757.t1 0.8857136851759595 45 Cpa|evm.model.tig00020904.56 tig00020904_g15188.t1 0.8842693485058893 39 Cpa|evm.model.tig00020554.144 0.8837556104634962 40 Cpa|evm.model.tig00000076.93 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component tig00000076_g2391.t1 0.8831003387955599 41 Cpa|evm.model.tig00000217.29 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst tig00000217_g19163.t1 0.8827459941020266 42 Cpa|evm.model.tig00000980.1 tig00000980_g6126.t1 0.88258337097649 43 Cpa|evm.model.tig00021234.43 0.8820605147354769 44 Cpa|evm.model.tig00001093.2 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase tig00001093_g6877.t1 0.8817600869563375 45 Cpa|evm.model.tig00000319.24 tig00000319_g24137.t1 0.8814695505595177 46 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.8814320412350167 70 Cpa|evm.model.tig00001003.32 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit tig00001003_g6287.t1 0.8811266884976459 48 Cpa|evm.model.tig00000980.9 Intraflagellar transport protein 25 OS=Chlamydomonas reinhardtii tig00000980_g6133.t1 0.8779372113157065 49 Cpa|evm.model.tig00000144.24 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana tig00000144_g9013.t1 0.8775234829560011 50 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.8774097075658164 51 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8767786961072268 73 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor tig00000704_g3350.t1 0.875987462523714 53 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component tig00021348_g20598.t1 0.8747894029333034 54 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component tig00000704_g3335.t1 0.8743309522910113 63 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8722285458450176 66 Cpa|evm.model.tig00000829.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP2-group protein tig00000829_g4660.t1 0.8722022042554516 58 Cpa|evm.model.tig00001085.12 tig00001085_g6953.t1 0.8712176530020765 62 Cpa|evm.model.tig00000079.10 tig00000079_g2798.t1 0.8698320678462204 60 Cpa|evm.model.tig00000203.30 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud13 component tig00000203_g17137.t1 0.8696634384041034 61 Cpa|evm.model.tig00021312.50 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana tig00021312_g20084.t1 0.8686613616779468 62 Cpa|evm.model.tig00000912.4 tig00000912_g5410.t1 0.8681438004159343 63 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 tig00021589_g22717.t1 0.8667199412374357 64 Cpa|evm.model.tig00020903.15 tig00020903_g15083.t1 0.8653481862423207 66 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein tig00001229_g7846.t1 0.8651728294364524 67 Cpa|evm.model.tig00001284.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component tig00001284_g8011.t1 0.863283984232332 77 Cpa|evm.model.tig00001372.2 0.8598191664705862 73 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.8597201239042923 80 Cpa|evm.model.tig00001229.22 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana tig00001229_g7856.t1 0.8587267148079176 75 Cpa|evm.model.tig00000383.37 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia tig00000383_g24647.t1 0.858282138676298 76 Cpa|evm.model.tig00020538.70 tig00020538_g10376.t1 0.8578719435842797 77 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana tig00020544_g10489.t1 0.8577291699370951 78 Cpa|evm.model.tig00020903.45 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.DSS1/Sem1 component tig00020903_g15114.t1 0.85722997437659 79 Cpa|evm.model.tig00000194.28 N-alpha-acetyltransferase MAK3 OS=Arabidopsis thaliana tig00000194_g14754.t1 0.856824436631259 80 Cpa|evm.model.tig00000194.20 tig00000194_g14748.t1 0.8553681167170087 82 Cpa|evm.model.tig00001206.10 Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana tig00001206_g7494.t1 0.8548631877186861 84 Cpa|evm.model.tig00000241.31 tig00000241_g20889.t1 0.8542652888884328 86 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component tig00000944_g5943.t1 0.8528527396987272 91 Cpa|evm.model.tig00000444.11 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.small subunit tig00000444_g801.t1 0.8523648588038049 90 Cpa|evm.model.tig00001424.6 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.PYM component tig00001424_g8705.t1 0.8521001141803441 91 Cpa|evm.model.tig00020848.18 snRNA-activating protein complex subunit OS=Arabidopsis thaliana tig00020848_g14545.t1 0.8485522524251262 93 Cpa|evm.model.tig00000319.30 0.8481552427064529 94 Cpa|evm.model.tig00020554.50 tig00020554_g10832.t1 0.8471071248120151 96 Cpa|evm.model.tig00021589.5 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component tig00021589_g22710.t1 0.8465767642673802 97 Cpa|evm.model.tig00000217.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component tig00000217_g19155.t1 0.8464791804088714 98 Cpa|evm.model.tig00001049.17 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (DCN1) tig00001049_g6666.t1 0.8463409934101143 100