Sequence Description Alias PCC hrr Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9677695538184332 4 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9663337791125567 5 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.964267031487368 3 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.9630845122247016 5 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.9565396360734214 9 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana tig00021579_g22443.t1 0.9543882960699996 6 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9531418313099111 12 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000093_g3534.t1 0.9497376668236988 14 Cpa|evm.model.tig00000551.3 tig00000551_g2024.t1 0.9403146480276434 9 Cpa|evm.model.tig00000248.71 tig00000248_g21830.t1 0.9396812878547492 17 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9353042149090426 11 Cpa|evm.model.tig00000310.32 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000310_g23954.t1 0.9351196890694767 13 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.9339483543063177 34 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.93394733719525 14 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.9315371309007865 18 Cpa|evm.model.tig00001310.4 tig00001310_g8153.t1 0.9309086142851432 21 Cpa|evm.model.tig00001155.24 Protein NCA1 OS=Arabidopsis thaliana tig00001155_g7330.t1 0.9304387283445544 23 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000586_g2256.t1 0.9293956512909768 18 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana tig00000681_g3064.t1 0.9290573171937887 28 Cpa|evm.model.tig00000670.28 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000670_g3045.t1 0.9281408226984234 20 Cpa|evm.model.tig00020560.15 tig00020560_g11080.t1 0.9277942887339098 21 Cpa|evm.model.tig00000480.41 tig00000480_g1309.t1 0.9269312120985135 22 Cpa|evm.model.tig00020553.66 tig00020553_g10555.t1 0.9262975145250801 23 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.92346350527414 24 Cpa|evm.model.tig00000269.112 tig00000269_g23774.t1 0.9229007881083653 25 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.9214249173806185 40 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.9202778794238772 38 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.9194326110420861 28 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.9180379434105983 42 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9154361057416491 44 Cpa|evm.model.tig00021339.48 tig00021339_g20435.t1 0.9154279957801593 31 Cpa|evm.model.tig00020941.39 tig00020941_g16231.t1 0.913603208538839 32 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.9131620198897344 33 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.9126203002147367 62 Cpa|evm.model.tig00021254.2 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor tig00021254_g19677.t1 0.9116957304390197 35 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.9109978244494016 36 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.9104451397952565 51 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.9103027065891046 49 Cpa|evm.model.tig00021358.2 tig00021045_g17649.t1 0.9088954014321642 39 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.9080575036985628 40 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.9077629185751034 49 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.9076634071573175 47 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.906997852002788 53 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.9064634822569991 44 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9047507323087786 67 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.9038999320178531 55 Cpa|evm.model.tig00000478.28 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00000478_g1276.t1 0.9038575828699031 47 Cpa|evm.model.tig00000711.69 DNA repair protein RAD5B OS=Arabidopsis thaliana tig00000711_g3431.t1 0.903193853980949 48 Cpa|evm.model.tig00021582.39 ABC transporter G family member 22 OS=Arabidopsis thaliana tig00021582_g22636.t1 0.9005295783266203 49 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.8994832117994604 56 Cpa|evm.model.tig00000093.172 tig00000093_g3599.t1 0.898340896037648 51 Cpa|evm.model.tig00021680.19 tig00021680_g23041.t1 0.8983200462989919 52 Cpa|evm.model.tig00000402.46 tig00000402_g223.t1 0.8977070772401927 53 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.8975129603010679 69 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.8967003644862976 77 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.895308360900234 69 Cpa|evm.model.tig00021108.20 tig00021108_g18310.t1 0.8949955704404391 57 Cpa|evm.model.tig00000955.10 DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) tig00000955_g5782.t1 0.89436335413431 58 Cpa|evm.model.tig00000553.12 tig00000553_g2082.t1 0.8940917799391429 59 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.8936588433030379 78 Cpa|evm.model.tig00020710.126 tig00020710_g13390.t1 0.891360345464432 61 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.8894885622174469 67 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.8876020992549488 73 Cpa|evm.model.tig00021108.36 External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana tig00021108_g18328.t1 0.8866381407789693 64 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.8858463485521668 68 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.8855377622368853 66 Cpa|evm.model.tig00020553.74 tig00020553_g10564.t1 0.8854430789423616 67 Cpa|evm.model.tig00020952.27 Deoxyribodipyrimidine photo-lyase OS=Oryza sativa subsp. japonica tig00020952_g16501.t1 0.8845457656642892 68 Cpa|evm.model.tig00000391.27 tig00000391_g24860.t1 0.8844902722448887 69 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.8831175621458107 70 Cpa|evm.model.tig00001128.6 tig00001128_g7172.t1 0.8830283251715483 71 Cpa|evm.model.tig00021720.12 tig00021720_g23182.t1 0.88190113652021 73 Cpa|evm.model.tig00020554.147 tig00020554_g10924.t1 0.8817648668083622 74 Cpa|evm.model.tig00021796.8 tig00021796_g23559.t1 0.8814595042211036 75 Cpa|evm.model.tig00020960.66 tig00020960_g16592.t1 0.8786427283217818 76 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.8773132280741193 77 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.8772536559243488 80 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.875833711849585 85 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.8733612727645954 94 Cpa|evm.model.tig00000144.84 tig00000144_g9076.t1 0.872041056458424 82 Cpa|evm.model.tig00021133.3 tig00021133_g18903.t1 0.8710976995602046 83 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8705636084089784 84 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana tig00000823_g4555.t1 0.8704373662376585 85 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.8701209750344668 86 Cpa|evm.model.tig00000215.11 tig00000215_g18540.t1 0.8685265976630886 87 Cpa|evm.model.tig00021332.16 tig00021332_g20335.t1 0.8677358127705563 88 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.867733390231664 89 Cpa|evm.model.tig00021127.153 tig00021127_g18834.t1 0.8663242029237432 90 Cpa|evm.model.tig00021257.6 tig00021257_g19742.t1 0.863569472924951 91 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.863513377560988 92 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.8634758151777113 93 Cpa|evm.model.tig00021680.17 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 69.5) tig00021680_g23039.t1 0.8632033092017155 94 Cpa|evm.model.tig00021135.17 tig00021135_g18938.t1 0.8620110348640568 95 Cpa|evm.model.tig00020911.11 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana tig00020911_g15711.t1 0.8618059732024058 96 Cpa|evm.model.tig00001095.26 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum tig00001095_g7043.t1 0.8614451893896551 97 Cpa|evm.model.tig00020851.8 tig00020851_g14707.t1 0.8609591397812566 98 Cpa|evm.model.tig00021036.46 tig00021036_g17319.t1 0.860199884257134 99 Cpa|evm.model.tig00000142.17 tig00000142_g8652.t1 0.8595507070606528 100