Sequence Description Alias PCC hrr Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component tig00020965_g16836.t1 0.9168747074508927 15 Cpa|evm.model.tig00020589.5 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26 component tig00020589_g11619.t1 0.9155675362843038 10 Cpa|evm.model.tig00020554.80 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component tig00020554_g10859.t1 0.9033064204223565 13 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.9030829642495273 31 Cpa|evm.model.tig00001214.17 tig00001214_g7559.t1 0.9011433968371512 5 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component tig00021435_g21395.t1 0.8988922611419693 8 Cpa|evm.model.tig00000037.19 tig00000037_g10087.t1 0.8982766181186719 7 Cpa|evm.model.tig00020675.2 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein tig00020675_g12580.t1 0.8875650843472316 8 Cpa|evm.model.tig00021319.69 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00021319_g20261.t1 0.8844693030727486 16 Cpa|evm.model.tig00001542.19 tig00001542_g9326.t1 0.8826412950497886 10 Cpa|evm.model.tig00020614.5 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component tig00020614_g12118.t1 0.88244190392217 25 Cpa|evm.model.tig00021435.14 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component tig00021435_g21391.t1 0.8817664692224724 12 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.880749540296609 49 Cpa|evm.model.tig00000204.79 WD repeat-containing protein LWD1 OS=Arabidopsis thaliana tig00000204_g17745.t1 0.8801983032478295 14 Cpa|evm.model.tig00020675.88 Multi-process regulation.programmed cell death.MCP1 metacaspase-like regulator tig00020675_g12670.t1 0.8783632247985125 15 Cpa|evm.model.tig00021314.13 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).USP39 snRNP-associated protein tig00021314_g20123.t1 0.8761822925417314 16 Cpa|evm.model.tig00020903.33 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit tig00020903_g15100.t1 0.8758879687768262 21 Cpa|evm.model.tig00000042.55 tig00000042_g15445.t1 0.8674923167224392 18 Cpa|evm.model.tig00001086.22 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component tig00001086_g6856.t1 0.866759506885417 19 Cpa|evm.model.tig00000388.23 tig00000388_g24784.t1 0.8662185873692216 20 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component tig00001542_g9329.t1 0.8659969007799597 61 Cpa|evm.model.tig00021312.53 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2A large alpha subunit tig00021312_g20087.t1 0.8657457463734242 22 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component tig00021435_g21391.t1 0.8650370223787491 23 Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component tig00000545_g1991.t1 0.8647768286596794 47 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor tig00000383_g24650.t1 0.8626692399084974 38 Cpa|evm.model.tig00020554.44 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component tig00020554_g10827.t1 0.8623007211816088 45 Cpa|evm.model.tig00001600.10 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 314.8) & Triosephosphate isomerase, chloroplastic OS=Secale cereale tig00001600_g9395.t1 0.8605032027986221 40 Cpa|evm.model.tig00000157.60 Ras-related protein RABD1 OS=Arabidopsis thaliana tig00000157_g9647.t1 0.8602721085986154 36 Cpa|evm.model.tig00021348.57 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component tig00021348_g20560.t1 0.8570693542508058 34 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein tig00000144_g9007.t1 0.8560714539514719 47 Cpa|evm.model.tig00000718.71 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).snRNP40/U5-40kDa snRNP component tig00000718_g3743.t1 0.8557241323183636 31 Cpa|evm.model.tig00000388.13 tig00000388_g24776.t1 0.8540375714122562 35 Cpa|evm.model.tig00000459.29 tig00000459_g1095.t1 0.8533563413283657 33 Cpa|evm.model.tig00000480.14 tig00000480_g1298.t1 0.8524764934793122 34 Cpa|evm.model.tig00001098.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component tig00001098_g7056.t1 0.8468050205866511 65 Cpa|evm.model.tig00021591.6 tig00021591_g22792.t1 0.8462997759490357 39 Cpa|evm.model.tig00001428.1 tig00001428_g8718.t1 0.8449505852361168 41 Cpa|evm.model.tig00022075.52 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana tig00022075_g23613.t1 0.8447957379184946 66 Cpa|evm.model.tig00020572.40 tig00020572_g11560.t1 0.8447698210636532 42 Cpa|evm.model.tig00000704.52 Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana tig00000704_g3339.t1 0.8446514626240231 43 Cpa|evm.model.tig00000219.44 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.beta subunit tig00000219_g19483.t1 0.8428789057574566 97 Cpa|evm.model.tig00000944.9 RNA biosynthesis.transcriptional activation.MADS box transcription factor tig00000944_g5931.t1 0.8387131659116227 59 Cpa|evm.model.tig00021489.11 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 430.9) & Serine/threonine-protein kinase AtPK1/AtPK6 OS=Arabidopsis thaliana tig00021489_g21658.t1 0.8372835604544403 52 Cpa|evm.model.tig00000057.79 tig00000057_g100.t1 0.8356004755504753 54 Cpa|evm.model.tig00001376.20 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component tig00001376_g8541.t1 0.8343831063811503 55 Cpa|evm.model.tig00020816.63 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).PRPF3 snRNP-associated protein tig00020816_g14151.t1 0.8307061222281584 100 Cpa|evm.model.tig00000144.7 tig00000144_g8997.t1 0.8297244329353712 58 Cpa|evm.model.tig00000808.7 Solute transport.carrier-mediated transport.DMT superfamily.CLT glutathione transporter tig00000808_g4391.t1 0.8280298496077787 60 Cpa|evm.model.tig00021680.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN4 component tig00021680_g23038.t1 0.8268837226087371 61 Cpa|evm.model.tig00000851.24 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component tig00000851_g4909.t1 0.8262415310213405 63 Cpa|evm.model.tig00000944.2 tig00000944_g5924.t1 0.8261987135260578 64 Cpa|evm.model.tig00001374.6 tig00001374_g8498.t1 0.8254146334957891 85 Cpa|evm.model.tig00001206.4 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 333.7) & Phosphoglycerate kinase 3, cytosolic OS=Arabidopsis thaliana tig00001206_g7487.t1 0.825095416997422 79 Cpa|evm.model.tig00000553.26 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana tig00000553_g2097.t2 0.823868668498027 69 Cpa|evm.model.tig00001042.31 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst tig00001042_g6603.t1 0.8230310022647953 71 Cpa|evm.model.tig00021179.67 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster J phosphatase tig00021179_g19282.t1 0.8223961847644665 75 Cpa|evm.model.tig00000144.109 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF14 component tig00000144_g9102.t1 0.8215709159741638 73 Cpa|evm.model.tig00000851.23 DNA damage-binding protein 1 OS=Solanum lycopersicum tig00000851_g4909.t1 0.8213710410832902 74 Cpa|evm.model.tig00000227.13 tig00000227_g19807.t1 0.821054867700173 75 Cpa|evm.model.tig00020629.20 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit tig00020629_g12339.t1 0.8205185819089269 77 Cpa|evm.model.tig00020912.84 tig00020912_g15852.t1 0.8205087650207358 78 Cpa|evm.model.tig00020816.64 tig00020816_g14152.t1 0.8195434550074834 82 Cpa|evm.model.tig00020610.73 tig00020610_g12017.t1 0.8195171695669305 81 Cpa|evm.model.tig00020780.55 tig00020780_g13804.t1 0.8192924530874062 82 Cpa|evm.model.tig00000663.18 tig00000663_g2951.t1 0.8192673008947591 83 Cpa|evm.model.tig00021432.23 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.beta subunit tig00021432_g21214.t1 0.8184115409214845 84 Cpa|evm.model.tig00020710.117 tig00020710_g13381.t1 0.817905502622479 86 Cpa|evm.model.tig00020564.20 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component tig00020564_g11420.t1 0.8170986455558912 87 Cpa|evm.model.tig00001038.24 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN7 component tig00001038_g6533.t1 0.8168656443757993 89 Cpa|evm.model.tig00000388.62 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.epsilon subunit tig00000388_g24824.t1 0.8162439774705921 90 Cpa|evm.model.tig00020830.11 Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana tig00020830_g14392.t1 0.8158721238930987 91 Cpa|evm.model.tig00000754.29 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.G-class RAB GTPase tig00000754_g3913.t1 0.8151823851435773 94 Cpa|evm.model.tig00021348.33 tig00021348_g20536.t1 0.8144590363775905 98 Cpa|evm.model.tig00020909.37 Protein modification.phosphorylation.NEK kinase tig00020909_g15359.t1 0.8139009173075399 99 Cpa|evm.model.tig00021070.11 tig00021070_g17820.t1 0.8125177441131269 100