Sequence Description Alias PCC hrr Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.966392413558883 5 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9663561334904098 4 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.964267031487368 3 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9591862881119364 8 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000093_g3534.t1 0.9566190223145559 10 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.9541192339017448 8 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.9538589021205507 7 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9531681240141872 11 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.95059309796606 9 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.9487381829147156 10 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.9480756183467774 18 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9472621632965734 12 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.9449442771046204 13 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.9440993300316955 21 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana tig00021579_g22443.t1 0.9437249016765963 15 Cpa|evm.model.tig00001155.24 Protein NCA1 OS=Arabidopsis thaliana tig00001155_g7330.t1 0.9420225643160399 16 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.941577884576322 19 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.9405342971270088 18 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9400425813269967 19 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.9389239227838987 22 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.9386587514218891 21 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.9382519485219042 22 Cpa|evm.model.tig00000551.3 tig00000551_g2024.t1 0.9359405273747419 23 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana tig00000681_g3064.t1 0.9346165725475767 24 Cpa|evm.model.tig00020553.66 tig00020553_g10555.t1 0.932216845865386 25 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.9317604050155944 26 Cpa|evm.model.tig00001310.4 tig00001310_g8153.t1 0.9312652106330321 27 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.930577548028911 29 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.9303982345712676 29 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9300979638037926 30 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.929172853279785 31 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.9288700461564737 34 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9287877227190129 37 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.9281849060798135 34 Cpa|evm.model.tig00000248.71 tig00000248_g21830.t1 0.9274700495570377 35 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.9266756423871271 36 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.925254557182283 37 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.9251970087675186 38 Cpa|evm.model.tig00000269.112 tig00000269_g23774.t1 0.9250252716595702 39 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.9236075954805177 40 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.9229094647861621 41 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.9226805638507207 42 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.9215945727646782 43 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9214975861726821 44 Cpa|evm.model.tig00000093.172 tig00000093_g3599.t1 0.9196462261933693 45 Cpa|evm.model.tig00020941.39 tig00020941_g16231.t1 0.9178383295697461 46 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.916301577099769 47 Cpa|evm.model.tig00020560.15 tig00020560_g11080.t1 0.9142447731515192 48 Cpa|evm.model.tig00000480.41 tig00000480_g1309.t1 0.9120591440122819 49 Cpa|evm.model.tig00021339.48 tig00021339_g20435.t1 0.9109590684594439 50 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.909754093419235 51 Cpa|evm.model.tig00021254.2 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor tig00021254_g19677.t1 0.9094789023477089 52 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.9093660780078587 53 Cpa|evm.model.tig00000310.32 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000310_g23954.t1 0.9080559690550165 54 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9072860624709477 55 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9066855169393023 56 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000586_g2256.t1 0.906539182775754 57 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.906442952309653 58 Cpa|evm.model.tig00020951.45 tig00020951_g16446.t1 0.9057961637656016 59 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.9047573340206393 60 Cpa|evm.model.tig00000391.27 tig00000391_g24860.t1 0.903969637736985 61 Cpa|evm.model.tig00021108.20 tig00021108_g18310.t1 0.9035920247626595 62 Cpa|evm.model.tig00000670.28 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein tig00000670_g3045.t1 0.9034480443564598 63 Cpa|evm.model.tig00000553.12 tig00000553_g2082.t1 0.9023648189102647 64 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9014283593097451 65 Cpa|evm.model.tig00001128.6 tig00001128_g7172.t1 0.9004177665075435 66 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.8990990291846759 67 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.8984450721816559 68 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.8963991232114572 69 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.8952216609193099 70 Cpa|evm.model.tig00000254.128 tig00000254_g22588.t1 0.8950658327915352 71 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.8947570133188524 72 Cpa|evm.model.tig00000402.46 tig00000402_g223.t1 0.8944407187269016 73 Cpa|evm.model.tig00020710.126 tig00020710_g13390.t1 0.8943416513365942 74 Cpa|evm.model.tig00020660.34 tig00020660_g12531.t1 0.8935625101851723 75 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.8932824784247189 76 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.8914524555393648 77 Cpa|evm.model.tig00020710.99 Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris tig00001368_g8404.t1 0.8906554126125846 78 Cpa|evm.model.tig00020553.74 tig00020553_g10564.t1 0.8903359111126721 79 Cpa|evm.model.tig00021358.2 tig00021045_g17649.t1 0.8892648576910215 80 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.8892113752154179 81 Cpa|evm.model.tig00000711.69 DNA repair protein RAD5B OS=Arabidopsis thaliana tig00000711_g3431.t1 0.8887985427492519 82 Cpa|evm.model.tig00000478.28 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00000478_g1276.t1 0.8886947183578 83 Cpa|evm.model.tig00021582.39 ABC transporter G family member 22 OS=Arabidopsis thaliana tig00021582_g22636.t1 0.8879458040016744 84 Cpa|evm.model.tig00000455.54 tig00000455_g1052.t1 0.887871281469111 85 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020660_g12512.t1 0.8876867110329062 86 Cpa|evm.model.tig00000955.10 DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) tig00000955_g5782.t1 0.8873492786563918 87 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.8862202942651771 90 Cpa|evm.model.tig00021680.19 tig00021680_g23041.t1 0.8861814854707625 89 Cpa|evm.model.tig00020960.66 tig00020960_g16592.t1 0.8827667372655824 90 Cpa|evm.model.tig00000980.32 tig00000980_g6160.t1 0.8808719551077875 91 Cpa|evm.model.tig00021133.3 tig00021133_g18903.t1 0.8807933873672845 92 Cpa|evm.model.tig00021108.36 External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana tig00021108_g18328.t1 0.8800616684635476 93 Cpa|evm.model.tig00000344.14 0.8794370332358236 94 Cpa|evm.model.tig00000144.84 tig00000144_g9076.t1 0.8789571020284551 95 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.8788752381824632 96 Cpa|evm.model.tig00000042.43 Histidine kinase 3 OS=Arabidopsis thaliana tig00000042_g15436.t1 0.8780028035890782 97 Cpa|evm.model.tig00021036.46 tig00021036_g17319.t1 0.8775695595566344 98 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.8770645165189498 99 Cpa|evm.model.tig00021531.1 tig00021531_g22162.t1 0.8763989218207608 100