Sequence Description Alias PCC hrr Cpa|evm.model.tig00000829.5 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase tig00000829_g4647.t1 0.9122872576586352 4 Cpa|evm.model.tig00000455.17 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Pisum sativum tig00000455_g1005.t1 0.8935210528273523 2 Cpa|evm.model.tig00021217.9 tig00021217_g19336.t1 0.891076666187312 3 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.878294428803422 41 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor tig00000383_g24650.t1 0.8775900596042219 23 Cpa|evm.model.tig00020909.31 Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana tig00020909_g15353.t1 0.877413721854016 19 Cpa|evm.model.tig00000144.13 tig00000144_g9002.t2 0.8713979273032721 12 Cpa|evm.model.tig00021680.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN4 component tig00021680_g23038.t1 0.8697739771899328 8 Cpa|evm.model.tig00000057.98 tig00000057_g118.t1 0.8659457605612475 9 Cpa|evm.model.tig00020710.117 tig00020710_g13381.t1 0.862959259483134 10 Cpa|evm.model.tig00020554.143 0.8625103544593423 37 Cpa|evm.model.tig00000194.58 Eukaryotic translation initiation factor 3 subunit I OS=Arabidopsis thaliana tig00000194_g14788.t1 0.8601909271965725 35 Cpa|evm.model.tig00000852.40 tig00000852_g5051.t1 0.8582245304690581 16 Cpa|evm.model.tig00020930.28 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica tig00020930_g16037.t1 0.8566301863969626 56 Cpa|evm.model.tig00020629.17 tig00020629_g12336.t1 0.8561988171221971 15 Cpa|evm.model.tig00021680.25 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana tig00021680_g23046.t1 0.8560107808055678 28 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8554937989362268 85 Cpa|evm.model.tig00000842.19 Cell cycle.cytokinesis.phragmoplast microtubule organization.TIO Kinesin-12-regulating kinase tig00000842_g4839.t1 0.8527452465448674 39 Cpa|evm.model.tig00020563.151 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-E component tig00020563_g11353.t1 0.8503125661190484 33 Cpa|evm.model.tig00000388.41 tig00000388_g24801.t1 0.8477237327769173 36 Cpa|evm.model.tig00001408.21 Actin-related protein 6 OS=Oryza sativa subsp. indica tig00001408_g8615.t1 0.8461964903055944 22 Cpa|evm.model.tig00020912.18 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.TFB2-type subunit tig00020912_g15788.t1 0.8447578274550235 23 Cpa|evm.model.tig00020723.17 tig00020723_g13435.t1 0.8442672564828357 24 Cpa|evm.model.tig00020554.44 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component tig00020554_g10827.t1 0.8441873132180997 72 Cpa|evm.model.tig00001501.3 Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica tig00001501_g9219.t1 0.8408224901081599 90 Cpa|evm.model.tig00000955.23 tig00000955_g5798.t1 0.8407924587268468 77 Cpa|evm.model.tig00020610.73 tig00020610_g12017.t1 0.8400093493450789 28 Cpa|evm.model.tig00021489.27 Enzyme classification.EC_6 ligases.EC_6.3 ligase forming carbon-nitrogen bond(50.6.3 : 126.5) & Glutathione synthetase, chloroplastic OS=Solanum lycopersicum tig00021489_g21677.t1 0.8365940261845899 29 Cpa|evm.model.tig00001278.3 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana tig00001278_g7982.t1 0.8357173204818715 30 Cpa|evm.model.tig00000704.52 Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana tig00000704_g3339.t1 0.8341841227419373 57 Cpa|evm.model.tig00020557.18 tig00020557_g11119.t1 0.8337975625866859 33 Cpa|evm.model.tig00020614.107 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).U11/U12-65K snRNP component tig00020614_g12222.t1 0.833627003836177 34 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.8322724935257172 95 Cpa|evm.model.tig00020510.43 tig00020510_g9826.t1 0.8313995729372585 38 Cpa|evm.model.tig00021314.13 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).USP39 snRNP-associated protein tig00021314_g20123.t1 0.8313241165307959 53 Cpa|evm.model.tig00020629.115 tig00020629_g12439.t1 0.8306565063432632 94 Cpa|evm.model.tig00000553.26 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana tig00000553_g2097.t2 0.8306118493422922 40 Cpa|evm.model.tig00000448.17 tig00000448_g849.t1 0.8283113269213466 41 Cpa|evm.model.tig00021608.5 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN1 component tig00021608_g22838.t1 0.8280298496077787 60 Cpa|evm.model.tig00020801.76 tig00020801_g13957.t1 0.8261812157867015 53 Cpa|evm.model.tig00020902.66 tig00020902_g15022.t1 0.8260967485445356 94 Cpa|evm.model.tig00000944.54 tig00000944_g5975.t1 0.8253588193479137 67 Cpa|evm.model.tig00020538.7 tig00020538_g10313.t1 0.8248613320583186 46 Cpa|evm.model.tig00021181.11 tig00021181_g19314.t1 0.8243334045571996 47 Cpa|evm.model.tig00021501.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A1 component tig00021501_g21952.t1 0.8233479018357092 94 Cpa|evm.model.tig00021434.64 tig00021434_g21368.t1 0.8213970017339921 90 Cpa|evm.model.tig00001428.1 tig00001428_g8718.t1 0.8205047235315386 76 Cpa|evm.model.tig00000169.18 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase tig00000169_g11887.t1 0.8198647002536941 54 Cpa|evm.model.tig00000204.79 WD repeat-containing protein LWD1 OS=Arabidopsis thaliana tig00000204_g17745.t1 0.8184283281934619 98 Cpa|evm.model.tig00020610.54 Protein modification.lipidation.Glycophosphatidylinositol (GPI)-anchor addition.GPI pre-assembly.GPI N-acetylglucosamine transferase complex.PIG-P component tig00020610_g11997.t1 0.8176617418043662 56 Cpa|evm.model.tig00021493.29 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 109.8) & 3-phosphoinositide-dependent protein kinase 1 OS=Arabidopsis thaliana tig00021493_g21874.t1 0.8155187907577789 60 Cpa|evm.model.tig00021275.3 tig00021275_g19867.t1 0.8135785966268111 76 Cpa|evm.model.tig00020912.15 0.8111993923205042 69 Cpa|evm.model.tig00001042.31 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst tig00001042_g6603.t1 0.8111574518867665 70 Cpa|evm.model.tig00001003.24 Probable RNA methyltransferase At5g51130 OS=Arabidopsis thaliana tig00001003_g6281.t1 0.8107943175869703 72 Cpa|evm.model.tig00001085.23 UDP-URONIC ACID TRANSPORTER 1 OS=Arabidopsis thaliana tig00001085_g6962.t1 0.8105031697997338 74 Cpa|evm.model.tig00020800.19 tig00020800_g13737.t1 0.8102429613756639 76 Cpa|evm.model.tig00020515.8 tig00020515_g9776.t1 0.8095611305305068 77 Cpa|evm.model.tig00001376.20 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component tig00001376_g8541.t1 0.8093863796208095 91 Cpa|evm.model.tig00001206.19 tig00001206_g7506.t1 0.8092932107977837 79 Cpa|evm.model.tig00020554.116 tig00020554_g10893.t1 0.8074105971452988 82 Cpa|evm.model.tig00000451.18 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.AMSH3 deubiquitinase tig00000451_g975.t1 0.807393837330558 83 Cpa|evm.model.tig00020629.39 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.SRm160 component tig00020629_g12361.t1 0.8073865645253978 84 Cpa|evm.model.tig00000480.15 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS29 component tig00000480_g1299.t1 0.8070526357658542 85 Cpa|evm.model.tig00000459.29 tig00000459_g1095.t1 0.8066896959860828 86 Cpa|evm.model.tig00000881.32 Cytoskeleton.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor tig00000881_g5246.t1 0.8066025569018968 95 Cpa|evm.model.tig00021348.11 tig00021348_g20514.t1 0.806598987967478 89 Cpa|evm.model.tig00021013.37 Protein S-acyltransferase 24 OS=Arabidopsis thaliana tig00021013_g17070.t1 0.8063360727896173 90 Cpa|evm.model.tig00021038.84 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 336.8) & Protein disulfide isomerase-like 1-3 OS=Arabidopsis thaliana tig00021038_g17572.t1 0.8048371478949388 91 Cpa|evm.model.tig00020629.14 tig00020629_g12333.t1 0.8041075827134766 93 Cpa|evm.model.tig00021168.12 COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana tig00021168_g19078.t1 0.8032781564664064 97 Cpa|evm.model.tig00020603.75 Nucleotide metabolism.pyrimidines.salvage pathway.cytidine deaminase tig00020603_g11804.t1 0.8029827154880154 99 Cpa|evm.model.tig00020564.20 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component tig00020564_g11420.t1 0.8023185801472043 100