Sequence Description Alias PCC hrr Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.9084952151016031 6 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component tig00020554_g10917.t1 0.9037425905059747 7 Cpa|evm.model.tig00021348.94 tig00021348_g20601.t1 0.8908957554309778 58 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component tig00020703_g13111.t1 0.8901841437348144 22 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component tig00000402_g218.t1 0.8835124720703237 20 Cpa|evm.model.tig00000704.63 tig00000704_g3347.t1 0.8827705040010936 25 Cpa|evm.model.tig00000944.35 tig00000944_g5958.t1 0.8817818708312876 7 Cpa|evm.model.tig00000203.29 tig00000203_g17136.t1 0.8803136792456437 8 Cpa|evm.model.tig00020903.26 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 37.8) tig00020903_g15093.t1 0.8802483713141226 9 Cpa|evm.model.tig00000128.3 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component tig00000128_g7203.t1 0.8799538051314525 14 Cpa|evm.model.tig00000157.110 Cullin-4 OS=Arabidopsis thaliana tig00000157_g9709.t1 0.8797323469859618 11 Cpa|evm.model.tig00021357.7 tig00021357_g20740.t1 0.8794556479191488 12 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein tig00020553_g10655.t1 0.8781333779427932 41 Cpa|evm.model.tig00000863.11 Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica tig00000863_g4965.t1 0.8777624185371502 23 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase tig00000912_g5432.t1 0.8744989794270164 80 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.873544420023414 69 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein tig00001206_g7507.t1 0.873239580112569 31 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase tig00021319_g20232.t1 0.8704900366732449 57 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component tig00000944_g5945.t1 0.8692093813090296 39 Cpa|evm.model.tig00021319.64 tig00021319_g20256.t1 0.8682638813117146 22 Cpa|evm.model.tig00001229.15 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) tig00001229_g7847.t1 0.8663738903461721 32 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana tig00020554_g10934.t2 0.8652566282604472 50 Cpa|evm.model.tig00021589.23 tig00021589_g22731.t1 0.8632421894517717 28 Cpa|evm.model.tig00020554.114 tig00020554_g10891.t1 0.8630978986419371 32 Cpa|evm.model.tig00001093.6 Synaptotagmin-5 OS=Arabidopsis thaliana tig00001093_g6881.t1 0.8627460736471915 56 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.8626245166931894 93 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica tig00000383_g24645.t1 0.8593084331668258 28 Cpa|evm.model.tig00001466.9 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-7 component tig00001466_g8787.t1 0.8590292530007015 29 Cpa|evm.model.tig00000842.29 tig00000842_g4848.t1 0.8573975669355002 30 Cpa|evm.model.tig00000944.44 tig00000944_g5967.t1 0.8560836407347914 31 Cpa|evm.model.tig00000704.27 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component tig00000704_g3315.t1 0.8558765699253154 32 Cpa|evm.model.tig00001094.1 tig00001094_g6972.t1 0.8536911856686219 34 Cpa|evm.model.tig00001408.7 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.regulatory component (PSY2L) tig00001408_g8602.t1 0.8533847780706576 36 Cpa|evm.model.tig00020592.38 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit tig00020592_g11671.t1 0.8514664783402514 37 Cpa|evm.model.tig00000478.39 tig00000478_g1288.t1 0.8497649511069639 77 Cpa|evm.model.tig00021254.24 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP54 component tig00021254_g19703.t1 0.8496713053502549 53 Cpa|evm.model.tig00001155.26 tig00001155_g7332.t1 0.8483245675356527 41 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit tig00000217_g19167.t1 0.8468790526796758 58 Cpa|evm.model.tig00000217.18 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.ASH2 component tig00000217_g19153.t1 0.8442927275713787 45 Cpa|evm.model.tig00021623.7 tig00021623_g23008.t1 0.8439086309813556 46 Cpa|evm.model.tig00021464.58 tig00021464_g21761.t1 0.8438343432044788 74 Cpa|evm.model.tig00001229.16 Enzyme classification.EC_2 transferases.EC_2.6 transferase transferring nitrogenous group(50.2.6 : 385.6) & Tyrosine aminotransferase OS=Arabidopsis thaliana tig00001229_g7850.t1 0.8436769631871008 48 Cpa|evm.model.tig00000912.6 Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.Pex5 component tig00000912_g5412.t1 0.843570462243127 49 Cpa|evm.model.tig00000852.23 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor tig00000852_g5036.t1 0.8429594600762469 51 Cpa|evm.model.tig00001049.11 tig00001049_g6661.t1 0.8422028786347124 52 Cpa|evm.model.tig00021374.49 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO conjugation E2 enzyme (SCE1) tig00021374_g21132.t1 0.8416568432939274 54 Cpa|evm.model.tig00021464.8 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana tig00021464_g21715.t1 0.8414837936091428 85 Cpa|evm.model.tig00020554.78 Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana tig00020554_g10858.t1 0.8410189376882414 57 Cpa|evm.model.tig00021357.16 tig00021357_g20749.t1 0.8402498033405682 59 Cpa|evm.model.tig00000640.7 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana tig00000640_g2761.t1 0.8395928196709442 63 Cpa|evm.model.tig00000144.11 tig00000144_g9000.t1 0.839459919595212 61 Cpa|evm.model.tig00020684.33 RNA biosynthesis.transcriptional activation.CPP1-like transcription factor tig00020684_g12882.t1 0.8391241798391496 91 Cpa|evm.model.tig00021464.26 tig00021464_g21733.t1 0.8380444813055777 75 Cpa|evm.model.tig00021357.38 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-N-acetylglucosamine synthesis.de novo biosynthesis.glutamine-fructose-6-phosphate aminotransferase tig00021357_g20765.t1 0.8374613193169519 65 Cpa|evm.model.tig00000555.1 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor tig00000555_g2127.t1 0.8367146738728136 67 Cpa|evm.model.tig00021073.11 tig00021073_g18015.t1 0.8357735776324379 69 Cpa|evm.model.tig00020553.152 tig00020553_g10643.t1 0.8351583666299882 88 Cpa|evm.model.tig00020961.111 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.VPS45 regulator protein tig00020961_g16730.t1 0.8344910444665778 72 Cpa|evm.model.tig00020554.162 tig00020554_g10941.t1 0.8340463144900009 73 Cpa|evm.model.tig00000204.43 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase tig00000204_g17710.t1 0.8335174288148799 74 Cpa|evm.model.tig00020848.29 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component tig00020848_g14556.t1 0.8326178474817528 82 Cpa|evm.model.tig00021357.15 tig00021357_g20748.t1 0.8320187755330852 80 Cpa|evm.model.tig00021726.2 CAX-interacting protein 4 OS=Arabidopsis thaliana tig00021726_g23252.t1 0.8318169611873906 81 Cpa|evm.model.tig00000903.41 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component tig00000903_g5533.t1 0.8304722031759639 82 Cpa|evm.model.tig00001486.8 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone tig00001486_g8925.t1 0.828850923807329 87 Cpa|evm.model.tig00000851.24 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component tig00000851_g4909.t1 0.8287517136181611 88 Cpa|evm.model.tig00001029.16 tig00001029_g6414.t1 0.8283369685351699 89 Cpa|evm.model.tig00020703.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase tig00020703_g13121.t1 0.8282248334077466 90 Cpa|evm.model.tig00020537.64 tig00020537_g10289.t1 0.8282016383965805 91 Cpa|evm.model.tig00001278.10 tig00001278_g7989.t1 0.8280516842905672 92 Cpa|evm.model.tig00020961.48 tig00020961_g16670.t1 0.8279034982304875 93 Cpa|evm.model.tig00000912.29 tig00000912_g5434.t1 0.8266043917332896 96 Cpa|evm.model.tig00001154.30 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) tig00001154_g7294.t2 0.8262946349604553 97 Cpa|evm.model.tig00000842.16 tig00000842_g4836.t1 0.8261370048567922 98 Cpa|evm.model.tig00000523.43 Redox homeostasis.low-molecular-weight scavengers.ascorbate biosynthesis.GDP-D-mannose pyrophosphorylase (VTC1) tig00000523_g1864.t1 0.8261163639603548 99 Cpa|evm.model.tig00000865.66 tig00000865_g5115.t1 0.8259669165210239 100