Sequence Description Alias PCC hrr Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.901656611665759 17 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3326.t1 0.901514394596748 8 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.9010277110178068 33 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.8992473578772547 12 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.8924895290848319 22 Cpa|evm.model.tig00020909.31 Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana tig00020909_g15353.t1 0.8921773685533533 12 Cpa|evm.model.tig00000704.52 Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana tig00000704_g3339.t1 0.8869977131124516 7 Cpa|evm.model.tig00000663.16 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm2 component tig00000663_g2949.t1 0.8863913347499477 19 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component tig00000217_g19159.t1 0.8844243803588504 28 Cpa|evm.model.tig00021319.60 tig00021319_g20253.t1 0.8841497154071678 32 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.881209940667023 35 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.8800511288614211 39 Cpa|evm.model.tig00001284.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component tig00001284_g8011.t1 0.8757416585120241 53 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.8756993939785026 54 Cpa|evm.model.tig00020553.139 tig00020553_g10629.t1 0.8746551059355808 39 Cpa|evm.model.tig00000615.55 Cell cycle.mitosis and meiosis.chromatin condensation.condensin I/II complex.CAP-E2/SMC2 component tig00000615_g2585.t1 0.871491439301999 43 Cpa|evm.model.tig00021590.4 tig00021590_g22761.t1 0.8706318449674912 35 Cpa|evm.model.tig00000829.5 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase tig00000829_g4647.t1 0.8705236387675378 29 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.8701548933213278 84 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein tig00000144_g9007.t1 0.8685255984438611 25 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.8683950452741271 58 Cpa|evm.model.tig00020614.39 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.Rad54 chromatin remodeling factor tig00020614_g12152.t1 0.8683606913871726 44 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein tig00000042_g15484.t1 0.8667673810431462 35 Cpa|evm.model.tig00020554.142 NAP1-related protein 2 OS=Oryza sativa subsp. japonica tig00020554_g10921.t1 0.8641942880989081 56 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein tig00001229_g7846.t1 0.8626241097291282 36 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component tig00000912_g5422.t1 0.8622167944035332 75 Cpa|evm.model.tig00000704.65 Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.NUF2 component tig00000704_g3349.t1 0.861823238287044 66 Cpa|evm.model.tig00000157.60 Ras-related protein RABD1 OS=Arabidopsis thaliana tig00000157_g9647.t1 0.8610419582923935 34 Cpa|evm.model.tig00000319.24 tig00000319_g24137.t1 0.8602814699011373 73 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component tig00021612_g22890.t1 0.8600842465372752 76 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component tig00000944_g5943.t1 0.8599547586554598 71 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.8599145669247901 86 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.8590509178312484 80 Cpa|evm.model.tig00000057.98 tig00000057_g118.t1 0.8581210841688403 36 Cpa|evm.model.tig00001093.4 tig00001093_g6879.t1 0.8574461317047146 55 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.8573917143278462 74 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8564484935263652 99 Cpa|evm.model.tig00001234.21 tig00001234_g7743.t1 0.8557449100958308 53 Cpa|evm.model.tig00021127.16 Protein MOTHER of FT and TFL1 homolog 2 OS=Oryza sativa subsp. japonica tig00021127_g18692.t1 0.8554171185824501 42 Cpa|evm.model.tig00000144.51 Protein modification.disulfide bond formation.endoplasmic reticulum.thiol-disulfide oxidoreductase (ERO) tig00000144_g9043.t1 0.8545136345593566 46 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.8542609160377015 98 Cpa|evm.model.tig00001093.3 tig00001093_g6878.t1 0.8529435984971633 47 Cpa|evm.model.tig00000852.40 tig00000852_g5051.t1 0.8525302123831625 48 Cpa|evm.model.tig00001085.1 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-14 motor protein tig00001085_g6942.t1 0.8500320375059449 49 Cpa|evm.model.tig00001229.19 tig00001229_g7852.t1 0.849436643068873 81 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component tig00021435_g21391.t1 0.8464518432486435 54 Cpa|evm.model.tig00020629.39 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.SRm160 component tig00020629_g12361.t1 0.8463726484504338 55 Cpa|evm.model.tig00000704.42 tig00000704_g3329.t1 0.8455919099604451 80 Cpa|evm.model.tig00000076.87 U2 small nuclear ribonucleoprotein B OS=Oryza sativa subsp. indica tig00000076_g2385.t1 0.8429459088637657 84 Cpa|evm.model.tig00021357.30 tig00021357_g20759.t1 0.8404433329685161 69 Cpa|evm.model.tig00001085.15 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP14 component tig00001085_g6955.t1 0.8395786927369175 83 Cpa|evm.model.tig00000037.19 tig00000037_g10087.t1 0.8327919202796732 92 Cpa|evm.model.tig00000754.23 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-D1 component tig00000754_g3906.t1 0.8324055575896707 66 Cpa|evm.model.tig00000076.69 MAR-binding filament-like protein 1 OS=Solanum lycopersicum tig00000076_g2370.t1 0.8301083834451292 69 Cpa|evm.model.tig00001029.19 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B4 component tig00001029_g6418.t1 0.827936209019424 74 Cpa|evm.model.tig00021433.27 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component tig00021433_g21279.t1 0.8273680183955999 77 Cpa|evm.model.tig00001292.18 Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana tig00001292_g8051.t1 0.8272474036181646 78 Cpa|evm.model.tig00000403.64 tig00000403_g323.t1 0.8249203871945033 82 Cpa|evm.model.tig00001206.17 tig00001206_g7502.t1 0.8232503325351792 86 Cpa|evm.model.tig00001206.13 tig00001206_g7498.t1 0.8191665173287204 93 Cpa|evm.model.tig00020610.73 tig00020610_g12017.t1 0.8169901966729614 97