Sequence Description Alias PCC hrr Cpa|evm.model.tig00021348.94 tig00021348_g20601.t1 0.9524964367031373 1 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit tig00000217_g19167.t1 0.93847594523045 2 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000350_g24328.t1 0.9325591579211975 4 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana tig00000241_g20884.t1 0.9233156129527391 4 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component tig00000402_g218.t1 0.9231051967407361 5 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein tig00020553_g10655.t1 0.9122709828572027 10 Cpa|evm.model.tig00001187.20 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica tig00001187_g7469.t1 0.9102829803227488 7 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase tig00000912_g5432.t1 0.9090072439036213 21 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase tig00021319_g20232.t1 0.9075169551616364 9 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.9035520440390692 25 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.9030863363080477 26 Cpa|evm.model.tig00021464.26 tig00021464_g21733.t1 0.9024190989510044 12 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit tig00000789_g4131.t1 0.9004199142229345 13 Cpa|evm.model.tig00001107.6 tig00001107_g7093.t1 0.900246881093044 38 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.8991180653646391 35 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana tig00020554_g10934.t2 0.8978194292856563 16 Cpa|evm.model.tig00020563.191 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component tig00020563_g11392.t1 0.897563337742597 17 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component tig00000350_g24315.t1 0.8971491060802191 21 Cpa|evm.model.tig00021357.9 tig00021357_g20742.t1 0.8968801017055937 19 Cpa|evm.model.tig00001093.6 Synaptotagmin-5 OS=Arabidopsis thaliana tig00001093_g6881.t1 0.8922851860162438 20 Cpa|evm.model.tig00020553.152 tig00020553_g10643.t1 0.8907784864370926 21 Cpa|evm.model.tig00000073.33 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.alpha catalytic subunit tig00000073_g1715.t2 0.8901841437348144 22 Cpa|evm.model.tig00021464.16 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component tig00021464_g21722.t1 0.8898522549379115 23 Cpa|evm.model.tig00021350.40 tig00021350_g20656.t1 0.8889438741574329 24 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii tig00000912_g5414.t1 0.8886079743598145 78 Cpa|evm.model.tig00022075.35 tig00022075_g23597.t1 0.8877179889381165 40 Cpa|evm.model.tig00000944.44 tig00000944_g5967.t1 0.8847313352665208 27 Cpa|evm.model.tig00020848.28 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 170.4) & Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana tig00020848_g14555.t1 0.8838745249948302 33 Cpa|evm.model.tig00000704.70 Intraflagellar transport protein 81 OS=Chlamydomonas reinhardtii tig00000704_g3354.t1 0.8830196125131144 58 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.8828517159546024 37 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit tig00000350_g24327.t1 0.882547270117594 43 Cpa|evm.model.tig00020510.42 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-9 motor protein tig00020510_g9825.t1 0.881061773667502 77 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein tig00001206_g7507.t1 0.8803112612916922 33 Cpa|evm.model.tig00001094.1 tig00001094_g6972.t1 0.8788856185721539 34 Cpa|evm.model.tig00000555.1 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor tig00000555_g2127.t1 0.8763122745986128 35 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana tig00000076_g2403.t1 0.8759235295862448 36 Cpa|evm.model.tig00020848.78 tig00020848_g14607.t1 0.875796842839121 37 Cpa|evm.model.tig00000571.50 tig00000571_g2203.t1 0.8717862123365785 39 Cpa|evm.model.tig00022075.36 Protein RMD5 homolog OS=Arabidopsis thaliana tig00022075_g23598.t1 0.8710374796061923 40 Cpa|evm.model.tig00021350.34 tig00021350_g20651.t1 0.8694679113510441 49 Cpa|evm.model.tig00000852.43 tig00000852_g5052.t1 0.8682744242324864 42 Cpa|evm.model.tig00000478.39 tig00000478_g1288.t1 0.8672466265732561 54 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase tig00000829_g4671.t1 0.8658027596564586 88 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana tig00000217_g19158.t1 0.8636871310701584 47 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.8632228887618212 72 Cpa|evm.model.tig00000615.76 tig00000615_g2606.t1 0.8616999888079879 50 Cpa|evm.model.tig00020592.38 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit tig00020592_g11671.t1 0.861085863374835 51 Cpa|evm.model.tig00021612.56 tig00021612_g22896.t1 0.8605431066452068 67 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana tig00000802_g4296.t1 0.8595976782776117 56 Cpa|evm.model.tig00000852.42 tig00000852_g5051.t1 0.8589491084592508 58 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component tig00001339_g8261.t1 0.856544052064382 88 Cpa|evm.model.tig00020556.73 tig00020556_g11040.t1 0.8555753020418887 63 Cpa|evm.model.tig00000404.26 tig00000404_g389.t1 0.8547643551303531 64 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor tig00000383_g24650.t1 0.8540123358475052 66 Cpa|evm.model.tig00020816.112 tig00020816_g14197.t1 0.8537001631114971 67 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component tig00000944_g5945.t1 0.8533562268441435 76 Cpa|evm.model.tig00000241.181 tig00000241_g21052.t1 0.8513855578331698 93 Cpa|evm.model.tig00020544.6 tig00020544_g10486.t1 0.8512503664334458 72 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component tig00000829_g4645.t1 0.8507126607919857 94 Cpa|evm.model.tig00020723.6 tig00020723_g13425.t1 0.8504266495002596 78 Cpa|evm.model.tig00001107.7 tig00001107_g7093.t1 0.8485396179945403 80 Cpa|evm.model.tig00000704.63 tig00000704_g3347.t1 0.8477281405276248 81 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component tig00020554_g10917.t1 0.8469943223270594 96 Cpa|evm.model.tig00020538.66 tig00020538_g10373.t1 0.8464317245205129 85 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.8459942687078513 87 Cpa|evm.model.tig00020918.13 tig00020918_g15890.t1 0.8459183303432124 88 Cpa|evm.model.tig00020685.15 tig00020685_g12930.t1 0.8452608834047219 89 Cpa|evm.model.tig00020554.78 Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana tig00020554_g10858.t1 0.8438694849146076 92 Cpa|evm.model.tig00000203.29 tig00000203_g17136.t1 0.8437365921135138 93 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter tig00000194_g14776.t1 0.8427420387400316 97 Cpa|evm.model.tig00021036.34 tig00021036_g17306.t1 0.8419860200652363 99 Cpa|evm.model.tig00000042.6 tig00000042_g15393.t1 0.8417381280122551 100