Sequence Description Alias PCC hrr Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.9492066013663241 10 Cpa|evm.model.tig00020614.73 tig00020614_g12187.t1 0.9440055964151436 7 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.9383308029968056 14 Cpa|evm.model.tig00020830.55 tig00020830_g14438.t1 0.9342518176831363 8 Cpa|evm.model.tig00000796.16 tig00000796_g4238.t1 0.9326453768232457 5 Cpa|evm.model.tig00000342.56 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.MPBQ methyltransferase (VTE3) tig00000342_g24240.t1 0.9284035599899392 6 Cpa|evm.model.tig00000403.33 tig00000403_g289.t1 0.9252610625427449 7 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9249681818030142 34 Cpa|evm.model.tig00021179.40 Carotenoid cleavage dioxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica tig00021179_g19254.t1 0.9229807643429563 12 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.9211815111832333 17 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.9191281061472584 20 Cpa|evm.model.tig00000981.5 tig00000981_g5860.t1 0.9157454123986962 12 Cpa|evm.model.tig00000718.2 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.9150058186098822 13 Cpa|evm.model.tig00020952.7 ABC transporter B family member 2 OS=Arabidopsis thaliana tig00020952_g16473.t1 0.914200274139216 14 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.9115271756082469 15 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.908376437882313 62 Cpa|evm.model.tig00000391.2 DNA damage response.DNA repair mechanisms.photoreactivation.6-4-type photolyase (UVR3) tig00000391_g24833.t1 0.9079834634875509 17 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.9072430149061758 44 Cpa|evm.model.tig00000980.32 tig00000980_g6160.t1 0.9047856054742175 19 Cpa|evm.model.tig00000889.39 tig00000889_g5332.t1 0.9045000349445791 23 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.9029702528518702 32 Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.900458932431877 41 Cpa|evm.model.tig00000802.18 tig00000802_g4269.t1 0.9004231046059182 23 Cpa|evm.model.tig00001729.6 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter tig00001729_g9740.t1 0.8996688799278632 24 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8986886789538123 25 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.8986542890616948 62 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana tig00020592_g11633.t1 0.8972955163250058 39 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8971385872197756 46 Cpa|evm.model.tig00001065.21 tig00001065_g6722.t1 0.895991830809636 29 Cpa|evm.model.tig00000718.3 ABC transporter C family member 6 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8956647990471388 30 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.8899285042959584 72 Cpa|evm.model.tig00020941.46 tig00020941_g16238.t1 0.8893646116812264 32 Cpa|evm.model.tig00000076.165 tig00000076_g2456.t1 0.8890170918667926 33 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.8887713763045669 56 Cpa|evm.model.tig00020592.44 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020592_g11677.t1 0.8886360149276569 35 Cpa|evm.model.tig00000718.1 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8870725416515003 36 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.8829958159125672 70 Cpa|evm.model.tig00021350.15 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica tig00021350_g20632.t1 0.8816642103952229 38 Cpa|evm.model.tig00001093.1 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana tig00001093_g6876.t1 0.8803054218390831 39 Cpa|evm.model.tig00000912.22 Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana tig00000912_g5427.t1 0.8800256980790918 40 Cpa|evm.model.tig00000073.69 tig00000073_g1752.t1 0.8800227995199079 41 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.8797907885228757 42 Cpa|evm.model.tig00001024.2 ABC transporter C family member 14 OS=Arabidopsis thaliana tig00001729_g9740.t1 0.8795482916921463 43 Cpa|evm.model.tig00021318.57 Lipid metabolism.lipid transport.phospholipid transverse translocation.scramblase tig00021318_g20178.t1 0.8789849022465878 44 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca tig00000863_g5002.t1 0.8788152492570441 45 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.8787780327248061 82 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.8773311402275956 81 Cpa|evm.model.tig00000093.128 tig00000093_g3556.t1 0.8754358461954204 55 Cpa|evm.model.tig00000882.20 tig00000882_g5265.t1 0.8751237080921553 49 Cpa|evm.model.tig00000498.41 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase tig00000498_g1616.t1 0.8747711640208892 50 Cpa|evm.model.tig00021501.21 tig00021501_g21959.t1 0.8742944216277635 52 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.8741958455433558 53 Cpa|evm.model.tig00021318.25 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor tig00021318_g20145.t1 0.8723003915696868 54 Cpa|evm.model.tig00000342.41 tig00000342_g24225.t1 0.8712312513014645 55 Cpa|evm.model.tig00001229.8 tig00001229_g7840.t1 0.8707912994756976 56 Cpa|evm.model.tig00021373.7 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase tig00021373_g21074.t1 0.8701896904365469 57 Cpa|evm.model.tig00000981.19 tig00000981_g5873.t1 0.8673674660711476 58 Cpa|evm.model.tig00001269.6 tig00001269_g7977.t1 0.8667950337402472 59 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor tig00020943_g16313.t1 0.8638774466363106 60 Cpa|evm.model.tig00000900.16 Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana tig00000900_g5370.t1 0.8611164050473565 61 Cpa|evm.model.tig00001525.4 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00001525_g9233.t1 0.8606678849610887 62 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.8600291494239072 75 Cpa|evm.model.tig00000403.95 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 99.4) & Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana tig00000403_g355.t1 0.8573787552118423 64 Cpa|evm.model.tig00020629.149 tig00020629_g12480.t1 0.8537852741104629 66 Cpa|evm.model.tig00020943.67 Enzyme classification.EC_1 oxidoreductases.EC_1.6 oxidoreductase acting on NADH or NADPH(50.1.6 : 384.6) & NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana tig00020943_g16307.t1 0.85333302634652 67 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.8531312314736119 83 Cpa|evm.model.tig00020848.14 tig00020848_g14540.t1 0.8515268265749674 78 Cpa|evm.model.tig00021432.52 tig00021432_g21244.t1 0.8508405627613086 70 Cpa|evm.model.tig00000630.10 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase tig00000630_g2688.t1 0.8491216596717168 73 Cpa|evm.model.tig00020675.1 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase tig00020675_g12579.t1 0.8480414539205764 74 Cpa|evm.model.tig00000055.1 tig00000055_g20101.t1 0.8471203722360533 76 Cpa|evm.model.tig00021616.18 tig00021616_g22923.t1 0.8455537293624011 93 Cpa|evm.model.tig00000821.11 tig00000821_g4470.t1 0.8454173829692544 79 Cpa|evm.model.tig00001576.15 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase tig00001576_g9370.t1 0.8448404791532798 81 Cpa|evm.model.tig00021357.42 tig00021357_g20768.t1 0.8411406737678889 85 Cpa|evm.model.tig00000754.3 tig00000754_g3886.t1 0.8407651689938183 86 Cpa|evm.model.tig00000142.17 tig00000142_g8652.t1 0.8396536279772775 88 Cpa|evm.model.tig00000219.51 Protein translocase subunit SecA, chloroplastic OS=Ostreococcus lucimarinus (strain CCE9901) tig00000219_g19490.t1 0.8389837947099328 89 Cpa|evm.model.tig00020553.191 ABC transporter C family member 11 OS=Arabidopsis thaliana tig00020553_g10681.t1 0.8389228343289137 90 Cpa|evm.model.tig00021314.19 tig00021314_g20129.t1 0.8382121867922255 91 Cpa|evm.model.tig00020538.64 tig00020538_g10371.t1 0.8371335142319728 92 Cpa|evm.model.tig00000219.43 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase tig00000219_g19482.t1 0.8370703388393951 93 Cpa|evm.model.tig00000076.24 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-E1 component tig00000076_g2322.t1 0.835841561695634 94 Cpa|evm.model.tig00001408.12 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic glucanotransferase tig00001408_g8607.t1 0.8347222276486677 97 Cpa|evm.model.tig00021179.81 tig00021179_g19298.t1 0.8336118692192229 99