Sequence Description Alias PCC hrr Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.9746962751135859 1 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.9602716388164371 5 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.944116656185752 6 Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.93968465976105 24 Cpa|evm.model.tig00000889.39 tig00000889_g5332.t1 0.9396239017738058 5 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9390289959589917 18 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9373596809022214 10 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.9305438278190956 21 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.928639643036206 19 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor tig00020943_g16313.t1 0.9285164299351616 10 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.9271428596400243 12 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.9267269699494292 12 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.9262422947782495 16 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.9260473624756606 15 Cpa|evm.model.tig00021464.19 tig00021464_g21725.t1 0.9244226817512221 15 Cpa|evm.model.tig00020614.73 tig00020614_g12187.t1 0.9236003390281973 16 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.9198412325446148 17 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.9173052142683059 18 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.9163385581901493 30 Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.9156975662741696 24 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.9134454270982126 38 Cpa|evm.model.tig00021127.107 Redox homeostasis.low-molecular-weight scavengers.ascorbate biosynthesis.L-galactose dehydrogenase tig00021127_g18789.t1 0.9130516517688285 22 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.9118302464610987 27 Cpa|evm.model.tig00021017.25 tig00021017_g17199.t1 0.9106089500487333 24 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9096666201583568 56 Cpa|evm.model.tig00000042.43 Histidine kinase 3 OS=Arabidopsis thaliana tig00000042_g15436.t1 0.90929717537708 26 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9062456669794974 65 Cpa|evm.model.tig00021179.40 Carotenoid cleavage dioxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica tig00021179_g19254.t1 0.9059831879750683 28 Cpa|evm.model.tig00000361.1 tig00000361_g24355.t1 0.9055184354608852 29 Cpa|evm.model.tig00020629.149 tig00020629_g12480.t1 0.9052496195166498 30 Cpa|evm.model.tig00001729.6 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter tig00001729_g9740.t1 0.9026022964882066 31 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.9018991625745831 47 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.901712402654803 84 Cpa|evm.model.tig00021035.15 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00021035_g17247.t1 0.9010871704979557 34 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9008484408355169 77 Cpa|evm.model.tig00000073.69 tig00000073_g1752.t1 0.8996608678575455 36 Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.8990675134552103 44 Cpa|evm.model.tig00000760.8 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000760_g3929.t1 0.898792614915259 38 Cpa|evm.model.tig00000219.71 Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana tig00000219_g19507.t1 0.8972955163250058 39 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.8972464325925192 40 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.8961680392324013 66 Cpa|evm.model.tig00021350.15 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica tig00021350_g20632.t1 0.8961463946636503 42 Cpa|evm.model.tig00000718.2 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.892775414129284 43 Cpa|evm.model.tig00000760.1 tig00000760_g3923.t1 0.892381063682426 44 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.8920363240581088 45 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.8912635236285579 58 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.8909008838287574 86 Cpa|evm.model.tig00001532.3 tig00001532_g9269.t1 0.8906641416222078 48 Cpa|evm.model.tig00000981.5 tig00000981_g5860.t1 0.8900538580778047 49 Cpa|evm.model.tig00000459.97 tig00000459_g1161.t1 0.8891568341011582 50 Cpa|evm.model.tig00000718.1 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8890960805831113 51 Cpa|evm.model.tig00001086.15 tig00001086_g6850.t1 0.8888636047818322 53 Cpa|evm.model.tig00020554.48 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC10 component tig00020554_g10831.t1 0.8874802074702176 53 Cpa|evm.model.tig00001024.2 ABC transporter C family member 14 OS=Arabidopsis thaliana tig00001729_g9740.t1 0.8866234679679827 54 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.8852568727684136 95 Cpa|evm.model.tig00001376.11 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcdA component tig00001376_g8532.t1 0.8849844945250895 56 Cpa|evm.model.tig00001065.21 tig00001065_g6722.t1 0.8846882294614106 57 Cpa|evm.model.tig00020952.7 ABC transporter B family member 2 OS=Arabidopsis thaliana tig00020952_g16473.t1 0.8846565083171936 58 Cpa|evm.model.tig00000361.74 tig00000361_g24426.t1 0.8843888721183412 59 Cpa|evm.model.tig00001095.9 Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana tig00001095_g7025.t1 0.8835393309340993 60 Cpa|evm.model.tig00000802.18 tig00000802_g4269.t1 0.8824813770979772 61 Cpa|evm.model.tig00021126.3 ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana tig00021126_g18456.t1 0.8824044611670617 62 Cpa|evm.model.tig00021126.20 Coenzyme metabolism.FMN/FAD biosynthesis.FMN hydrolase tig00021126_g18469.t1 0.8821581460486116 63 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.8821218204709873 64 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.8807882251856687 65 Cpa|evm.model.tig00000553.47 tig00000553_g2121.t1 0.8804630999038959 66 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.8802100957906351 71 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.8780858405549175 89 Cpa|evm.model.tig00000821.11 tig00000821_g4470.t1 0.8774708750107308 69 Cpa|evm.model.tig00021127.82 Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana tig00021127_g18759.t1 0.8770637388582534 70 Cpa|evm.model.tig00000076.165 tig00000076_g2456.t1 0.8747783359423339 71 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.8741593744431204 98 Cpa|evm.model.tig00000204.70 tig00000204_g17737.t1 0.8740006786728696 73 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.8739851002436282 86 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.8736091861169345 75 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca tig00000863_g5002.t1 0.8734356798576156 76 Cpa|evm.model.tig00001629.4 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.Z-ISO zeta-carotene isomerase tig00001629_g9520.t1 0.8724207324921579 77 Cpa|evm.model.tig00000254.123 tig00000254_g22583.t1 0.8722426974912545 78 Cpa|evm.model.tig00000718.3 ABC transporter C family member 6 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.8718762284994078 79 Cpa|evm.model.tig00000981.18 tig00000981_g5872.t1 0.8716724583545418 80 Cpa|evm.model.tig00000900.16 Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana tig00000900_g5370.t1 0.8705573025458262 81 Cpa|evm.model.tig00021179.81 tig00021179_g19298.t1 0.870344035853565 82 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.8697697440561254 83 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.8686783805934088 85 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.8675172215806044 96 Cpa|evm.model.tig00000981.19 tig00000981_g5873.t1 0.8674382605606656 87 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.8667927469855926 89 Cpa|evm.model.tig00021582.39 ABC transporter G family member 22 OS=Arabidopsis thaliana tig00021582_g22636.t1 0.8666393229093655 90 Cpa|evm.model.tig00020660.34 tig00020660_g12531.t1 0.8657893214082159 91 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8635084479489261 93 Cpa|evm.model.tig00000980.32 tig00000980_g6160.t1 0.862469803889927 94 Cpa|evm.model.tig00000403.95 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 99.4) & Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana tig00000403_g355.t1 0.8623483942468024 95 Cpa|evm.model.tig00000391.2 DNA damage response.DNA repair mechanisms.photoreactivation.6-4-type photolyase (UVR3) tig00000391_g24833.t1 0.862159265622413 96 Cpa|evm.model.tig00020943.67 Enzyme classification.EC_1 oxidoreductases.EC_1.6 oxidoreductase acting on NADH or NADPH(50.1.6 : 384.6) & NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana tig00020943_g16307.t1 0.861707049364161 98 Cpa|evm.model.tig00021352.9 tig00021352_g20677.t1 0.8609262520411635 99 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.8604496806443755 100