Sequence Description Alias PCC hrr Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.938855853182688 6 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component tig00000792_g4177.t1 0.9211567045566577 12 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component tig00000808_g4429.t1 0.918816226225495 10 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component tig00001542_g9329.t1 0.9172148333173104 13 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component tig00020903_g15104.t1 0.9155054614425442 5 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.9119625993658812 7 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana tig00020684_g12880.t1 0.9097926571084491 8 Cpa|evm.model.tig00000219.44 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.beta subunit tig00000219_g19483.t1 0.9063788686592537 8 Cpa|evm.model.tig00021179.67 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster J phosphatase tig00021179_g19282.t1 0.9044090854009897 9 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.9028990096085535 49 Cpa|evm.model.tig00020934.50 tig00020934_g16118.t1 0.9027408637214211 11 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component tig00001339_g8261.t1 0.9013400736271976 19 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.9000352722306679 41 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana tig00021357_g20766.t1 0.8976327635458674 28 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.8976054042556111 73 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.8962050133180186 57 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.8955902234237367 36 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.8953301836543133 45 Cpa|evm.model.tig00021326.40 tig00021326_g20304.t1 0.8947260208392989 19 Cpa|evm.model.tig00000944.23 Protein degradation.peptide tagging.Homologous-to-Ubiquitin (HUB)-anchor addition.HUB ubiquitin-fold protein tig00000944_g5946.t1 0.8926378485910261 20 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.8911561774456566 63 Cpa|evm.model.tig00000944.19 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-F component tig00000944_g5941.t1 0.8905862122880652 22 Cpa|evm.model.tig00000704.42 tig00000704_g3329.t1 0.8899679652727707 23 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase tig00001107_g7096.t1 0.8898183278521096 43 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.8891476090793738 40 Cpa|evm.model.tig00021612.39 tig00021612_g22881.t1 0.8880541242044455 26 Cpa|evm.model.tig00000144.125 Calcineurin B-like protein 2 OS=Arabidopsis thaliana tig00000144_g9120.t1 0.8877703216731371 27 Cpa|evm.model.tig00001160.15 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component tig00001160_g7349.t1 0.8877386665057369 28 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8872937404023294 29 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.8858575358054012 30 Cpa|evm.model.tig00020554.32 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1A PIC assembly factor tig00020554_g10817.t1 0.8855683863940712 31 Cpa|evm.model.tig00020684.43 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component tig00020684_g12891.t1 0.8846460911296625 32 Cpa|evm.model.tig00000480.14 tig00000480_g1298.t1 0.884236295973218 33 Cpa|evm.model.tig00000042.7 tig00000042_g15394.t1 0.8838617167049299 34 Cpa|evm.model.tig00000157.60 Ras-related protein RABD1 OS=Arabidopsis thaliana tig00000157_g9647.t1 0.8818889154587337 35 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.8818778402435291 36 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.8814872408874719 57 Cpa|evm.model.tig00000912.18 tig00000912_g5423.t1 0.881042667714987 57 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.8805038754046832 39 Cpa|evm.model.tig00000241.145 tig00000241_g21010.t1 0.8793668092728574 40 Cpa|evm.model.tig00000203.22 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate reductase tig00000203_g17127.t1 0.8792399467428264 41 Cpa|evm.model.tig00021351.15 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component tig00021352_g20674.t1 0.8781124282396452 42 Cpa|evm.model.tig00021352.44 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana tig00021352_g20712.t1 0.8768826380575024 43 Cpa|evm.model.tig00000663.16 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm2 component tig00000663_g2949.t1 0.8765163537711621 44 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component tig00021435_g21395.t1 0.8764223703970017 45 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase tig00001234_g7732.t1 0.8763015822450783 74 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.875324429960417 74 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component tig00022075_g23612.t1 0.8742984245640214 48 Cpa|evm.model.tig00001333.27 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component tig00001333_g8197.t1 0.8740229722414643 49 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.873816905634309 81 Cpa|evm.model.tig00000241.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF3 component tig00000241_g20883.t1 0.8737561269594 51 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.8736799880763272 53 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana tig00000704_g3341.t1 0.8735663761859785 53 Cpa|evm.model.tig00001428.10 tig00001428_g8729.t1 0.8732857747822095 54 Cpa|evm.model.tig00000444.11 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.small subunit tig00000444_g801.t1 0.8730767130725561 55 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.873075574530931 61 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.8724623475411839 57 Cpa|evm.model.tig00021319.68 tig00021319_g20260.t1 0.8722188729530934 58 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.8713192858358657 69 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein tig00000144_g9007.t1 0.8704219029061964 60 Cpa|evm.model.tig00020553.139 tig00020553_g10629.t1 0.8701636191712491 61 Cpa|evm.model.tig00001085.15 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP14 component tig00001085_g6955.t1 0.8701502675143189 62 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.8698004607804739 98 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein tig00000042_g15484.t1 0.8694724113767774 65 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.8691576133298973 66 Cpa|evm.model.tig00001600.14 tig00001600_g9399.t1 0.8683257620734964 71 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.8683202821765368 83 Cpa|evm.model.tig00001049.13 tig00001049_g6663.t1 0.8675085721495169 71 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.8667700629742434 73 Cpa|evm.model.tig00021043.13 tig00021043_g17622.t1 0.8666540182921372 74 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.8666360847083708 96 Cpa|evm.model.tig00021612.51 tig00021612_g22891.t1 0.8661056518743043 76 Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component tig00020965_g16836.t1 0.8658156055994536 77 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.8655834642625753 78 Cpa|evm.model.tig00021612.34 tig00021612_g22877.t1 0.8655388331793618 79 Cpa|evm.model.tig00001284.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component tig00001284_g8011.t1 0.8654048419907333 80 Cpa|evm.model.tig00000037.37 Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate dehydratase tig00000037_g10105.t1 0.8639118803111812 81 Cpa|evm.model.tig00000970.2 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 82.2) tig00000970_g5824.t1 0.8638155226421137 82 Cpa|evm.model.tig00021123.29 tig00021123_g18513.t1 0.8636635725254933 83 Cpa|evm.model.tig00001590.1 tig00001590_g9373.t1 0.8632261617322725 85 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.8630290634128298 86 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.8629616738186124 87 Cpa|evm.model.tig00020538.71 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component tig00020538_g10377.t1 0.8620933433129578 88 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component tig00020538_g10321.t1 0.8614715122625273 90 Cpa|evm.model.tig00000076.52 tig00000076_g2352.t1 0.8603834142717196 93 Cpa|evm.model.tig00000241.116 tig00000241_g20982.t1 0.8593114322832227 92 Cpa|evm.model.tig00000383.54 Uncharacterized protein At2g34160 OS=Arabidopsis thaliana tig00000383_g24668.t1 0.8590768410637676 93 Cpa|evm.model.tig00000525.12 Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus tig00000525_g1955.t1 0.8588991881154229 94 Cpa|evm.model.tig00020556.31 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase tig00020556_g10999.t1 0.8586303390579305 95 Cpa|evm.model.tig00021290.10 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.MAD2 checkpoint protein tig00021290_g19972.t1 0.858350408205084 96 Cpa|evm.model.tig00000402.13 Kinesin-like protein KIN-1 OS=Arabidopsis thaliana tig00000402_g191.t1 0.8577817279721052 97 Cpa|evm.model.tig00000842.36 tig00000842_g4855.t1 0.8574659770268163 98 Cpa|evm.model.tig00021435.47 Calmodulin OS=Mougeotia scalaris tig00021435_g21427.t1 0.8570263615172833 99 Cpa|evm.model.tig00000754.29 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.G-class RAB GTPase tig00000754_g3913.t1 0.856898018332376 100