Sequence Description Alias PCC hrr Cpa|evm.model.tig00000711.7 Protein biosynthesis.aminoacyl-tRNA synthetase activities.arginine-tRNA ligase tig00000711_g3368.t1 0.9407638462576006 1 Cpa|evm.model.tig00000194.35 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana tig00000194_g14763.t1 0.9199582291693856 2 Cpa|evm.model.tig00000367.42 tig00000367_g24479.t1 0.9095908650009943 3 Cpa|evm.model.tig00000718.40 tig00000718_g3715.t1 0.9021974301363608 4 Cpa|evm.model.tig00000471.12 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase tig00000471_g1187.t1 0.9001914354655665 5 Cpa|evm.model.tig00020554.34 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.bifunctional homoserine dehydrogenase and aspartate kinase tig00020554_g10819.t1 0.8821836131849958 6 Cpa|evm.model.tig00000140.10 Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana tig00000140_g8469.t1 0.8778518733492194 9 Cpa|evm.model.tig00021464.7 tig00021464_g21714.t1 0.8761998109703563 8 Cpa|evm.model.tig00000140.11 tig00000140_g8469.t1 0.873440670232505 9 Cpa|evm.model.tig00000711.39 tig00000711_g3402.t1 0.8653325076652895 23 Cpa|evm.model.tig00020830.3 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component tig00020830_g14385.t1 0.8625079000328733 21 Cpa|evm.model.tig00000042.159 tig00000042_g15556.t1 0.8509560550059698 12 Cpa|evm.model.tig00020537.19 Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum tig00020537_g10241.t1 0.8497202936315565 23 Cpa|evm.model.tig00000863.21 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase tig00000863_g4976.t1 0.8454317523008913 20 Cpa|evm.model.tig00020562.40 Probable transcriptional regulatory protein At2g25830 OS=Arabidopsis thaliana tig00020562_g11165.t1 0.8440575897752974 15 Cpa|evm.model.tig00020904.57 Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond(50.6.1 : 992.0) & Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana tig00020904_g15189.t1 0.8379915262775828 33 Cpa|evm.model.tig00000471.15 Lipid metabolism.glycerolipid synthesis.phosphatidylcholine.acyl-CoA:lysophosphatidylcholine acyltransferase tig00000471_g1190.t1 0.8357256640724096 48 Cpa|evm.model.tig00000241.50 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase tig00000241_g20912.t1 0.8353987672993334 18 Cpa|evm.model.tig00000863.22 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group(50.2.5 : 129.8) & Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica tig00000863_g4976.t1 0.8320000206742775 19 Cpa|evm.model.tig00000507.35 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 0.8303569469943538 20 Cpa|evm.model.tig00000093.206 tig00000093_g3633.t1 0.8227760787797939 35 Cpa|evm.model.tig00021319.44 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic22 component tig00021319_g20238.t1 0.822581193135173 22 Cpa|evm.model.tig00021464.56 Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana tig00021464_g21759.t1 0.8178015162162315 23 Cpa|evm.model.tig00001304.8 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor tig00001304_g8110.t1 0.8161422955236207 42 Cpa|evm.model.tig00021319.48 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase tig00021319_g20242.t1 0.8159051346122818 25 Cpa|evm.model.tig00001408.9 NADH--cytochrome b5 reductase 1 OS=Arabidopsis thaliana tig00001408_g8604.t1 0.815020060565565 58 Cpa|evm.model.tig00001333.23 tig00001333_g8193.t1 0.8142401541074239 27 Cpa|evm.model.tig00000142.3 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component tig00000142_g8639.t1 0.813579745044452 51 Cpa|evm.model.tig00020912.99 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-gamma tig00020912_g15866.t1 0.8122050378513026 45 Cpa|evm.model.tig00022075.67 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase tig00022075_g23630.t1 0.8091306260863911 56 Cpa|evm.model.tig00001420.2 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component tig00001420_g8689.t1 0.8087255566121951 31 Cpa|evm.model.tig00001384.1 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase tig00001384_g8550.t1 0.8072439418459191 68 Cpa|evm.model.tig00020965.5 tig00020965_g16824.t1 0.8056160613269743 52 Cpa|evm.model.tig00000135.5 Probable protein S-acyltransferase 16 OS=Arabidopsis thaliana tig00000135_g7971.t1 0.8046214191172818 34 Cpa|evm.model.tig00000403.11 tig00000403_g265.t1 0.800494079176602 35 Cpa|evm.model.tig00001154.8 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase tig00001154_g7271.t1 0.80018137744921 36 Cpa|evm.model.tig00021179.44 tig00021179_g19258.t1 0.7995774426366652 37 Cpa|evm.model.tig00021720.10 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.threonine.threonine synthase tig00021720_g23180.t1 0.7988592326262 56 Cpa|evm.model.tig00000711.67 Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana tig00000711_g3429.t1 0.7988170740870709 53 Cpa|evm.model.tig00000553.11 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase tig00000553_g2081.t1 0.7982189784375178 40 Cpa|evm.model.tig00000342.59 tig00000342_g24244.t1 0.7946787773672721 41 Cpa|evm.model.tig00021517.10 Protein biosynthesis.translation termination.ribosome recycling factor (RLI/ABCE) tig00021517_g21995.t1 0.7945487264068641 98 Cpa|evm.model.tig00001164.1 tig00001164_g7392.t1 0.7917922031463736 43 Cpa|evm.model.tig00021127.40 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor tig00021127_g18717.t1 0.7916910688735194 64 Cpa|evm.model.tig00001388.6 Nucleotide metabolism.deoxynucleotide metabolism.nucleoside diphosphate kinase tig00001388_g8576.t1 0.7883433529150671 45 Cpa|evm.model.tig00000241.13 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component tig00000241_g20872.t1 0.7861373293097659 46 Cpa|evm.model.tig00020904.166 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.KVAG phosphometabolite transporter tig00020904_g15288.t2 0.7834722147805911 69 Cpa|evm.model.tig00020554.35 tig00020554_g10819.t1 0.7817046427251616 48 Cpa|evm.model.tig00020734.25 DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana tig00020734_g13581.t1 0.7775501141176223 50 Cpa|evm.model.tig00000056.32 tig00000056_g24079.t1 0.7761898024619747 51 Cpa|evm.model.tig00020614.28 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana tig00020614_g12138.t1 0.7759205018981384 74 Cpa|evm.model.tig00021621.10 tig00021621_g22966.t1 0.7739097069076715 58 Cpa|evm.model.tig00022075.15 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3l component tig00022075_g23578.t1 0.7727484961135405 76 Cpa|evm.model.tig00000383.110 tig00000383_g24719.t1 0.7726388538844329 56 Cpa|evm.model.tig00020516.18 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL10 | mtRPL10 component tig00020516_g9966.t1 0.7720842969819851 57 Cpa|evm.model.tig00000792.56 tig00000792_g4206.t1 0.771652772047156 93 Cpa|evm.model.tig00000241.158 Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica tig00000241_g21024.t1 0.7697995353923539 81 Cpa|evm.model.tig00021350.20 External stimuli response.drought.stomatal closure signalling.CAU1 histone methylase tig00021350_g20637.t1 0.7693675311488487 85 Cpa|evm.model.tig00020965.10 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL23 component tig00020965_g16831.t1 0.7687339941082507 62 Cpa|evm.model.tig00000430.54 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.anthranilate synthase complex.alpha subunit tig00000430_g644.t1 0.7683716943510576 63 Cpa|evm.model.tig00020961.104 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component tig00020961_g16723.t1 0.766698048218834 73 Cpa|evm.model.tig00000737.17 1-aminocyclopropane-1-carboxylate synthase CMA101 OS=Cucurbita maxima tig00000737_g3796.t1 0.7662654265073024 66 Cpa|evm.model.tig00000718.51 tig00000718_g3725.t1 0.765821810563516 70 Cpa|evm.model.tig00020965.8 Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum tig00020965_g16829.t1 0.7643762067283892 84 Cpa|evm.model.tig00000128.7 tig00000128_g7207.t1 0.7629433279626024 70 Cpa|evm.model.tig00000093.43 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3e component tig00000093_g3479.t1 0.7610521528660209 74 Cpa|evm.model.tig00021532.17 tig00021532_g22197.t1 0.7597880181727604 98 Cpa|evm.model.tig00000093.10 Cold shock protein 1 OS=Arabidopsis thaliana tig00000093_g3449.t1 0.75962462505802 73 Cpa|evm.model.tig00000404.14 tig00000404_g378.t1 0.7531947906782708 78 Cpa|evm.model.tig00020801.13 tig00020801_g13897.t1 0.744396537642394 88 Cpa|evm.model.tig00000741.6 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.dihydroxy-acid dehydratase tig00000741_g3826.t1 0.740384065546842 94 Cpa|evm.model.tig00000378.15 Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana tig00000378_g24507.t1 0.7350688078454224 100