Sequence Description Alias PCC hrr Cpa|evm.model.tig00020554.99 Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease tig00020554_g10877.t2 0.8766105107545692 2 Cpa|evm.model.tig00001384.5 Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica tig00001384_g8554.t1 0.8741634808107496 7 Cpa|evm.model.tig00000459.16 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase tig00000459_g1078.t1 0.8656707302788168 5 Cpa|evm.model.tig00001628.7 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase regulatory protein tig00001628_g9434.t1 0.8584472483042811 7 Cpa|evm.model.tig00000852.9 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RS31/40/41 splicing factor tig00000852_g5022.t1 0.855187940503839 5 Cpa|evm.model.tig00000480.60 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm4 component tig00000480_g1327.t1 0.8536229626528471 20 Cpa|evm.model.tig00000718.62 tig00000718_g3734.t1 0.8518629324261904 7 Cpa|evm.model.tig00021014.9 tig00021014_g17091.t1 0.8444981396518477 8 Cpa|evm.model.tig00000342.20 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component tig00000342_g24207.t1 0.8391941267075761 18 Cpa|evm.model.tig00001130.27 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana tig00001130_g7257.t1 0.8388370476745148 26 Cpa|evm.model.tig00000042.230 Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana tig00000042_g15629.t1 0.8356285968962667 29 Cpa|evm.model.tig00021179.9 tig00021179_g19224.t1 0.8330483710509715 12 Cpa|evm.model.tig00020934.39 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) receptor complex.SR-beta component tig00020934_g16107.t1 0.8316369230925238 13 Cpa|evm.model.tig00000269.111 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana tig00000269_g23773.t1 0.8298101484187912 32 Cpa|evm.model.tig00000194.40 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component tig00000194_g14768.t1 0.8270928249366868 53 Cpa|evm.model.tig00020703.21 tig00020703_g13123.t1 0.8259913956386131 18 Cpa|evm.model.tig00000169.18 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase tig00000169_g11887.t1 0.8210651265782706 37 Cpa|evm.model.tig00000057.120 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component tig00000057_g144.t1 0.8206360162264985 19 Cpa|evm.model.tig00020557.18 tig00020557_g11119.t1 0.8204500926174885 39 Cpa|evm.model.tig00000733.13 tig00000733_g3777.t1 0.8200224648199015 21 Cpa|evm.model.tig00001094.28 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG1 component tig00001094_g7000.t1 0.8095299482621635 22 Cpa|evm.model.tig00021357.33 Chloride channel protein CLC-d OS=Arabidopsis thaliana tig00021357_g20761.t1 0.807105746972038 98 Cpa|evm.model.tig00000383.29 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF9 component tig00000383_g24639.t1 0.8070074495863973 35 Cpa|evm.model.tig00021234.6 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ACA P2B-type calcium cation-transporting ATPase tig00021234_g19380.t1 0.8059832238033734 34 Cpa|evm.model.tig00001486.8 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone tig00001486_g8925.t1 0.8037147967489309 76 Cpa|evm.model.tig00020961.133 tig00020961_g16754.t1 0.8018639653147106 29 Cpa|evm.model.tig00001155.11 tig00001155_g7318.t1 0.8001822840255804 30 Cpa|evm.model.tig00000903.19 tig00000903_g5515.t1 0.7997828057297213 77 Cpa|evm.model.tig00000241.101 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit tig00000241_g20965.t1 0.7988092524687653 32 Cpa|evm.model.tig00001155.28 Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana tig00001155_g7334.t1 0.7983507457380278 75 Cpa|evm.model.tig00001128.5 tig00001128_g7171.t1 0.7973075888300079 34 Cpa|evm.model.tig00000396.9 Solute transport.primary active transport.VHP PPase family.VHP2 proton-translocating pyrophosphatase tig00021621_g22977.t1 0.7906925076756454 35 Cpa|evm.model.tig00020912.80 tig00020912_g15850.t1 0.7906864289153677 43 Cpa|evm.model.tig00000718.39 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 8 tig00000718_g3714.t1 0.7899924759191129 100 Cpa|evm.model.tig00000241.109 Anoctamin-like protein Os01g0706700 OS=Oryza sativa subsp. japonica tig00000241_g20975.t1 0.7895460091372069 67 Cpa|evm.model.tig00021582.13 RNA processing.RNA 3-end polyadenylation.Cleavage Factor I (CF-Im) complex.CPFS6/CFIm68 component tig00021582_g22610.t1 0.7842318941123427 73 Cpa|evm.model.tig00021617.13 Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 OS=Arabidopsis thaliana tig00021617_g22940.t1 0.7841788381010374 80 Cpa|evm.model.tig00001525.10 Protein GID8 homolog OS=Arabidopsis thaliana tig00001525_g9240.t1 0.7834371112916714 42 Cpa|evm.model.tig00021428.16 Probable tyrosine-protein phosphatase DSP4 OS=Arabidopsis thaliana tig00021428_g21158.t1 0.7806147027409233 42 Cpa|evm.model.tig00000984.27 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana tig00000984_g6004.t1 0.7797664696384075 44 Cpa|evm.model.tig00000498.17 tig00000498_g1593.t1 0.7795278125112671 81 Cpa|evm.model.tig00000241.143 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 196.5) & Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 OS=Arabidopsis thaliana tig00000241_g21008.t1 0.7769806541745492 63 Cpa|evm.model.tig00001095.21 tig00001095_g7038.t1 0.7757018343507809 49 Cpa|evm.model.tig00001154.10 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor tig00001154_g7273.t1 0.7723563046062274 74 Cpa|evm.model.tig00000144.152 Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica tig00000144_g9146.t1 0.772131948356115 95 Cpa|evm.model.tig00020961.101 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.TRS31 component tig00020961_g16720.t1 0.7702712489446071 54 Cpa|evm.model.tig00001154.12 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst tig00001154_g7275.t1 0.7691042104159425 56 Cpa|evm.model.tig00020830.66 Protein modification.phosphorylation.STE kinase superfamily.MAPKK kinase tig00020830_g14449.t1 0.7650450268889089 82 Cpa|evm.model.tig00001093.11 Protein modification.phosphorylation.CMGC kinase superfamily.GSK kinase tig00001093_g6886.t1 0.7647902760227261 60 Cpa|evm.model.tig00001501.1 tig00001501_g9217.t1 0.7643437078297706 61 Cpa|evm.model.tig00000396.25 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component tig00000396_g24896.t1 0.7634229916826061 62 Cpa|evm.model.tig00001234.22 tig00001234_g7744.t1 0.7615805142348289 65 Cpa|evm.model.tig00000829.2 tig00000525_g1950.t1 0.759086041956193 67 Cpa|evm.model.tig00021463.4 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-B component tig00021463_g21613.t1 0.7568701106730743 70 Cpa|evm.model.tig00020816.68 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP62 nucleoporin tig00020816_g14156.t1 0.7564942581328064 71 Cpa|evm.model.tig00020537.47 tig00020537_g10269.t1 0.7560024677281185 72 Cpa|evm.model.tig00000704.20 Protein biosynthesis.translation elongation.diphthamide-modification of eEF2.DPH2 diphthamide synthesis protein tig00000704_g3310.t1 0.7559023598725669 90 Cpa|evm.model.tig00021293.31 tig00021293_g20023.t2 0.7547586582748744 74 Cpa|evm.model.tig00000949.9 tig00000949_g5720.t1 0.7534976764570008 76 Cpa|evm.model.tig00000140.5 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALIS regulatory component tig00000140_g8462.t1 0.7499891225800529 84 Cpa|evm.model.tig00000821.7 tig00000821_g4466.t1 0.7439410461387981 87 Cpa|evm.model.tig00000411.32 tig00000411_g535.t1 0.7431316514210101 88 Cpa|evm.model.tig00000870.3 tig00000870_g5121.t1 0.7374346229382013 97 Cpa|evm.model.tig00000808.46 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00000808_g4432.t1 0.7370066718750727 98